RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 PHRF1Q9P1Y6 1649 aaKnown RBP6.84□□□□□ -1.31
RFC3-202ENST00000434425 GCP02774 474 aa6.84□□□□□ -1.31
RFC3-202ENST00000434425 COL6A1P12109 1028 aa6.84□□□□□ -1.31
RFC3-202ENST00000434425 CLK2P49760 499 aaKnown RBP6.84□□□□□ -1.31
RFC3-202ENST00000434425 MARSP56192 900 aaKnown RBP6.84□□□□□ -1.31
RFC3-202ENST00000434425 PROX2Q3B8N5 592 aa6.84□□□□□ -1.31
RFC3-202ENST00000434425 PPP4R3BQ5MIZ7 849 aa6.84□□□□□ -1.31
RFC3-202ENST00000434425 NT5DC4Q86YG4 428 aa6.84□□□□□ -1.31
RFC3-202ENST00000434425 ENOX1Q8TC92 643 aaKnown RBP6.84□□□□□ -1.31
RFC3-202ENST00000434425 STAG1Q8WVM7 1258 aa6.84□□□□□ -1.31
RFC3-202ENST00000434425 TMEM51Q9NW97 253 aa6.84□□□□□ -1.31
RFC3-202ENST00000434425 CENPJQ9HC77 1338 aaPredicted RBP6.84□□□□□ -1.31
RFC3-202ENST00000434425 SBF2Q86WG5 1849 aa6.84□□□□□ -1.32
RFC3-202ENST00000434425 ATP7BP35670 1465 aa6.83□□□□□ -1.32
RFC3-202ENST00000434425 TONSLQ96HA7 1378 aa6.83□□□□□ -1.32
RFC3-202ENST00000434425 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.83□□□□□ -1.32
RFC3-202ENST00000434425 PLSCR1O15162 318 aa6.83□□□□□ -1.32
RFC3-202ENST00000434425 GIGYF1O75420 1035 aaPredicted RBP6.83□□□□□ -1.32
RFC3-202ENST00000434425 CD46P15529 392 aa6.83□□□□□ -1.32
RFC3-202ENST00000434425 CD53P19397 219 aa6.83□□□□□ -1.32
RFC3-202ENST00000434425 ERCC5P28715 1186 aaPredicted RBP6.83□□□□□ -1.32
RFC3-202ENST00000434425 LMOD3Q0VAK6 560 aa6.83□□□□□ -1.32
RFC3-202ENST00000434425 NEXNQ0ZGT2 675 aa6.83□□□□□ -1.32
RFC3-202ENST00000434425 HSP90AA2PQ14568 343 aaPredicted RBP6.83□□□□□ -1.32
RFC3-202ENST00000434425 SVIPQ8NHG7 77 aa6.83□□□□□ -1.32
RFC3-202ENST00000434425 IL17RAQ96F46 866 aa6.83□□□□□ -1.32
RFC3-202ENST00000434425 SLC39A13Q96H72 371 aa6.83□□□□□ -1.32
RFC3-202ENST00000434425 TMX4Q9H1E5 349 aaPredicted RBP6.83□□□□□ -1.32
RFC3-202ENST00000434425 PNMA3Q9UL41 463 aa6.83□□□□□ -1.32
RFC3-202ENST00000434425 THRAP3Q9Y2W1 955 aaKnown RBP6.83□□□□□ -1.32
RFC3-202ENST00000434425 POLR3AO14802 1390 aaPredicted RBP6.82□□□□□ -1.32
RFC3-202ENST00000434425 POTEB3A0JP26 581 aa6.82□□□□□ -1.32
RFC3-202ENST00000434425 FAM205CA6NFA0 338 aa6.82□□□□□ -1.32
RFC3-202ENST00000434425 TRIM6-TRIM34B2RNG4 842 aa6.82□□□□□ -1.32
RFC3-202ENST00000434425 PPP1R3GB7ZBB8 358 aa6.82□□□□□ -1.32
RFC3-202ENST00000434425 PRC1O43663 620 aa6.82□□□□□ -1.32
RFC3-202ENST00000434425 ZBTB7AO95365 584 aa6.82□□□□□ -1.32
RFC3-202ENST00000434425 FGAP02671 866 aa6.82□□□□□ -1.32
RFC3-202ENST00000434425 PEX19P40855 299 aa6.82□□□□□ -1.32
RFC3-202ENST00000434425 POU5F1BQ06416 359 aa6.82□□□□□ -1.32
RFC3-202ENST00000434425 ZKSCAN8Q15776 578 aaPredicted RBP6.82□□□□□ -1.32
RFC3-202ENST00000434425 POTEBQ6S5H4 581 aa6.82□□□□□ -1.32
RFC3-202ENST00000434425 PIK3R5Q8WYR1 880 aa6.82□□□□□ -1.32
RFC3-202ENST00000434425 TATDN2Q93075 761 aa6.82□□□□□ -1.32
RFC3-202ENST00000434425 ARMC5Q96C12 935 aa6.82□□□□□ -1.32
RFC3-202ENST00000434425 TRIM34Q9BYJ4 488 aa6.82□□□□□ -1.32
RFC3-202ENST00000434425 TANGO6Q9C0B7 1094 aa6.82□□□□□ -1.32
RFC3-202ENST00000434425 IFT122Q9HBG6 1241 aa6.82□□□□□ -1.32
RFC3-202ENST00000434425 PCDH12Q9NPG4 1184 aa6.82□□□□□ -1.32
RFC3-202ENST00000434425 SNRKQ9NRH2 765 aa6.82□□□□□ -1.32
RFC3-202ENST00000434425 GEMIN8Q9NWZ8 242 aaKnown RBP6.82□□□□□ -1.32
RFC3-202ENST00000434425 PUF60Q9UHX1 559 aaKnown RBP6.82□□□□□ -1.32
RFC3-202ENST00000434425 ITSN1Q15811 1721 aa6.82□□□□□ -1.32
RFC3-202ENST00000434425 CPDO75976 1380 aa6.81□□□□□ -1.32
RFC3-202ENST00000434425 NINLQ9Y2I6 1382 aa6.81□□□□□ -1.32
RFC3-202ENST00000434425 POM121CA8CG34 1229 aa6.81□□□□□ -1.32
RFC3-202ENST00000434425 DDX11L8A8MPP1 907 aa6.81□□□□□ -1.32
RFC3-202ENST00000434425 TIMM44O43615 452 aa6.81□□□□□ -1.32
RFC3-202ENST00000434425 HOXB1P14653 301 aaPredicted RBP6.81□□□□□ -1.32
RFC3-202ENST00000434425 PTPREP23469 700 aa6.81□□□□□ -1.32
RFC3-202ENST00000434425 RFC5P40937 340 aa6.81□□□□□ -1.32
RFC3-202ENST00000434425 DHX8Q14562 1220 aaKnown RBP6.81□□□□□ -1.32
RFC3-202ENST00000434425 GJC2Q5T442 439 aaPredicted RBP6.81□□□□□ -1.32
RFC3-202ENST00000434425 NLRP13Q86W25 1043 aa6.81□□□□□ -1.32
RFC3-202ENST00000434425 ZNF784Q8NCA9 323 aaPredicted RBP6.81□□□□□ -1.32
RFC3-202ENST00000434425 CASS4Q9NQ75 786 aa6.81□□□□□ -1.32
RFC3-202ENST00000434425 RAI14Q9P0K7 980 aa6.81□□□□□ -1.32
RFC3-202ENST00000434425 ARHGEF28Q8N1W1 1705 aaKnown RBP6.81□□□□□ -1.32
RFC3-202ENST00000434425 LMO7Q8WWI1 1683 aa6.81□□□□□ -1.32
RFC3-202ENST00000434425 PEAK1Q9H792 1746 aa6.8□□□□□ -1.32
RFC3-202ENST00000434425 PARP4Q9UKK3 1724 aaKnown RBP6.8□□□□□ -1.32
RFC3-202ENST00000434425 USP19O94966 1318 aa6.8□□□□□ -1.32
RFC3-202ENST00000434425 MOXD2PA6NHM9 499 aa6.8□□□□□ -1.32
RFC3-202ENST00000434425 FAM163BP0C2L3 166 aa6.8□□□□□ -1.32
RFC3-202ENST00000434425 NDUFV2P19404 249 aa6.8□□□□□ -1.32
RFC3-202ENST00000434425 UBE4AQ14139 1066 aa6.8□□□□□ -1.32
RFC3-202ENST00000434425 ZRSR2Q15696 482 aaKnown RBP6.8□□□□□ -1.32
RFC3-202ENST00000434425 DDB1Q16531 1140 aa6.8□□□□□ -1.32
RFC3-202ENST00000434425 CCDC174Q6PII3 467 aa6.8□□□□□ -1.32
RFC3-202ENST00000434425 RIC3Q7Z5B4 369 aa6.8□□□□□ -1.32
RFC3-202ENST00000434425 MPNDQ8N594 471 aa6.8□□□□□ -1.32
RFC3-202ENST00000434425 MARCH10Q8NA82 808 aaPredicted RBP6.8□□□□□ -1.32
RFC3-202ENST00000434425 CWC25Q9NXE8 425 aaPredicted RBP6.8□□□□□ -1.32
RFC3-202ENST00000434425 DDX56Q9NY93 547 aaKnown RBP6.8□□□□□ -1.32
RFC3-202ENST00000434425 SFMBT1Q9UHJ3 866 aa6.8□□□□□ -1.32
RFC3-202ENST00000434425 AXIN2Q9Y2T1 843 aa6.8□□□□□ -1.32
RFC3-202ENST00000434425 NRKQ7Z2Y5 1582 aa6.8□□□□□ -1.32
RFC3-202ENST00000434425 COL5A2P05997 1499 aaPredicted RBP6.8□□□□□ -1.32
RFC3-202ENST00000434425 C11orf95C9JLR9 678 aaPredicted RBP6.79□□□□□ -1.32
RFC3-202ENST00000434425 S100BP04271 92 aaPredicted RBP6.79□□□□□ -1.32
RFC3-202ENST00000434425 DNAJB2P25686 324 aa6.79□□□□□ -1.32
RFC3-202ENST00000434425 DDX10Q13206 875 aaKnown RBP6.79□□□□□ -1.32
RFC3-202ENST00000434425 MAPRE1Q15691 268 aaKnown RBP6.79□□□□□ -1.32
RFC3-202ENST00000434425 TOM1L2Q6ZVM7 507 aa6.79□□□□□ -1.32
RFC3-202ENST00000434425 JAZF1Q86VZ6 243 aa6.79□□□□□ -1.32
RFC3-202ENST00000434425 FMNL3Q8IVF7 1028 aa6.79□□□□□ -1.32
RFC3-202ENST00000434425 DRC7Q8IY82 874 aa6.79□□□□□ -1.32
RFC3-202ENST00000434425 PDILTQ8N807 584 aa6.79□□□□□ -1.32
RFC3-202ENST00000434425 AGBL1Q96MI9 1066 aa6.79□□□□□ -1.32
RFC3-202ENST00000434425 TINF2Q9BSI4 451 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms