RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 TRPM4Q8TD43 1214 aa5.46□□□□□ -1.54
HMGB1P9-201ENST00000429856 SCG3Q8WXD2 468 aaKnown RBP5.46□□□□□ -1.54
HMGB1P9-201ENST00000429856 CLP1Q92989 425 aaKnown RBP5.46□□□□□ -1.54
HMGB1P9-201ENST00000429856 C11orf16Q9NQ32 467 aa5.46□□□□□ -1.54
HMGB1P9-201ENST00000429856 F8W735 103 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P9-201ENST00000429856 C21orf2O43822 256 aa5.45□□□□□ -1.54
HMGB1P9-201ENST00000429856 WEE1P30291 646 aa5.45□□□□□ -1.54
HMGB1P9-201ENST00000429856 DHX32Q7L7V1 743 aaKnown RBP5.45□□□□□ -1.54
HMGB1P9-201ENST00000429856 SRA1Q9HD15 236 aaKnown RBP5.45□□□□□ -1.54
HMGB1P9-201ENST00000429856 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.45□□□□□ -1.54
HMGB1P9-201ENST00000429856 USTQ9Y2C2 406 aa5.45□□□□□ -1.54
HMGB1P9-201ENST00000429856 ZBTB42B2RXF5 422 aa5.44□□□□□ -1.54
HMGB1P9-201ENST00000429856 DHX15O43143 795 aaKnown RBP5.44□□□□□ -1.54
HMGB1P9-201ENST00000429856 GLB1P16278 677 aa5.44□□□□□ -1.54
HMGB1P9-201ENST00000429856 FAM69CQ0P6D2 419 aa5.44□□□□□ -1.54
HMGB1P9-201ENST00000429856 MAP4K3Q8IVH8 894 aa5.44□□□□□ -1.54
HMGB1P9-201ENST00000429856 VTI1AQ96AJ9 217 aa5.44□□□□□ -1.54
HMGB1P9-201ENST00000429856 NGLY1Q96IV0 654 aa5.44□□□□□ -1.54
HMGB1P9-201ENST00000429856 C2orf49Q9BVC5 232 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P9-201ENST00000429856 SMG9Q9H0W8 520 aaKnown RBP5.44□□□□□ -1.54
HMGB1P9-201ENST00000429856 TGFBR3LH3BV60 316 aa5.43□□□□□ -1.54
HMGB1P9-201ENST00000429856 WNT11O96014 354 aa5.43□□□□□ -1.54
HMGB1P9-201ENST00000429856 TGFB1P01137 390 aa5.43□□□□□ -1.54
HMGB1P9-201ENST00000429856 TARSP26639 723 aaKnown RBP5.43□□□□□ -1.54
HMGB1P9-201ENST00000429856 GPLD1P80108 840 aa5.43□□□□□ -1.54
HMGB1P9-201ENST00000429856 MLLT1Q03111 559 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P9-201ENST00000429856 CHMP7Q8WUX9 453 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P9-201ENST00000429856 PRMT3O60678 531 aa5.42□□□□□ -1.54
HMGB1P9-201ENST00000429856 RARAP10276 462 aa5.42□□□□□ -1.54
HMGB1P9-201ENST00000429856 PLAURQ03405 335 aa5.42□□□□□ -1.54
HMGB1P9-201ENST00000429856 OCLNQ16625 522 aa5.42□□□□□ -1.54
HMGB1P9-201ENST00000429856 RTN1Q16799 776 aa5.42□□□□□ -1.54
HMGB1P9-201ENST00000429856 B4GALNT3Q6L9W6 998 aa5.42□□□□□ -1.54
HMGB1P9-201ENST00000429856 KRT25Q7Z3Z0 450 aa5.42□□□□□ -1.54
HMGB1P9-201ENST00000429856 IL22RA1Q8N6P7 574 aa5.42□□□□□ -1.54
HMGB1P9-201ENST00000429856 CXXC1Q9P0U4 656 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P9-201ENST00000429856 TMEM88BA6NKF7 163 aa5.41□□□□□ -1.54
HMGB1P9-201ENST00000429856 LGR5O75473 907 aa5.41□□□□□ -1.54
HMGB1P9-201ENST00000429856 SASH3O75995 380 aa5.41□□□□□ -1.54
HMGB1P9-201ENST00000429856 EIF2AK2P19525 551 aaKnown RBP5.41□□□□□ -1.54
HMGB1P9-201ENST00000429856 NRLP54845 237 aa5.41□□□□□ -1.54
HMGB1P9-201ENST00000429856 Q6ZS46 218 aa5.41□□□□□ -1.54
HMGB1P9-201ENST00000429856 HFE2Q6ZVN8 426 aa5.41□□□□□ -1.54
HMGB1P9-201ENST00000429856 COL26A1Q96A83 441 aa5.41□□□□□ -1.54
HMGB1P9-201ENST00000429856 PRIMPOLQ96LW4 560 aa5.41□□□□□ -1.54
HMGB1P9-201ENST00000429856 CEP41Q9BYV8 373 aa5.41□□□□□ -1.54
HMGB1P9-201ENST00000429856 MUC3BQ9H195 1237 aa5.41□□□□□ -1.54
HMGB1P9-201ENST00000429856 ZFATQ9P243 1243 aa5.41□□□□□ -1.54
HMGB1P9-201ENST00000429856 DMGDHQ9UI17 866 aaKnown RBP5.41□□□□□ -1.54
HMGB1P9-201ENST00000429856 ATP2B4P23634 1241 aa5.4□□□□□ -1.54
HMGB1P9-201ENST00000429856 INPP5BP32019 993 aa5.4□□□□□ -1.54
HMGB1P9-201ENST00000429856 NFIAQ12857 509 aa5.4□□□□□ -1.54
HMGB1P9-201ENST00000429856 FKBP5Q13451 457 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P9-201ENST00000429856 GDF6Q6KF10 455 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P9-201ENST00000429856 DTX1Q86Y01 620 aa5.4□□□□□ -1.54
HMGB1P9-201ENST00000429856 ZDHHC13Q8IUH4 622 aa5.4□□□□□ -1.54
HMGB1P9-201ENST00000429856 CACTIN-AS1Q8N1I8 211 aa5.4□□□□□ -1.54
HMGB1P9-201ENST00000429856 PLD4Q96BZ4 506 aa5.4□□□□□ -1.54
HMGB1P9-201ENST00000429856 IFT43Q96FT9 208 aa5.4□□□□□ -1.54
HMGB1P9-201ENST00000429856 KRTAP9-8Q9BYQ0 159 aa5.4□□□□□ -1.54
HMGB1P9-201ENST00000429856 RBSNQ9H1K0 784 aa5.4□□□□□ -1.54
HMGB1P9-201ENST00000429856 LOC102724428A0A0B4J2F2 783 aa5.39□□□□□ -1.55
HMGB1P9-201ENST00000429856 GHRHP01286 108 aa5.39□□□□□ -1.55
HMGB1P9-201ENST00000429856 SPINK2P20155 84 aa5.39□□□□□ -1.55
HMGB1P9-201ENST00000429856 IDH3AP50213 366 aa5.39□□□□□ -1.55
HMGB1P9-201ENST00000429856 SIK1P57059 783 aa5.39□□□□□ -1.55
HMGB1P9-201ENST00000429856 RNF43Q68DV7 783 aa5.39□□□□□ -1.55
HMGB1P9-201ENST00000429856 MYO19Q96H55 970 aa5.39□□□□□ -1.55
HMGB1P9-201ENST00000429856 UBL7Q96S82 380 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P9-201ENST00000429856 TLR7Q9NYK1 1049 aaKnown RBP5.39□□□□□ -1.55
HMGB1P9-201ENST00000429856 ADAMTS4O75173 837 aa5.38□□□□□ -1.55
HMGB1P9-201ENST00000429856 ARSDP51689 593 aa5.38□□□□□ -1.55
HMGB1P9-201ENST00000429856 SETDB1Q15047 1291 aa5.38□□□□□ -1.55
HMGB1P9-201ENST00000429856 AGGF1Q8N302 714 aaeCLIP5.38□□□□□ -1.55
HMGB1P9-201ENST00000429856 RETREG2Q8NC44 543 aa5.38□□□□□ -1.55
HMGB1P9-201ENST00000429856 DBNDD2Q9BQY9 259 aa5.38□□□□□ -1.55
HMGB1P9-201ENST00000429856 MTMR7Q9Y216 660 aa5.38□□□□□ -1.55
HMGB1P9-201ENST00000429856 BCS1LQ9Y276 419 aa5.38□□□□□ -1.55
HMGB1P9-201ENST00000429856 PSAPP07602 524 aa5.37□□□□□ -1.55
HMGB1P9-201ENST00000429856 SSFA2P28290 1259 aa5.37□□□□□ -1.55
HMGB1P9-201ENST00000429856 UVSSAQ2YD98 709 aa5.37□□□□□ -1.55
HMGB1P9-201ENST00000429856 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.37□□□□□ -1.55
HMGB1P9-201ENST00000429856 QTRT2Q9H974 415 aaKnown RBP5.37□□□□□ -1.55
HMGB1P9-201ENST00000429856 SLAIN2Q9P270 581 aa5.37□□□□□ -1.55
HMGB1P9-201ENST00000429856 ADGRE2Q9UHX3 823 aa5.37□□□□□ -1.55
HMGB1P9-201ENST00000429856 PPME1Q9Y570 386 aa5.37□□□□□ -1.55
HMGB1P9-201ENST00000429856 J3QW42 95 aa5.36□□□□□ -1.55
HMGB1P9-201ENST00000429856 MICAL2O94851 1124 aa5.36□□□□□ -1.55
HMGB1P9-201ENST00000429856 GRNP28799 593 aaKnown RBP5.36□□□□□ -1.55
HMGB1P9-201ENST00000429856 C16orf46Q6P387 395 aa5.36□□□□□ -1.55
HMGB1P9-201ENST00000429856 TRIM42Q8IWZ5 723 aa5.36□□□□□ -1.55
HMGB1P9-201ENST00000429856 UTP4Q969X6 686 aaKnown RBP5.36□□□□□ -1.55
HMGB1P9-201ENST00000429856 C7orf69Q9H7B7 122 aa5.36□□□□□ -1.55
HMGB1P9-201ENST00000429856 PRR19A6NJB7 356 aa5.35□□□□□ -1.55
HMGB1P9-201ENST00000429856 JAG1P78504 1218 aa5.35□□□□□ -1.55
HMGB1P9-201ENST00000429856 C11orf91Q3C1V1 193 aa5.35□□□□□ -1.55
HMGB1P9-201ENST00000429856 CLEC10AQ8IUN9 316 aa5.35□□□□□ -1.55
HMGB1P9-201ENST00000429856 ARMC10Q8N2F6 343 aa5.35□□□□□ -1.55
HMGB1P9-201ENST00000429856 MKNK1Q9BUB5 465 aa5.35□□□□□ -1.55
HMGB1P9-201ENST00000429856 KLK14Q9P0G3 267 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms