RNA–Protein interactions for RNA: ENST00000431387.8

NF1-204, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-204ENST00000431387 FEZ1Q99689 392 aa16.03■□□□□ 0.16
NF1-204ENST00000431387 NUP62CLQ9H1M0 184 aa16.03■□□□□ 0.16
NF1-204ENST00000431387 HMG20BQ9P0W2 317 aa16.03■□□□□ 0.16
NF1-204ENST00000431387 MEGF6O75095 1541 aa16.03■□□□□ 0.16
NF1-204ENST00000431387 C1orf167Q5SNV9 1468 aa16.02■□□□□ 0.16
NF1-204ENST00000431387 PDCP20941 246 aa16.02■□□□□ 0.16
NF1-204ENST00000431387 DACT1Q9NYF0 836 aa16.02■□□□□ 0.16
NF1-204ENST00000431387 ATP5J2-PTCD1G3V325 749 aa16.02■□□□□ 0.15
NF1-204ENST00000431387 PTCD1O75127 700 aaKnown RBP16.02■□□□□ 0.15
NF1-204ENST00000431387 TPM3P06753 285 aa16.02■□□□□ 0.15
NF1-204ENST00000431387 SNRPA1P09661 255 aaKnown RBP16.02■□□□□ 0.15
NF1-204ENST00000431387 GTF2E1P29083 439 aaPredicted RBP16.02■□□□□ 0.15
NF1-204ENST00000431387 ARID5BQ14865 1188 aa16.02■□□□□ 0.15
NF1-204ENST00000431387 TSGA10IPQ3SY00 556 aa16.02■□□□□ 0.15
NF1-204ENST00000431387 ZSCAN25Q6NSZ9 544 aa16.02■□□□□ 0.15
NF1-204ENST00000431387 SCN11AQ9UI33 1791 aa16.02■□□□□ 0.15
NF1-204ENST00000431387 USPL1Q5W0Q7 1092 aa16.01■□□□□ 0.15
NF1-204ENST00000431387 IFNL2Q8IZJ0 200 aa16.01■□□□□ 0.15
NF1-204ENST00000431387 TTC5Q8N0Z6 440 aa16.01■□□□□ 0.15
NF1-204ENST00000431387 CACTINQ8WUQ7 758 aaKnown RBP16.01■□□□□ 0.15
NF1-204ENST00000431387 DDX17Q92841 729 aaKnown RBP16.01■□□□□ 0.15
NF1-204ENST00000431387 DNAJC2Q99543 621 aaKnown RBP16.01■□□□□ 0.15
NF1-204ENST00000431387 TPD52L1Q16890 204 aaPredicted RBP16.01■□□□□ 0.15
NF1-204ENST00000431387 CCDC144BQ3MJ40 725 aa16.01■□□□□ 0.15
NF1-204ENST00000431387 CCDC129Q6ZRS4 1044 aa16.01■□□□□ 0.15
NF1-204ENST00000431387 CCDC144CPQ8IYA2 1237 aa16.01■□□□□ 0.15
NF1-204ENST00000431387 SEC62Q99442 399 aaKnown RBP16.01■□□□□ 0.15
NF1-204ENST00000431387 DBNDD2Q9BQY9 259 aa16.01■□□□□ 0.15
NF1-204ENST00000431387 SMTNL1A8MU46 457 aa16.01■□□□□ 0.15
NF1-204ENST00000431387 PDIA4P13667 645 aaKnown RBP16.01■□□□□ 0.15
NF1-204ENST00000431387 CCDC112Q8NEF3 446 aa16.01■□□□□ 0.15
NF1-204ENST00000431387 USP27XA6NNY8 438 aa16■□□□□ 0.15
NF1-204ENST00000431387 CSB-PGBD3P0DP91 1061 aa16■□□□□ 0.15
NF1-204ENST00000431387 RABL6Q3YEC7 729 aaPredicted RBP16■□□□□ 0.15
NF1-204ENST00000431387 TNMDQ9H2S6 317 aa16■□□□□ 0.15
NF1-204ENST00000431387 ELP1O95163 1332 aa16■□□□□ 0.15
NF1-204ENST00000431387 A0A087WZG4 1122 aa16■□□□□ 0.15
NF1-204ENST00000431387 NPHP1O15259 732 aa16■□□□□ 0.15
NF1-204ENST00000431387 CYP27B1O15528 508 aa16■□□□□ 0.15
NF1-204ENST00000431387 KLHL34Q8N239 644 aa16■□□□□ 0.15
NF1-204ENST00000431387 DDX41Q9UJV9 622 aaKnown RBP16■□□□□ 0.15
NF1-204ENST00000431387 ZNF609O15014 1411 aa15.99■□□□□ 0.15
NF1-204ENST00000431387 JAK2O60674 1132 aa15.99■□□□□ 0.15
NF1-204ENST00000431387 SLFN14P0C7P3 912 aa15.99■□□□□ 0.15
NF1-204ENST00000431387 ZNF75DP51815 510 aa15.99■□□□□ 0.15
NF1-204ENST00000431387 NEK1Q96PY6 1258 aa15.99■□□□□ 0.15
NF1-204ENST00000431387 DNAJC25Q9H1X3 360 aa15.99■□□□□ 0.15
NF1-204ENST00000431387 ST7Q9NRC1 585 aa15.99■□□□□ 0.15
NF1-204ENST00000431387 KRT32Q14532 448 aa15.99■□□□□ 0.15
NF1-204ENST00000431387 CABLES1Q8TDN4 633 aa15.99■□□□□ 0.15
NF1-204ENST00000431387 FMNL2Q96PY5 1086 aa15.99■□□□□ 0.15
NF1-204ENST00000431387 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.99■□□□□ 0.154e-7■■■□□ 17.6
NF1-204ENST00000431387 CCDC9Q9Y3X0 531 aaKnown RBP15.99■□□□□ 0.15
NF1-204ENST00000431387 VGLL3A8MV65 326 aa15.98■□□□□ 0.15
NF1-204ENST00000431387 DDX46Q7L014 1031 aaKnown RBP15.98■□□□□ 0.15
NF1-204ENST00000431387 DCAF5Q96JK2 942 aa15.98■□□□□ 0.15
NF1-204ENST00000431387 C19orf44Q9H6X5 657 aa15.98■□□□□ 0.15
NF1-204ENST00000431387 A0A087WWV3 80 aa15.98■□□□□ 0.15
NF1-204ENST00000431387 KIF18AQ8NI77 898 aa15.98■□□□□ 0.15
NF1-204ENST00000431387 SPATA32Q96LK8 384 aa15.98■□□□□ 0.15
NF1-204ENST00000431387 TMEM51Q9NW97 253 aa15.98■□□□□ 0.15
NF1-204ENST00000431387 CLIP2Q9UDT6 1046 aa15.98■□□□□ 0.15
NF1-204ENST00000431387 MST1RQ04912 1400 aa15.98■□□□□ 0.15
NF1-204ENST00000431387 CYP21A2P08686 494 aa15.97■□□□□ 0.15
NF1-204ENST00000431387 MAPK8IP2Q13387 824 aaPredicted RBP15.97■□□□□ 0.15
NF1-204ENST00000431387 CHRNA2Q15822 529 aa15.97■□□□□ 0.15
NF1-204ENST00000431387 Q6ZUG5 572 aa15.97■□□□□ 0.15
NF1-204ENST00000431387 GTF3C6Q969F1 213 aa15.97■□□□□ 0.15
NF1-204ENST00000431387 HAUS7Q99871 368 aa15.97■□□□□ 0.15
NF1-204ENST00000431387 KIF1AQ12756 1690 aa15.97■□□□□ 0.15
NF1-204ENST00000431387 ALS2Q96Q42 1657 aa15.97■□□□□ 0.15
NF1-204ENST00000431387 CASP7P55210 303 aa15.97■□□□□ 0.15
NF1-204ENST00000431387 MCMDC2Q4G0Z9 681 aa15.97■□□□□ 0.15
NF1-204ENST00000431387 LEO1Q8WVC0 666 aaPredicted RBP15.97■□□□□ 0.15
NF1-204ENST00000431387 SCAND2PQ9GZW5 306 aaPredicted RBP15.97■□□□□ 0.15
NF1-204ENST00000431387 U3KPZ7 1027 aaPredicted RBP15.97■□□□□ 0.15
NF1-204ENST00000431387 GOLGA6L4A6NEF3 574 aa15.97■□□□□ 0.15
NF1-204ENST00000431387 ERICH4A6NGS2 130 aa15.97■□□□□ 0.15
NF1-204ENST00000431387 KMT5BQ4FZB7 885 aa15.97■□□□□ 0.15
NF1-204ENST00000431387 LMBR1LQ6UX01 489 aa15.97■□□□□ 0.15
NF1-204ENST00000431387 TRMT1Q9NXH9 659 aaKnown RBP15.97■□□□□ 0.15
NF1-204ENST00000431387 ZNF215Q9UL58 517 aaPredicted RBP15.97■□□□□ 0.15
NF1-204ENST00000431387 NR1I2O75469 434 aa15.96■□□□□ 0.15
NF1-204ENST00000431387 HSP90B1P14625 803 aaKnown RBP15.96■□□□□ 0.15
NF1-204ENST00000431387 CABP4P57796 275 aa15.96■□□□□ 0.15
NF1-204ENST00000431387 CEP135Q66GS9 1140 aa15.96■□□□□ 0.15
NF1-204ENST00000431387 PLA2G4DQ86XP0 818 aa15.96■□□□□ 0.15
NF1-204ENST00000431387 ZNF165P49910 485 aa15.96■□□□□ 0.14
NF1-204ENST00000431387 PLBD2Q8NHP8 589 aa15.96■□□□□ 0.14
NF1-204ENST00000431387 LRRC2Q9BYS8 371 aa15.96■□□□□ 0.14
NF1-204ENST00000431387 AFDNP55196 1824 aaKnown RBP15.95■□□□□ 0.14
NF1-204ENST00000431387 SLFNL1Q499Z3 407 aa15.95■□□□□ 0.14
NF1-204ENST00000431387 BRF1Q92994 677 aa15.95■□□□□ 0.14
NF1-204ENST00000431387 DDX11Q96FC9 970 aa15.95■□□□□ 0.14
NF1-204ENST00000431387 RFX7Q2KHR2 1363 aa15.95■□□□□ 0.14
NF1-204ENST00000431387 FOXO4P98177 505 aa15.94■□□□□ 0.14
NF1-204ENST00000431387 STOX1Q6ZVD7 989 aa15.94■□□□□ 0.14
NF1-204ENST00000431387 SYTL4Q96C24 671 aaPredicted RBP15.94■□□□□ 0.14
NF1-204ENST00000431387 ARFGEF2Q9Y6D5 1785 aa15.94■□□□□ 0.14
NF1-204ENST00000431387 RESTQ13127 1097 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms