RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 FMR1Q06787 632 aaKnown RBP eCLIP23.6■■□□□ 1.37
NUP50-207ENST00000424634 ANKRD18AQ8IVF6 992 aa23.6■■□□□ 1.37
NUP50-207ENST00000424634 GREM2Q9H772 168 aa23.6■■□□□ 1.37
NUP50-207ENST00000424634 SHTN1A0MZ66 631 aa23.59■■□□□ 1.37
NUP50-207ENST00000424634 LINS1Q8NG48 757 aa23.59■■□□□ 1.37
NUP50-207ENST00000424634 EYA3Q99504 573 aa23.59■■□□□ 1.37
NUP50-207ENST00000424634 BCL2L13Q9BXK5 485 aa23.59■■□□□ 1.37
NUP50-207ENST00000424634 ANKIB1Q9P2G1 1089 aa23.59■■□□□ 1.37
NUP50-207ENST00000424634 ZBTB12Q9Y330 459 aaPredicted RBP23.59■■□□□ 1.37
NUP50-207ENST00000424634 F6X3S4 739 aa23.58■■□□□ 1.37
NUP50-207ENST00000424634 PSMD14O00487 310 aa23.58■■□□□ 1.37
NUP50-207ENST00000424634 ECE2O60344 883 aa23.58■■□□□ 1.37
NUP50-207ENST00000424634 UFL1O94874 794 aa23.58■■□□□ 1.37
NUP50-207ENST00000424634 HIRAP54198 1017 aaPredicted RBP23.58■■□□□ 1.37
NUP50-207ENST00000424634 ZC3H12CQ9C0D7 883 aaKnown RBP23.58■■□□□ 1.37
NUP50-207ENST00000424634 CNOT7Q9UIV1 285 aaKnown RBP23.58■■□□□ 1.37
NUP50-207ENST00000424634 SCN9AQ15858 1988 aa23.58■■□□□ 1.36
NUP50-207ENST00000424634 WTIPA6NIX2 430 aaPredicted RBP23.57■■□□□ 1.36
NUP50-207ENST00000424634 PLA2G12BQ9BX93 195 aa23.57■■□□□ 1.36
NUP50-207ENST00000424634 GGA1Q9UJY5 639 aa23.57■■□□□ 1.36
NUP50-207ENST00000424634 SPEF2Q9C093 1822 aa23.56■■□□□ 1.36
NUP50-207ENST00000424634 RTL9Q8NET4 1388 aa23.56■■□□□ 1.36
NUP50-207ENST00000424634 CDC5LQ99459 802 aaKnown RBP23.56■■□□□ 1.36
NUP50-207ENST00000424634 CNTNAP1P78357 1384 aa23.55■■□□□ 1.36
NUP50-207ENST00000424634 BEND3Q5T5X7 828 aa23.55■■□□□ 1.36
NUP50-207ENST00000424634 TRPM4Q8TD43 1214 aa23.55■■□□□ 1.36
NUP50-207ENST00000424634 BSDC1Q9NW68 430 aaPredicted RBP23.55■■□□□ 1.36
NUP50-207ENST00000424634 PGAP2Q9UHJ9 254 aa23.55■■□□□ 1.36
NUP50-207ENST00000424634 MINPP1Q9UNW1 487 aa23.55■■□□□ 1.36
NUP50-207ENST00000424634 XDHP47989 1333 aa23.55■■□□□ 1.36
NUP50-207ENST00000424634 TRAF5O00463 557 aa23.54■■□□□ 1.36
NUP50-207ENST00000424634 CSF1RP07333 972 aa23.54■■□□□ 1.36
NUP50-207ENST00000424634 DPF2Q92785 391 aa23.54■■□□□ 1.36
NUP50-207ENST00000424634 MICALL2Q8IY33 904 aa23.53■■□□□ 1.36
NUP50-207ENST00000424634 ATP2B4P23634 1241 aa23.52■■□□□ 1.36
NUP50-207ENST00000424634 CST9Q5W186 159 aa23.52■■□□□ 1.36
NUP50-207ENST00000424634 TRPM7Q96QT4 1865 aa23.51■■□□□ 1.35
NUP50-207ENST00000424634 H7C1D1 291 aa23.51■■□□□ 1.35
NUP50-207ENST00000424634 VIL1P09327 827 aaKnown RBP23.51■■□□□ 1.35
NUP50-207ENST00000424634 HSPA1AP0DMV8 641 aaKnown RBP23.51■■□□□ 1.35
NUP50-207ENST00000424634 HSPA1BP0DMV9 641 aaKnown RBP23.51■■□□□ 1.35
NUP50-207ENST00000424634 ITGA6P23229 1130 aa23.51■■□□□ 1.35
NUP50-207ENST00000424634 VEGFBP49765 207 aa23.51■■□□□ 1.35
NUP50-207ENST00000424634 FAM161AQ3B820 660 aa23.51■■□□□ 1.35
NUP50-207ENST00000424634 SAMD7Q7Z3H4 446 aa23.51■■□□□ 1.35
NUP50-207ENST00000424634 EGFRP00533 1210 aa23.5■■□□□ 1.35
NUP50-207ENST00000424634 FOXO4P98177 505 aa23.5■■□□□ 1.35
NUP50-207ENST00000424634 ZC3H15Q8WU90 426 aaKnown RBP23.5■■□□□ 1.35
NUP50-207ENST00000424634 GLIS2Q9BZE0 524 aaPredicted RBP23.5■■□□□ 1.35
NUP50-207ENST00000424634 POLR2AP24928 1970 aaKnown RBP23.49■■□□□ 1.35
NUP50-207ENST00000424634 RASSF10A6NK89 507 aa23.49■■□□□ 1.35
NUP50-207ENST00000424634 G3V3G9 751 aa23.49■■□□□ 1.35
NUP50-207ENST00000424634 RPS12P25398 132 aaKnown RBP23.49■■□□□ 1.35
NUP50-207ENST00000424634 DCAF8Q5TAQ9 597 aa23.49■■□□□ 1.35
NUP50-207ENST00000424634 IFFO2Q5TF58 517 aa23.49■■□□□ 1.35
NUP50-207ENST00000424634 IGHMBP2P38935 993 aaKnown RBP23.48■■□□□ 1.35
NUP50-207ENST00000424634 CCT4P50991 539 aaKnown RBP23.48■■□□□ 1.35
NUP50-207ENST00000424634 DEFB115Q30KQ5 88 aa23.48■■□□□ 1.35
NUP50-207ENST00000424634 PSME4Q14997 1843 aa23.47■■□□□ 1.35
NUP50-207ENST00000424634 SLFN5Q08AF3 891 aa23.47■■□□□ 1.35
NUP50-207ENST00000424634 TBC1D10BQ4KMP7 808 aaPredicted RBP23.47■■□□□ 1.35
NUP50-207ENST00000424634 EPHA10Q5JZY3 1008 aa23.47■■□□□ 1.35
NUP50-207ENST00000424634 COL13A1Q5TAT6 717 aaPredicted RBP23.47■■□□□ 1.35
NUP50-207ENST00000424634 ABT1Q9ULW3 272 aaKnown RBP23.47■■□□□ 1.35
NUP50-207ENST00000424634 E9PSI1 815 aa23.46■■□□□ 1.35
NUP50-207ENST00000424634 TXNRD3Q86VQ6 643 aa23.46■■□□□ 1.35
NUP50-207ENST00000424634 MRPL50Q8N5N7 158 aaKnown RBP23.46■■□□□ 1.35
NUP50-207ENST00000424634 RBM26Q5T8P6 1007 aaKnown RBP23.45■■□□□ 1.34
NUP50-207ENST00000424634 SLC4A10Q6U841 1118 aa23.45■■□□□ 1.34
NUP50-207ENST00000424634 DLK2Q6UY11 383 aa23.45■■□□□ 1.34
NUP50-207ENST00000424634 CDCA7LQ96GN5 454 aa23.45■■□□□ 1.34
NUP50-207ENST00000424634 MED23Q9ULK4 1368 aa23.44■■□□□ 1.34
NUP50-207ENST00000424634 GRM8O00222 908 aa23.44■■□□□ 1.34
NUP50-207ENST00000424634 RSBN1LQ6PCB5 846 aaPredicted RBP23.44■■□□□ 1.34
NUP50-207ENST00000424634 CDC37L1Q7L3B6 337 aa23.44■■□□□ 1.34
NUP50-207ENST00000424634 PODNQ7Z5L7 613 aa23.44■■□□□ 1.34
NUP50-207ENST00000424634 GMLQ99445 158 aa23.44■■□□□ 1.34
NUP50-207ENST00000424634 MPHOSPH8Q99549 860 aa23.44■■□□□ 1.34
NUP50-207ENST00000424634 LEMD3Q9Y2U8 911 aa23.44■■□□□ 1.34
NUP50-207ENST00000424634 ANKRD18BA2A2Z9 1011 aa23.43■■□□□ 1.34
NUP50-207ENST00000424634 ALDH1L1O75891 902 aa23.43■■□□□ 1.34
NUP50-207ENST00000424634 LMBR1LQ6UX01 489 aa23.43■■□□□ 1.34
NUP50-207ENST00000424634 USP48Q86UV5 1035 aa23.43■■□□□ 1.34
NUP50-207ENST00000424634 WDR33Q9C0J8 1336 aaKnown RBP23.42■■□□□ 1.34
NUP50-207ENST00000424634 USP17L3A6NCW0 530 aa23.42■■□□□ 1.34
NUP50-207ENST00000424634 USP17L4A6NCW7 530 aa23.42■■□□□ 1.34
NUP50-207ENST00000424634 CELF2O95319 508 aaKnown RBP23.42■■□□□ 1.34
NUP50-207ENST00000424634 KLRK1P26718 216 aa23.42■■□□□ 1.34
NUP50-207ENST00000424634 CHRNDQ07001 517 aa23.42■■□□□ 1.34
NUP50-207ENST00000424634 USP17L1Q7RTZ2 530 aa23.42■■□□□ 1.34
NUP50-207ENST00000424634 AGBL3Q8NEM8 1001 aa23.42■■□□□ 1.34
NUP50-207ENST00000424634 SRCIN1Q9C0H9 1055 aa23.42■■□□□ 1.34
NUP50-207ENST00000424634 ANKRD2Q9GZV1 360 aa23.42■■□□□ 1.34
NUP50-207ENST00000424634 TLL2Q9Y6L7 1015 aa23.42■■□□□ 1.34
NUP50-207ENST00000424634 ZNF804BA4D1E1 1349 aa23.41■■□□□ 1.34
NUP50-207ENST00000424634 CCER2I3L3R5 266 aa23.41■■□□□ 1.34
NUP50-207ENST00000424634 ZNF280AP59817 542 aaPredicted RBP23.41■■□□□ 1.34
NUP50-207ENST00000424634 IFIT5Q13325 482 aaKnown RBP23.41■■□□□ 1.34
NUP50-207ENST00000424634 SSH1Q8WYL5 1049 aa23.41■■□□□ 1.34
NUP50-207ENST00000424634 C9orf78Q9NZ63 289 aaPredicted RBP23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms