RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 VEGFBP49765 207 aa19.76■□□□□ 0.75
CTDSP1-202ENST00000428361 FLIIQ13045 1269 aa19.76■□□□□ 0.75
CTDSP1-202ENST00000428361 FKBP5Q13451 457 aaPredicted RBP19.76■□□□□ 0.75
CTDSP1-202ENST00000428361 SEC31BQ9NQW1 1179 aa19.76■□□□□ 0.75
CTDSP1-202ENST00000428361 RTL9Q8NET4 1388 aa19.75■□□□□ 0.75
CTDSP1-202ENST00000428361 NEURL1BA8MQ27 555 aa19.75■□□□□ 0.75
CTDSP1-202ENST00000428361 IGKV5-2P06315 115 aa19.75■□□□□ 0.75
CTDSP1-202ENST00000428361 ATP2B4P23634 1241 aa19.75■□□□□ 0.75
CTDSP1-202ENST00000428361 MICALL2Q8IY33 904 aa19.75■□□□□ 0.75
CTDSP1-202ENST00000428361 PGAP2Q9UHJ9 254 aa19.75■□□□□ 0.75
CTDSP1-202ENST00000428361 TRPM7Q96QT4 1865 aa19.74■□□□□ 0.75
CTDSP1-202ENST00000428361 PSMD14O00487 310 aa19.74■□□□□ 0.75
CTDSP1-202ENST00000428361 CDC37L1Q7L3B6 337 aa19.74■□□□□ 0.75
CTDSP1-202ENST00000428361 MYH3P11055 1940 aa19.73■□□□□ 0.75
CTDSP1-202ENST00000428361 MAP2K1Q02750 393 aaPredicted RBP19.73■□□□□ 0.75
CTDSP1-202ENST00000428361 COL13A1Q5TAT6 717 aaPredicted RBP19.73■□□□□ 0.75
CTDSP1-202ENST00000428361 TNS4Q8IZW8 715 aa19.73■□□□□ 0.75
CTDSP1-202ENST00000428361 LINS1Q8NG48 757 aa19.73■□□□□ 0.75
CTDSP1-202ENST00000428361 DNAAF4Q8WXU2 420 aa19.73■□□□□ 0.75
CTDSP1-202ENST00000428361 CCDC85AQ96PX6 553 aaPredicted RBP19.73■□□□□ 0.75
CTDSP1-202ENST00000428361 IGHMBP2P38935 993 aaKnown RBP19.72■□□□□ 0.75
CTDSP1-202ENST00000428361 DOK7Q18PE1 504 aa19.72■□□□□ 0.75
CTDSP1-202ENST00000428361 CWF19L2Q2TBE0 894 aaKnown RBP19.72■□□□□ 0.75
CTDSP1-202ENST00000428361 PAXIP1Q6ZW49 1069 aaPredicted RBP19.72■□□□□ 0.75
CTDSP1-202ENST00000428361 TTLL11Q8NHH1 800 aa19.72■□□□□ 0.75
CTDSP1-202ENST00000428361 JARID2Q92833 1246 aaPredicted RBP19.72■□□□□ 0.75
CTDSP1-202ENST00000428361 BSDC1Q9NW68 430 aaPredicted RBP19.72■□□□□ 0.75
CTDSP1-202ENST00000428361 SALL2Q9Y467 1007 aaPredicted RBP19.72■□□□□ 0.75
CTDSP1-202ENST00000428361 WDR33Q9C0J8 1336 aaKnown RBP19.72■□□□□ 0.75
CTDSP1-202ENST00000428361 H7C1W4 665 aa19.71■□□□□ 0.75
CTDSP1-202ENST00000428361 VAMP4O75379 141 aa19.71■□□□□ 0.75
CTDSP1-202ENST00000428361 CTCFP49711 727 aaPredicted RBP19.71■□□□□ 0.75
CTDSP1-202ENST00000428361 GCKRQ14397 625 aa19.71■□□□□ 0.75
CTDSP1-202ENST00000428361 G2E3Q7L622 706 aa19.71■□□□□ 0.75
CTDSP1-202ENST00000428361 UBE3BQ7Z3V4 1068 aa19.71■□□□□ 0.75
CTDSP1-202ENST00000428361 PLA2G12BQ9BX93 195 aa19.71■□□□□ 0.75
CTDSP1-202ENST00000428361 ZBTB12Q9Y330 459 aaPredicted RBP19.71■□□□□ 0.75
CTDSP1-202ENST00000428361 TLL2Q9Y6L7 1015 aa19.71■□□□□ 0.75
CTDSP1-202ENST00000428361 TRAF5O00463 557 aa19.7■□□□□ 0.74
CTDSP1-202ENST00000428361 CELF2O95319 508 aaKnown RBP19.7■□□□□ 0.74
CTDSP1-202ENST00000428361 VIL1P09327 827 aaKnown RBP19.7■□□□□ 0.74
CTDSP1-202ENST00000428361 EXOSC9Q06265 439 aaKnown RBP19.7■□□□□ 0.74
CTDSP1-202ENST00000428361 PODNQ7Z5L7 613 aa19.7■□□□□ 0.74
CTDSP1-202ENST00000428361 FAM9BQ8IZU0 186 aa19.7■□□□□ 0.74
CTDSP1-202ENST00000428361 TRPM4Q8TD43 1214 aa19.7■□□□□ 0.74
CTDSP1-202ENST00000428361 HHIPL1Q96JK4 782 aa19.7■□□□□ 0.74
CTDSP1-202ENST00000428361 BEGAINQ9BUH8 593 aa19.7■□□□□ 0.74
CTDSP1-202ENST00000428361 ZNF609O15014 1411 aa19.69■□□□□ 0.74
CTDSP1-202ENST00000428361 AGBL3Q8NEM8 1001 aa19.69■□□□□ 0.74
CTDSP1-202ENST00000428361 GREM2Q9H772 168 aa19.69■□□□□ 0.74
CTDSP1-202ENST00000428361 PRDM10Q9NQV6 1147 aa19.69■□□□□ 0.74
CTDSP1-202ENST00000428361 WBP1LQ9NX94 342 aa19.69■□□□□ 0.74
CTDSP1-202ENST00000428361 MED23Q9ULK4 1368 aa19.69■□□□□ 0.74
CTDSP1-202ENST00000428361 COL4A1P02462 1669 aa19.68■□□□□ 0.74
CTDSP1-202ENST00000428361 HIRAP54198 1017 aaPredicted RBP19.68■□□□□ 0.74
CTDSP1-202ENST00000428361 CST9Q5W186 159 aa19.68■□□□□ 0.74
CTDSP1-202ENST00000428361 DCPSQ96C86 337 aaKnown RBP19.68■□□□□ 0.74
CTDSP1-202ENST00000428361 CAPNS2Q96L46 248 aa19.68■□□□□ 0.74
CTDSP1-202ENST00000428361 MPHOSPH8Q99549 860 aa19.68■□□□□ 0.74
CTDSP1-202ENST00000428361 GLIS2Q9BZE0 524 aaPredicted RBP19.68■□□□□ 0.74
CTDSP1-202ENST00000428361 ANKRD2Q9GZV1 360 aa19.68■□□□□ 0.74
CTDSP1-202ENST00000428361 RSBN1LQ6PCB5 846 aaPredicted RBP19.67■□□□□ 0.74
CTDSP1-202ENST00000428361 GPR101Q96P66 508 aaPredicted RBP19.67■□□□□ 0.74
CTDSP1-202ENST00000428361 MINPP1Q9UNW1 487 aa19.67■□□□□ 0.74
CTDSP1-202ENST00000428361 LEMD3Q9Y2U8 911 aa19.67■□□□□ 0.74
CTDSP1-202ENST00000428361 FOXN1O15353 648 aa19.66■□□□□ 0.74
CTDSP1-202ENST00000428361 ITGA6P23229 1130 aa19.66■□□□□ 0.74
CTDSP1-202ENST00000428361 MAP2K2P36507 400 aa19.66■□□□□ 0.74
CTDSP1-202ENST00000428361 KIF4BQ2VIQ3 1234 aa19.66■□□□□ 0.74
CTDSP1-202ENST00000428361 TBC1D10BQ4KMP7 808 aaPredicted RBP19.66■□□□□ 0.74
CTDSP1-202ENST00000428361 SAMD7Q7Z3H4 446 aa19.66■□□□□ 0.74
CTDSP1-202ENST00000428361 SAPCD2Q86UD0 394 aa19.66■□□□□ 0.74
CTDSP1-202ENST00000428361 ZNF408Q9H9D4 720 aa19.66■□□□□ 0.74
CTDSP1-202ENST00000428361 USP17L3A6NCW0 530 aa19.65■□□□□ 0.74
CTDSP1-202ENST00000428361 USP17L4A6NCW7 530 aa19.65■□□□□ 0.74
CTDSP1-202ENST00000428361 MMP14P50281 582 aa19.65■□□□□ 0.74
CTDSP1-202ENST00000428361 CCT4P50991 539 aaKnown RBP19.65■□□□□ 0.74
CTDSP1-202ENST00000428361 USP17L1Q7RTZ2 530 aa19.65■□□□□ 0.74
CTDSP1-202ENST00000428361 KRT26Q7Z3Y9 468 aa19.65■□□□□ 0.74
CTDSP1-202ENST00000428361 MYO3BQ8WXR4 1341 aa19.65■□□□□ 0.74
CTDSP1-202ENST00000428361 ANKRD18BA2A2Z9 1011 aa19.64■□□□□ 0.73
CTDSP1-202ENST00000428361 CSF1RP07333 972 aa19.64■□□□□ 0.73
CTDSP1-202ENST00000428361 FMR1Q06787 632 aaKnown RBP eCLIP19.64■□□□□ 0.73
CTDSP1-202ENST00000428361 SULF1Q8IWU6 871 aa19.64■□□□□ 0.73
CTDSP1-202ENST00000428361 COA1Q9GZY4 146 aa19.64■□□□□ 0.73
CTDSP1-202ENST00000428361 THSD7BQ9C0I4 1608 aa19.64■□□□□ 0.73
CTDSP1-202ENST00000428361 SHTN1A0MZ66 631 aa19.63■□□□□ 0.73
CTDSP1-202ENST00000428361 KCNJ4P48050 445 aa19.63■□□□□ 0.73
CTDSP1-202ENST00000428361 CASP7P55210 303 aa19.63■□□□□ 0.73
CTDSP1-202ENST00000428361 ZNF280AP59817 542 aaPredicted RBP19.63■□□□□ 0.73
CTDSP1-202ENST00000428361 GRM1Q13255 1194 aa19.63■□□□□ 0.73
CTDSP1-202ENST00000428361 RBM26Q5T8P6 1007 aaKnown RBP19.63■□□□□ 0.73
CTDSP1-202ENST00000428361 CYP4F22Q6NT55 531 aa19.63■□□□□ 0.73
CTDSP1-202ENST00000428361 USP48Q86UV5 1035 aa19.63■□□□□ 0.73
CTDSP1-202ENST00000428361 KCNQ5Q9NR82 932 aa19.63■□□□□ 0.73
CTDSP1-202ENST00000428361 PSME4Q14997 1843 aa19.62■□□□□ 0.73
CTDSP1-202ENST00000428361 CA12O43570 354 aa19.62■□□□□ 0.73
CTDSP1-202ENST00000428361 USP17L8P0C7I0 530 aa19.62■□□□□ 0.73
CTDSP1-202ENST00000428361 IFIT5Q13325 482 aaKnown RBP19.62■□□□□ 0.73
CTDSP1-202ENST00000428361 FAM161AQ3B820 660 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms