RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 SAFB2Q14151 953 aaKnown RBP eCLIP6.93□□□□□ -1.3
HMGB3P10-201ENST00000434734 TAF1CQ15572 869 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P10-201ENST00000434734 NFE2Q16621 373 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P10-201ENST00000434734 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.93□□□□□ -1.3
HMGB3P10-201ENST00000434734 ZBTB33Q86T24 672 aa6.93□□□□□ -1.3
HMGB3P10-201ENST00000434734 ZNF775Q96BV0 537 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P10-201ENST00000434734 ARPC5LQ9BPX5 153 aa6.93□□□□□ -1.3
HMGB3P10-201ENST00000434734 SPON2Q9BUD6 331 aa6.93□□□□□ -1.3
HMGB3P10-201ENST00000434734 TMX1Q9H3N1 280 aa6.93□□□□□ -1.3
HMGB3P10-201ENST00000434734 GINM1Q9NU53 330 aa6.93□□□□□ -1.3
HMGB3P10-201ENST00000434734 KBTBD4Q9NVX7 518 aa6.93□□□□□ -1.3
HMGB3P10-201ENST00000434734 TMEM260Q9NX78 707 aa6.93□□□□□ -1.3
HMGB3P10-201ENST00000434734 LRFN2Q9ULH4 789 aa6.93□□□□□ -1.3
HMGB3P10-201ENST00000434734 PCDHB11Q9Y5F2 797 aa6.93□□□□□ -1.3
HMGB3P10-201ENST00000434734 KIF3BO15066 747 aa6.92□□□□□ -1.3
HMGB3P10-201ENST00000434734 EXOSC10Q01780 885 aaKnown RBP6.92□□□□□ -1.3
HMGB3P10-201ENST00000434734 LMOD3Q0VAK6 560 aa6.92□□□□□ -1.3
HMGB3P10-201ENST00000434734 C16orf86Q6ZW13 317 aa6.92□□□□□ -1.3
HMGB3P10-201ENST00000434734 CELF2-AS1Q8N7Q2 184 aa6.92□□□□□ -1.3
HMGB3P10-201ENST00000434734 RELTQ969Z4 430 aa6.92□□□□□ -1.3
HMGB3P10-201ENST00000434734 FEZ1Q99689 392 aa6.92□□□□□ -1.3
HMGB3P10-201ENST00000434734 CARD14Q9BXL6 1004 aa6.92□□□□□ -1.3
HMGB3P10-201ENST00000434734 ARNT2Q9HBZ2 717 aa6.92□□□□□ -1.3
HMGB3P10-201ENST00000434734 ADAMTS1Q9UHI8 967 aa6.92□□□□□ -1.3
HMGB3P10-201ENST00000434734 CDV3Q9UKY7 258 aaKnown RBP6.92□□□□□ -1.3
HMGB3P10-201ENST00000434734 F6X3S4 739 aa6.91□□□□□ -1.3
HMGB3P10-201ENST00000434734 PLIN1O60240 522 aa6.91□□□□□ -1.3
HMGB3P10-201ENST00000434734 NOS2P35228 1153 aa6.91□□□□□ -1.3
HMGB3P10-201ENST00000434734 GRM5P41594 1212 aa6.91□□□□□ -1.3
HMGB3P10-201ENST00000434734 DNM1Q05193 864 aaKnown RBP6.91□□□□□ -1.3
HMGB3P10-201ENST00000434734 USP4Q13107 963 aa6.91□□□□□ -1.3
HMGB3P10-201ENST00000434734 ARID5BQ14865 1188 aa6.91□□□□□ -1.3
HMGB3P10-201ENST00000434734 LRP10Q7Z4F1 713 aa6.91□□□□□ -1.3
HMGB3P10-201ENST00000434734 EDEM1Q92611 657 aa6.91□□□□□ -1.3
HMGB3P10-201ENST00000434734 SENP7Q9BQF6 1050 aa6.91□□□□□ -1.3
HMGB3P10-201ENST00000434734 KLF16Q9BXK1 252 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P10-201ENST00000434734 FBXO9Q9UK97 447 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P10-201ENST00000434734 ATP8A1Q9Y2Q0 1164 aa6.91□□□□□ -1.3
HMGB3P10-201ENST00000434734 MSRB2Q9Y3D2 182 aa6.91□□□□□ -1.3
HMGB3P10-201ENST00000434734 MAGEB6P1A0A0J9YX57 407 aa6.9□□□□□ -1.3
HMGB3P10-201ENST00000434734 KCNQ2O43526 872 aa6.9□□□□□ -1.3
HMGB3P10-201ENST00000434734 ALDH1L1O75891 902 aa6.9□□□□□ -1.3
HMGB3P10-201ENST00000434734 BPNT1O95861 308 aa6.9□□□□□ -1.3
HMGB3P10-201ENST00000434734 PDGFAP04085 211 aa6.9□□□□□ -1.3
HMGB3P10-201ENST00000434734 IRS1P35568 1242 aa6.9□□□□□ -1.3
HMGB3P10-201ENST00000434734 USP5P45974 858 aa6.9□□□□□ -1.3
HMGB3P10-201ENST00000434734 EPHA4P54764 986 aa6.9□□□□□ -1.3
HMGB3P10-201ENST00000434734 OS9Q13438 667 aaPredicted RBP6.9□□□□□ -1.3
HMGB3P10-201ENST00000434734 TTF1Q15361 905 aaPredicted RBP6.9□□□□□ -1.3
HMGB3P10-201ENST00000434734 NBPF20Q3BBV1 942 aa6.9□□□□□ -1.3
HMGB3P10-201ENST00000434734 DALRD3Q5D0E6 543 aaKnown RBP6.9□□□□□ -1.3
HMGB3P10-201ENST00000434734 TTC39BQ5VTQ0 682 aaPredicted RBP6.9□□□□□ -1.3
HMGB3P10-201ENST00000434734 KRT26Q7Z3Y9 468 aa6.9□□□□□ -1.3
HMGB3P10-201ENST00000434734 KIAA0825Q8IV33 1275 aa6.9□□□□□ -1.3
HMGB3P10-201ENST00000434734 ANAPC16Q96DE5 110 aa6.9□□□□□ -1.3
HMGB3P10-201ENST00000434734 NAP1L5Q96NT1 182 aaPredicted RBP6.9□□□□□ -1.3
HMGB3P10-201ENST00000434734 KAT6BQ8WYB5 2073 aa6.89□□□□□ -1.31
HMGB3P10-201ENST00000434734 IFRD1O00458 451 aaPredicted RBP6.89□□□□□ -1.31
HMGB3P10-201ENST00000434734 CAND2O75155 1236 aa6.89□□□□□ -1.31
HMGB3P10-201ENST00000434734 SCGB1D2O95969 90 aa6.89□□□□□ -1.31
HMGB3P10-201ENST00000434734 USP17L7P0C7H9 530 aa6.89□□□□□ -1.31
HMGB3P10-201ENST00000434734 TIMP2P16035 220 aa6.89□□□□□ -1.31
HMGB3P10-201ENST00000434734 WDR4P57081 412 aaKnown RBP6.89□□□□□ -1.31
HMGB3P10-201ENST00000434734 C21orf62-AS1Q17RA5 79 aa6.89□□□□□ -1.31
HMGB3P10-201ENST00000434734 ERFEQ4G0M1 354 aa6.89□□□□□ -1.31
HMGB3P10-201ENST00000434734 TBCELQ5QJ74 424 aa6.89□□□□□ -1.31
HMGB3P10-201ENST00000434734 FAM43BQ6ZT52 329 aaPredicted RBP6.89□□□□□ -1.31
HMGB3P10-201ENST00000434734 VASH1Q7L8A9 365 aaPredicted RBP6.89□□□□□ -1.31
HMGB3P10-201ENST00000434734 C14orf80Q86SX3 495 aa6.89□□□□□ -1.31
HMGB3P10-201ENST00000434734 ABTB2Q8N961 1025 aa6.89□□□□□ -1.31
HMGB3P10-201ENST00000434734 EAF1Q96JC9 268 aaPredicted RBP6.89□□□□□ -1.31
HMGB3P10-201ENST00000434734 TMX4Q9H1E5 349 aaPredicted RBP6.89□□□□□ -1.31
HMGB3P10-201ENST00000434734 PRKAG3Q9UGI9 489 aa6.89□□□□□ -1.31
HMGB3P10-201ENST00000434734 SHTN1A0MZ66 631 aa6.88□□□□□ -1.31
HMGB3P10-201ENST00000434734 A6NHS1 94 aa6.88□□□□□ -1.31
HMGB3P10-201ENST00000434734 WASLO00401 505 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P10-201ENST00000434734 PPP1R12BO60237 982 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P10-201ENST00000434734 KRT18P05783 430 aaKnown RBP6.88□□□□□ -1.31
HMGB3P10-201ENST00000434734 SNRPBP14678 240 aaKnown RBP6.88□□□□□ -1.31
HMGB3P10-201ENST00000434734 CNGA1P29973 690 aa6.88□□□□□ -1.31
HMGB3P10-201ENST00000434734 SCTRP47872 440 aa6.88□□□□□ -1.31
HMGB3P10-201ENST00000434734 ST13P50502 369 aaKnown RBP6.88□□□□□ -1.31
HMGB3P10-201ENST00000434734 PPP2R5AQ15172 486 aa6.88□□□□□ -1.31
HMGB3P10-201ENST00000434734 USPL1Q5W0Q7 1092 aa6.88□□□□□ -1.31
HMGB3P10-201ENST00000434734 PPP4R4Q6NUP7 873 aa6.88□□□□□ -1.31
HMGB3P10-201ENST00000434734 TRIM46Q7Z4K8 759 aa6.88□□□□□ -1.31
HMGB3P10-201ENST00000434734 DDX42Q86XP3 938 aaKnown RBP eCLIP6.88□□□□□ -1.31
HMGB3P10-201ENST00000434734 AMOTL1Q8IY63 956 aa6.88□□□□□ -1.31
HMGB3P10-201ENST00000434734 CNPY4Q8N129 248 aa6.88□□□□□ -1.31
HMGB3P10-201ENST00000434734 AVENQ9NQS1 362 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P10-201ENST00000434734 MAP3K20Q9NYL2 800 aaKnown RBP6.88□□□□□ -1.31
HMGB3P10-201ENST00000434734 SMAD7O15105 426 aaKnown RBP6.87□□□□□ -1.31
HMGB3P10-201ENST00000434734 FGAP02671 866 aa6.87□□□□□ -1.31
HMGB3P10-201ENST00000434734 NR3C2P08235 984 aa6.87□□□□□ -1.31
HMGB3P10-201ENST00000434734 SOX9P48436 509 aa6.87□□□□□ -1.31
HMGB3P10-201ENST00000434734 SCNN1DP51172 638 aa6.87□□□□□ -1.31
HMGB3P10-201ENST00000434734 HDAC1Q13547 482 aaPredicted RBP6.87□□□□□ -1.31
HMGB3P10-201ENST00000434734 SCARF1Q14162 830 aa6.87□□□□□ -1.31
HMGB3P10-201ENST00000434734 C10orf62Q5T681 223 aaPredicted RBP6.87□□□□□ -1.31
HMGB3P10-201ENST00000434734 WDR78Q5VTH9 848 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms