RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 EYA2O00167 538 aa22.11■■□□□ 1.13
CLK1-205ENST00000434813 LARP1BQ659C4 914 aaKnown RBP22.11■■□□□ 1.13
CLK1-205ENST00000434813 FAM184AQ8NB25 1140 aa22.11■■□□□ 1.13
CLK1-205ENST00000434813 RNF214Q8ND24 703 aa22.11■■□□□ 1.13
CLK1-205ENST00000434813 NEK1Q96PY6 1258 aa22.11■■□□□ 1.13
CLK1-205ENST00000434813 CCDC129Q6ZRS4 1044 aa22.1■■□□□ 1.13
CLK1-205ENST00000434813 SEC62Q99442 399 aaKnown RBP22.1■■□□□ 1.13
CLK1-205ENST00000434813 ISCA1Q9BUE6 129 aa22.1■■□□□ 1.13
CLK1-205ENST00000434813 PAG1Q9NWQ8 432 aa22.1■■□□□ 1.13
CLK1-205ENST00000434813 PLCH1Q4KWH8 1693 aa22.09■■□□□ 1.13
CLK1-205ENST00000434813 CHGBP05060 677 aa22.09■■□□□ 1.13
CLK1-205ENST00000434813 CDCA7Q9BWT1 371 aaPredicted RBP22.09■■□□□ 1.13
CLK1-205ENST00000434813 HELLSQ9NRZ9 838 aa22.09■■□□□ 1.13
CLK1-205ENST00000434813 SPATA31A6Q5VVP1 1343 aa22.08■■□□□ 1.13
CLK1-205ENST00000434813 DTNBO60941 627 aa22.08■■□□□ 1.13
CLK1-205ENST00000434813 CYP21A2P08686 494 aa22.08■■□□□ 1.13
CLK1-205ENST00000434813 CDC37L1Q7L3B6 337 aa22.08■■□□□ 1.13
CLK1-205ENST00000434813 NEUROD6Q96NK8 337 aa22.08■■□□□ 1.13
CLK1-205ENST00000434813 GOLIM4O00461 696 aa22.07■■□□□ 1.12
CLK1-205ENST00000434813 MSNP26038 577 aaKnown RBP22.07■■□□□ 1.12
CLK1-205ENST00000434813 NOL7Q9UMY1 257 aaKnown RBP22.07■■□□□ 1.12
CLK1-205ENST00000434813 THRAP3Q9Y2W1 955 aaKnown RBP22.07■■□□□ 1.12
CLK1-205ENST00000434813 LRRC24Q50LG9 513 aa22.07■■□□□ 1.12
CLK1-205ENST00000434813 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.07■■□□□ 1.12
CLK1-205ENST00000434813 GTF3C6Q969F1 213 aa22.07■■□□□ 1.12
CLK1-205ENST00000434813 DSCC1Q9BVC3 393 aa22.06■■□□□ 1.12
CLK1-205ENST00000434813 LAMA4Q16363 1823 aa22.06■■□□□ 1.12
CLK1-205ENST00000434813 ELP1O95163 1332 aa22.06■■□□□ 1.12
CLK1-205ENST00000434813 SPATA31A1Q5TZJ5 1347 aa22.06■■□□□ 1.12
CLK1-205ENST00000434813 A0A1B0GUL7 405 aa22.06■■□□□ 1.12
CLK1-205ENST00000434813 TIMM10P62072 90 aa22.06■■□□□ 1.12
CLK1-205ENST00000434813 KRT85P78386 507 aa22.06■■□□□ 1.12
CLK1-205ENST00000434813 TRIM28Q13263 835 aaKnown RBP22.06■■□□□ 1.12
CLK1-205ENST00000434813 TCIRG1Q13488 830 aa22.06■■□□□ 1.12
CLK1-205ENST00000434813 UVSSAQ2YD98 709 aa22.06■■□□□ 1.12
CLK1-205ENST00000434813 ZMYM1Q5SVZ6 1142 aa22.06■■□□□ 1.12
CLK1-205ENST00000434813 FBXO3Q9UK99 471 aa22.06■■□□□ 1.12
CLK1-205ENST00000434813 VSIG10Q8N0Z9 540 aa22.05■■□□□ 1.12
CLK1-205ENST00000434813 ZNF594Q96JF6 807 aaPredicted RBP22.05■■□□□ 1.12
CLK1-205ENST00000434813 HMGB1P09429 215 aaKnown RBP22.04■■□□□ 1.12
CLK1-205ENST00000434813 PIGBQ92521 554 aa22.04■■□□□ 1.12
CLK1-205ENST00000434813 TEX13AQ9BXU3 409 aaPredicted RBP22.04■■□□□ 1.12
CLK1-205ENST00000434813 CCDC9Q9Y3X0 531 aaKnown RBP22.04■■□□□ 1.12
CLK1-205ENST00000434813 Q6ZUG5 572 aa22.04■■□□□ 1.12
CLK1-205ENST00000434813 NAP1L5Q96NT1 182 aaPredicted RBP22.04■■□□□ 1.12
CLK1-205ENST00000434813 CCDC39Q9UFE4 941 aa22.04■■□□□ 1.12
CLK1-205ENST00000434813 IFIT1P09914 478 aaKnown RBP22.03■■□□□ 1.12
CLK1-205ENST00000434813 STK3Q13188 491 aa22.03■■□□□ 1.12
CLK1-205ENST00000434813 PLA2G12BQ9BX93 195 aa22.03■■□□□ 1.12
CLK1-205ENST00000434813 STOX1Q6ZVD7 989 aa22.02■■□□□ 1.12
CLK1-205ENST00000434813 TTC6Q86TZ1 520 aa22.02■■□□□ 1.12
CLK1-205ENST00000434813 PUS3Q9BZE2 481 aaKnown RBP22.02■■□□□ 1.12
CLK1-205ENST00000434813 PCCAP05165 728 aaPredicted RBP22.02■■□□□ 1.12
CLK1-205ENST00000434813 MCM5P33992 734 aa22.02■■□□□ 1.12
CLK1-205ENST00000434813 DDB1Q16531 1140 aa22.02■■□□□ 1.12
CLK1-205ENST00000434813 CCDC57Q2TAC2 916 aa22.02■■□□□ 1.12
CLK1-205ENST00000434813 FERMT3Q86UX7 667 aa22.02■■□□□ 1.12
CLK1-205ENST00000434813 FUCA2Q9BTY2 467 aa22.02■■□□□ 1.12
CLK1-205ENST00000434813 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.02■■□□□ 1.12
CLK1-205ENST00000434813 CEP126Q9P2H0 1117 aa22.02■■□□□ 1.12
CLK1-205ENST00000434813 ASAP1Q9ULH1 1129 aa22.02■■□□□ 1.12
CLK1-205ENST00000434813 NRAPQ86VF7 1730 aa22.02■■□□□ 1.12
CLK1-205ENST00000434813 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.02■■□□□ 1.12
CLK1-205ENST00000434813 ITGB4P16144 1822 aa22.02■■□□□ 1.11
CLK1-205ENST00000434813 KIF6Q6ZMV9 814 aa22.01■■□□□ 1.11
CLK1-205ENST00000434813 ZKSCAN5Q9Y2L8 839 aa22.01■■□□□ 1.11
CLK1-205ENST00000434813 MAST3O60307 1309 aa22.01■■□□□ 1.11
CLK1-205ENST00000434813 LRP6O75581 1613 aa22.01■■□□□ 1.11
CLK1-205ENST00000434813 RNF113AO15541 343 aaKnown RBP22.01■■□□□ 1.11
CLK1-205ENST00000434813 ZNF500O60304 480 aaPredicted RBP22.01■■□□□ 1.11
CLK1-205ENST00000434813 SYTL4Q96C24 671 aaPredicted RBP22.01■■□□□ 1.11
CLK1-205ENST00000434813 HSP90B1P14625 803 aaKnown RBP22■■□□□ 1.11
CLK1-205ENST00000434813 DHX32Q7L7V1 743 aaKnown RBP22■■□□□ 1.11
CLK1-205ENST00000434813 DNAJC10Q8IXB1 793 aa22■■□□□ 1.11
CLK1-205ENST00000434813 SCAND2PQ9GZW5 306 aaPredicted RBP22■■□□□ 1.11
CLK1-205ENST00000434813 SPATA31A5Q5VU36 1347 aa22■■□□□ 1.11
CLK1-205ENST00000434813 SPATA31A7Q8IWB4 1347 aa22■■□□□ 1.11
CLK1-205ENST00000434813 SLIT2O94813 1529 aa22■■□□□ 1.11
CLK1-205ENST00000434813 WNK3Q9BYP7 1800 aa22■■□□□ 1.11
CLK1-205ENST00000434813 JAK2O60674 1132 aa21.99■■□□□ 1.11
CLK1-205ENST00000434813 HSPD1P10809 573 aaKnown RBP21.99■■□□□ 1.11
CLK1-205ENST00000434813 MEX3CQ5U5Q3 659 aaKnown RBP21.99■■□□□ 1.11
CLK1-205ENST00000434813 BRF1Q92994 677 aa21.99■■□□□ 1.11
CLK1-205ENST00000434813 AGXT2Q9BYV1 514 aa21.99■■□□□ 1.11
CLK1-205ENST00000434813 AKAP2Q9Y2D5 859 aa21.99■■□□□ 1.11
CLK1-205ENST00000434813 BCL9O00512 1426 aa21.99■■□□□ 1.11
CLK1-205ENST00000434813 ABCC12Q96J65 1359 aa21.99■■□□□ 1.11
CLK1-205ENST00000434813 SLFNL1Q499Z3 407 aa21.99■■□□□ 1.11
CLK1-205ENST00000434813 ZBTB38Q8NAP3 1195 aaPredicted RBP21.99■■□□□ 1.11
CLK1-205ENST00000434813 SMARCC2Q8TAQ2 1214 aa21.99■■□□□ 1.11
CLK1-205ENST00000434813 LLPHQ9BRT6 129 aaKnown RBP21.99■■□□□ 1.11
CLK1-205ENST00000434813 ANKRD36CQ5JPF3 1778 aa21.98■■□□□ 1.11
CLK1-205ENST00000434813 NWD2Q9ULI1 1742 aa21.98■■□□□ 1.11
CLK1-205ENST00000434813 PFKFB2O60825 505 aa21.98■■□□□ 1.11
CLK1-205ENST00000434813 STARD3NLO95772 234 aa21.98■■□□□ 1.11
CLK1-205ENST00000434813 CSF1RP07333 972 aa21.98■■□□□ 1.11
CLK1-205ENST00000434813 HCLS1P14317 486 aaPredicted RBP21.98■■□□□ 1.11
CLK1-205ENST00000434813 TPRNQ4KMQ1 711 aa21.98■■□□□ 1.11
CLK1-205ENST00000434813 ZNF330Q9Y3S2 320 aaPredicted RBP21.98■■□□□ 1.11
CLK1-205ENST00000434813 RIC1Q4ADV7 1423 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms