RNA–Protein interactions for RNA: ENST00000424830.6

PUDP-203, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 3 BASIC

Gene PUDP, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-203ENST00000424830 RTL9Q8NET4 1388 aa21■□□□□ 0.95
PUDP-203ENST00000424830 TNRC18O15417 2968 aaPredicted RBP21■□□□□ 0.95
PUDP-203ENST00000424830 FAM155AB1AL88 458 aaPredicted RBP20.99■□□□□ 0.95
PUDP-203ENST00000424830 ZNF157P51786 506 aaPredicted RBP20.99■□□□□ 0.95
PUDP-203ENST00000424830 KIF4BQ2VIQ3 1234 aa20.99■□□□□ 0.95
PUDP-203ENST00000424830 SULF1Q8IWU6 871 aa20.99■□□□□ 0.95
PUDP-203ENST00000424830 CCDC146Q8IYE0 955 aa20.99■□□□□ 0.95
PUDP-203ENST00000424830 TBC1D16Q8TBP0 767 aa20.99■□□□□ 0.95
PUDP-203ENST00000424830 ZC3H12CQ9C0D7 883 aaKnown RBP20.99■□□□□ 0.95
PUDP-203ENST00000424830 HYPKQ9NX55 129 aa20.99■□□□□ 0.95
PUDP-203ENST00000424830 G3V3G9 751 aa20.98■□□□□ 0.95
PUDP-203ENST00000424830 IRS4O14654 1257 aaPredicted RBP20.98■□□□□ 0.95
PUDP-203ENST00000424830 HSP90B1P14625 803 aaKnown RBP20.98■□□□□ 0.95
PUDP-203ENST00000424830 RPS8P62241 208 aaKnown RBP20.98■□□□□ 0.95
PUDP-203ENST00000424830 DCAF8Q5TAQ9 597 aa20.98■□□□□ 0.95
PUDP-203ENST00000424830 AKAP11Q9UKA4 1901 aa20.98■□□□□ 0.95
PUDP-203ENST00000424830 KIF23Q02241 960 aaPredicted RBP20.97■□□□□ 0.95
PUDP-203ENST00000424830 KCNQ5Q9NR82 932 aa20.97■□□□□ 0.95
PUDP-203ENST00000424830 GGA3Q9NZ52 723 aa20.97■□□□□ 0.95
PUDP-203ENST00000424830 COL4A1P02462 1669 aa20.96■□□□□ 0.95
PUDP-203ENST00000424830 TRIM28Q13263 835 aaKnown RBP20.96■□□□□ 0.95
PUDP-203ENST00000424830 RUNDC1Q96C34 613 aa20.96■□□□□ 0.95
PUDP-203ENST00000424830 ANKIB1Q9P2G1 1089 aa20.96■□□□□ 0.95
PUDP-203ENST00000424830 TRIM35Q9UPQ4 493 aa20.96■□□□□ 0.95
PUDP-203ENST00000424830 PDE4DIPQ5VU43 2346 aa20.95■□□□□ 0.95
PUDP-203ENST00000424830 SCN9AQ15858 1988 aa20.95■□□□□ 0.94
PUDP-203ENST00000424830 UFL1O94874 794 aa20.95■□□□□ 0.94
PUDP-203ENST00000424830 VIL1P09327 827 aaKnown RBP20.95■□□□□ 0.94
PUDP-203ENST00000424830 PODXL2Q9NZ53 605 aa20.95■□□□□ 0.94
PUDP-203ENST00000424830 GOLGA2Q08379 1002 aa20.94■□□□□ 0.94
PUDP-203ENST00000424830 WDR43Q15061 677 aaKnown RBP eCLIP20.94■□□□□ 0.94
PUDP-203ENST00000424830 RIC3Q7Z5B4 369 aa20.94■□□□□ 0.94
PUDP-203ENST00000424830 ZBTB38Q8NAP3 1195 aaPredicted RBP20.94■□□□□ 0.94
PUDP-203ENST00000424830 TRPA1O75762 1119 aa20.93■□□□□ 0.94
PUDP-203ENST00000424830 SLC10A3P09131 477 aa20.93■□□□□ 0.94
PUDP-203ENST00000424830 DUSP27Q5VZP5 1158 aa20.93■□□□□ 0.94
PUDP-203ENST00000424830 CDCA5Q96FF9 252 aa20.93■□□□□ 0.94
PUDP-203ENST00000424830 RNF186Q9NXI6 227 aa20.93■□□□□ 0.94
PUDP-203ENST00000424830 GGA1Q9UJY5 639 aa20.93■□□□□ 0.94
PUDP-203ENST00000424830 MYBBP1AQ9BQG0 1328 aaKnown RBP20.93■□□□□ 0.94
PUDP-203ENST00000424830 ZNF609O15014 1411 aa20.92■□□□□ 0.94
PUDP-203ENST00000424830 REM2Q8IYK8 340 aaPredicted RBP20.92■□□□□ 0.94
PUDP-203ENST00000424830 CCDC152Q4G0S7 254 aa20.91■□□□□ 0.94
PUDP-203ENST00000424830 AGBL3Q8NEM8 1001 aa20.91■□□□□ 0.94
PUDP-203ENST00000424830 SEC31BQ9NQW1 1179 aa20.91■□□□□ 0.94
PUDP-203ENST00000424830 PSME4Q14997 1843 aa20.91■□□□□ 0.94
PUDP-203ENST00000424830 ZNF280AP59817 542 aaPredicted RBP20.9■□□□□ 0.94
PUDP-203ENST00000424830 ANGEL2Q5VTE6 544 aaKnown RBP20.9■□□□□ 0.94
PUDP-203ENST00000424830 RSBN1LQ6PCB5 846 aaPredicted RBP20.9■□□□□ 0.94
PUDP-203ENST00000424830 ASTN2O75129 1339 aaPredicted RBP20.9■□□□□ 0.94
PUDP-203ENST00000424830 FKBP1BP68106 108 aa20.89■□□□□ 0.93
PUDP-203ENST00000424830 SCARF1Q14162 830 aa20.89■□□□□ 0.93
PUDP-203ENST00000424830 CSRNP1Q96S65 589 aa20.89■□□□□ 0.93
PUDP-203ENST00000424830 MBIPQ9NS73 344 aa20.89■□□□□ 0.93
PUDP-203ENST00000424830 PAPPA2Q9BXP8 1791 aa20.89■□□□□ 0.93
PUDP-203ENST00000424830 MYD88Q99836 296 aa20.88■□□□□ 0.93
PUDP-203ENST00000424830 XDHP47989 1333 aa20.88■□□□□ 0.93
PUDP-203ENST00000424830 PDE8AO60658 829 aa20.87■□□□□ 0.93
PUDP-203ENST00000424830 USP17L8P0C7I0 530 aa20.87■□□□□ 0.93
PUDP-203ENST00000424830 SOX10P56693 466 aa20.87■□□□□ 0.93
PUDP-203ENST00000424830 CTU1Q7Z7A3 348 aaKnown RBP20.87■□□□□ 0.93
PUDP-203ENST00000424830 RASAL3Q86YV0 1011 aa20.87■□□□□ 0.93
PUDP-203ENST00000424830 CCDC191Q8NCU4 936 aa20.87■□□□□ 0.93
PUDP-203ENST00000424830 MYOZ2Q9NPC6 264 aa20.87■□□□□ 0.93
PUDP-203ENST00000424830 PCCAP05165 728 aaPredicted RBP20.86■□□□□ 0.93
PUDP-203ENST00000424830 ANKRD18AQ8IVF6 992 aa20.86■□□□□ 0.93
PUDP-203ENST00000424830 CWC25Q9NXE8 425 aaPredicted RBP20.86■□□□□ 0.93
PUDP-203ENST00000424830 PITPNM2Q9BZ72 1349 aa20.86■□□□□ 0.93
PUDP-203ENST00000424830 PODNQ7Z5L7 613 aa20.85■□□□□ 0.93
PUDP-203ENST00000424830 CCDC85AQ96PX6 553 aaPredicted RBP20.85■□□□□ 0.93
PUDP-203ENST00000424830 PHAXQ9H814 394 aaKnown RBP20.85■□□□□ 0.93
PUDP-203ENST00000424830 ADAMTS8Q9UP79 889 aa20.85■□□□□ 0.93
PUDP-203ENST00000424830 USP17L3A6NCW0 530 aa20.84■□□□□ 0.93
PUDP-203ENST00000424830 USP17L4A6NCW7 530 aa20.84■□□□□ 0.93
PUDP-203ENST00000424830 USP17L1Q7RTZ2 530 aa20.84■□□□□ 0.93
PUDP-203ENST00000424830 PCDH10Q9P2E7 1040 aa20.84■□□□□ 0.93
PUDP-203ENST00000424830 DDX58O95786 925 aaKnown RBP20.83■□□□□ 0.93
PUDP-203ENST00000424830 ATP2B4P23634 1241 aa20.83■□□□□ 0.93
PUDP-203ENST00000424830 CALD1Q05682 793 aaKnown RBP20.83■□□□□ 0.93
PUDP-203ENST00000424830 GMLQ99445 158 aa20.83■□□□□ 0.93
PUDP-203ENST00000424830 IFT57Q9NWB7 429 aa20.83■□□□□ 0.93
PUDP-203ENST00000424830 CDC5LQ99459 802 aaKnown RBP20.82■□□□□ 0.92
PUDP-203ENST00000424830 CHMP4AQ9BY43 222 aa20.82■□□□□ 0.92
PUDP-203ENST00000424830 ELL2O00472 640 aaPredicted RBP20.81■□□□□ 0.92
PUDP-203ENST00000424830 ZNF853P0CG23 659 aa20.81■□□□□ 0.92
PUDP-203ENST00000424830 GNAI1P63096 354 aa20.81■□□□□ 0.92
PUDP-203ENST00000424830 JARID2Q92833 1246 aaPredicted RBP20.81■□□□□ 0.92
PUDP-203ENST00000424830 METTL22Q9BUU2 404 aaPredicted RBP20.81■□□□□ 0.92
PUDP-203ENST00000424830 TTLL12Q14166 644 aaPredicted RBP20.8■□□□□ 0.92
PUDP-203ENST00000424830 OGFOD1Q8N543 542 aa20.8■□□□□ 0.92
PUDP-203ENST00000424830 HDAC9Q9UKV0 1011 aa20.8■□□□□ 0.92
PUDP-203ENST00000424830 MED23Q9ULK4 1368 aa20.8■□□□□ 0.92
PUDP-203ENST00000424830 MYH3P11055 1940 aa20.8■□□□□ 0.92
PUDP-203ENST00000424830 NF2P35240 595 aa20.79■□□□□ 0.92
PUDP-203ENST00000424830 PKN2Q16513 984 aaKnown RBP20.79■□□□□ 0.92
PUDP-203ENST00000424830 SPEF2Q9C093 1822 aa20.79■□□□□ 0.92
PUDP-203ENST00000424830 MYO3BQ8WXR4 1341 aa20.79■□□□□ 0.92
PUDP-203ENST00000424830 CTSWP56202 376 aa20.78■□□□□ 0.92
PUDP-203ENST00000424830 DDX10Q13206 875 aaKnown RBP20.78■□□□□ 0.92
PUDP-203ENST00000424830 CCDC30Q5VVM6 783 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms