RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 LMOD1P29536 600 aaPredicted RBP27.05■■□□□ 1.92
CPNE1-211ENST00000420363 RARSP54136 660 aaKnown RBP27.05■■□□□ 1.92
CPNE1-211ENST00000420363 ANKRD18AQ8IVF6 992 aa27.05■■□□□ 1.92
CPNE1-211ENST00000420363 CNTROBQ8N137 903 aa27.05■■□□□ 1.92
CPNE1-211ENST00000420363 GREM2Q9H772 168 aa27.05■■□□□ 1.92
CPNE1-211ENST00000420363 PPIP5K2O43314 1243 aa27.04■■□□□ 1.92
CPNE1-211ENST00000420363 CSF1RP07333 972 aa27.04■■□□□ 1.92
CPNE1-211ENST00000420363 MAP1SQ66K74 1059 aaPredicted RBP27.04■■□□□ 1.92
CPNE1-211ENST00000420363 CCDC85AQ96PX6 553 aaPredicted RBP27.04■■□□□ 1.92
CPNE1-211ENST00000420363 KIF16BQ96L93 1317 aa27.04■■□□□ 1.92
CPNE1-211ENST00000420363 CNTNAP1P78357 1384 aa27.04■■□□□ 1.92
CPNE1-211ENST00000420363 UTYO14607 1347 aa27.03■■□□□ 1.92
CPNE1-211ENST00000420363 CAPN15O75808 1086 aa27.03■■□□□ 1.92
CPNE1-211ENST00000420363 KIAA2012Q0VF49 1180 aa27.03■■□□□ 1.92
CPNE1-211ENST00000420363 NIM1KQ8IY84 436 aa27.03■■□□□ 1.92
CPNE1-211ENST00000420363 PODXL2Q9NZ53 605 aa27.03■■□□□ 1.92
CPNE1-211ENST00000420363 C9orf78Q9NZ63 289 aaPredicted RBP27.03■■□□□ 1.92
CPNE1-211ENST00000420363 AOC3Q16853 763 aa27.01■■□□□ 1.91
CPNE1-211ENST00000420363 FAM161AQ3B820 660 aa27.01■■□□□ 1.91
CPNE1-211ENST00000420363 NSFL1CQ9UNZ2 370 aaKnown RBP27.01■■□□□ 1.91
CPNE1-211ENST00000420363 GPSM2P81274 684 aa27■■□□□ 1.91
CPNE1-211ENST00000420363 BSDC1Q9NW68 430 aaPredicted RBP27■■□□□ 1.91
CPNE1-211ENST00000420363 ITGA6P23229 1130 aa26.99■■□□□ 1.91
CPNE1-211ENST00000420363 VEGFBP49765 207 aa26.99■■□□□ 1.91
CPNE1-211ENST00000420363 FOXO4P98177 505 aa26.99■■□□□ 1.91
CPNE1-211ENST00000420363 API5Q9BZZ5 524 aaKnown RBP26.99■■□□□ 1.91
CPNE1-211ENST00000420363 XDHP47989 1333 aa26.98■■□□□ 1.91
CPNE1-211ENST00000420363 ARHGAP45Q92619 1136 aa26.98■■□□□ 1.91
CPNE1-211ENST00000420363 EYA3Q99504 573 aa26.98■■□□□ 1.91
CPNE1-211ENST00000420363 IGHMBP2P38935 993 aaKnown RBP26.97■■□□□ 1.91
CPNE1-211ENST00000420363 EPS15P42566 896 aa26.97■■□□□ 1.91
CPNE1-211ENST00000420363 SCNN1DP51172 638 aa26.97■■□□□ 1.91
CPNE1-211ENST00000420363 TBC1D16Q8TBP0 767 aa26.97■■□□□ 1.91
CPNE1-211ENST00000420363 POLLQ9UGP5 575 aa26.97■■□□□ 1.91
CPNE1-211ENST00000420363 NOB1Q9ULX3 412 aaKnown RBP26.97■■□□□ 1.91
CPNE1-211ENST00000420363 DEFB115Q30KQ5 88 aa26.96■■□□□ 1.91
CPNE1-211ENST00000420363 ANKIB1Q9P2G1 1089 aa26.96■■□□□ 1.91
CPNE1-211ENST00000420363 GGA1Q9UJY5 639 aa26.96■■□□□ 1.91
CPNE1-211ENST00000420363 A0A1B0GUL6 1792 aa26.96■■□□□ 1.91
CPNE1-211ENST00000420363 ANKRD18BA2A2Z9 1011 aa26.95■■□□□ 1.9
CPNE1-211ENST00000420363 CCT4P50991 539 aaKnown RBP26.95■■□□□ 1.9
CPNE1-211ENST00000420363 WASHC4Q2M389 1173 aa26.95■■□□□ 1.9
CPNE1-211ENST00000420363 AIDAQ96BJ3 306 aa26.95■■□□□ 1.9
CPNE1-211ENST00000420363 ZNRF3Q9ULT6 936 aa26.95■■□□□ 1.9
CPNE1-211ENST00000420363 C6orf229H3BNL8 230 aa26.94■■□□□ 1.9
CPNE1-211ENST00000420363 NBPF7P0C2Y1 421 aaPredicted RBP26.94■■□□□ 1.9
CPNE1-211ENST00000420363 IFIT5Q13325 482 aaKnown RBP26.94■■□□□ 1.9
CPNE1-211ENST00000420363 EPHA10Q5JZY3 1008 aa26.94■■□□□ 1.9
CPNE1-211ENST00000420363 USP50Q70EL3 339 aaPredicted RBP26.94■■□□□ 1.9
CPNE1-211ENST00000420363 ABT1Q9ULW3 272 aaKnown RBP26.94■■□□□ 1.9
CPNE1-211ENST00000420363 ADAMTSL1Q8N6G6 1762 aa26.94■■□□□ 1.9
CPNE1-211ENST00000420363 FOXN1O15353 648 aa26.93■■□□□ 1.9
CPNE1-211ENST00000420363 UFL1O94874 794 aa26.93■■□□□ 1.9
CPNE1-211ENST00000420363 LMBR1LQ6UX01 489 aa26.93■■□□□ 1.9
CPNE1-211ENST00000420363 SUCLG2Q96I99 432 aa26.93■■□□□ 1.9
CPNE1-211ENST00000420363 MPHOSPH8Q99549 860 aa26.93■■□□□ 1.9
CPNE1-211ENST00000420363 MINPP1Q9UNW1 487 aa26.93■■□□□ 1.9
CPNE1-211ENST00000420363 RASSF10A6NK89 507 aa26.92■■□□□ 1.9
CPNE1-211ENST00000420363 ATP2B4P23634 1241 aa26.91■■□□□ 1.9
CPNE1-211ENST00000420363 RABL6Q3YEC7 729 aaPredicted RBP26.91■■□□□ 1.9
CPNE1-211ENST00000420363 KAZALD1Q96I82 304 aa26.91■■□□□ 1.9
CPNE1-211ENST00000420363 USP44Q9H0E7 712 aa26.91■■□□□ 1.9
CPNE1-211ENST00000420363 MED23Q9ULK4 1368 aa26.9■■□□□ 1.9
CPNE1-211ENST00000420363 IPO8O15397 1037 aaKnown RBP26.9■■□□□ 1.9
CPNE1-211ENST00000420363 CXCL9Q07325 125 aa26.9■■□□□ 1.9
CPNE1-211ENST00000420363 CHMP3Q9Y3E7 222 aa26.9■■□□□ 1.9
CPNE1-211ENST00000420363 PSME4Q14997 1843 aa26.9■■□□□ 1.9
CPNE1-211ENST00000420363 CTCFP49711 727 aaPredicted RBP26.89■■□□□ 1.9
CPNE1-211ENST00000420363 CCDC57Q2TAC2 916 aa26.89■■□□□ 1.9
CPNE1-211ENST00000420363 ANKRD2Q9GZV1 360 aa26.89■■□□□ 1.9
CPNE1-211ENST00000420363 ADARB2Q9NS39 739 aaKnown RBP26.89■■□□□ 1.9
CPNE1-211ENST00000420363 GPRC5DQ9NZD1 345 aa26.89■■□□□ 1.9
CPNE1-211ENST00000420363 CIAPIN1Q6FI81 312 aa26.88■■□□□ 1.89
CPNE1-211ENST00000420363 ZC3H12CQ9C0D7 883 aaKnown RBP26.88■■□□□ 1.89
CPNE1-211ENST00000420363 PRDM10Q9NQV6 1147 aa26.88■■□□□ 1.89
CPNE1-211ENST00000420363 YDJCA8MPS7 323 aa26.87■■□□□ 1.89
CPNE1-211ENST00000420363 TNIP1Q15025 636 aa26.87■■□□□ 1.89
CPNE1-211ENST00000420363 BICC1Q9H694 974 aaKnown RBP26.87■■□□□ 1.89
CPNE1-211ENST00000420363 WBP1LQ9NX94 342 aa26.87■■□□□ 1.89
CPNE1-211ENST00000420363 WDR33Q9C0J8 1336 aaKnown RBP26.87■■□□□ 1.89
CPNE1-211ENST00000420363 RIMBP2O15034 1052 aa26.86■■□□□ 1.89
CPNE1-211ENST00000420363 ECE2O60344 883 aa26.86■■□□□ 1.89
CPNE1-211ENST00000420363 BCAR3O75815 825 aa26.86■■□□□ 1.89
CPNE1-211ENST00000420363 TRIM27P14373 513 aa26.86■■□□□ 1.89
CPNE1-211ENST00000420363 GMPSP49915 693 aaPredicted RBP26.86■■□□□ 1.89
CPNE1-211ENST00000420363 FMR1Q06787 632 aaKnown RBP eCLIP26.86■■□□□ 1.897e-7■■■□□ 18.6
CPNE1-211ENST00000420363 INTS3Q68E01 1043 aaKnown RBP26.86■■□□□ 1.89
CPNE1-211ENST00000420363 ATF7IPQ6VMQ6 1270 aa26.86■■□□□ 1.89
CPNE1-211ENST00000420363 LEMD3Q9Y2U8 911 aa26.86■■□□□ 1.89
CPNE1-211ENST00000420363 SCN9AQ15858 1988 aa26.86■■□□□ 1.89
CPNE1-211ENST00000420363 RAD17O75943 681 aa26.85■■□□□ 1.89
CPNE1-211ENST00000420363 ANKRD44Q8N8A2 993 aa26.85■■□□□ 1.89
CPNE1-211ENST00000420363 GPR101Q96P66 508 aaPredicted RBP26.85■■□□□ 1.89
CPNE1-211ENST00000420363 DBNDD1Q9H9R9 158 aa26.85■■□□□ 1.89
CPNE1-211ENST00000420363 ZNF609O15014 1411 aa26.84■■□□□ 1.89
CPNE1-211ENST00000420363 TRAF5O00463 557 aa26.84■■□□□ 1.89
CPNE1-211ENST00000420363 MAP2K1Q02750 393 aaPredicted RBP26.84■■□□□ 1.89
CPNE1-211ENST00000420363 CHRNDQ07001 517 aa26.84■■□□□ 1.89
CPNE1-211ENST00000420363 TAF7LQ5H9L4 462 aa26.84■■□□□ 1.89
CPNE1-211ENST00000420363 PAXIP1Q6ZW49 1069 aaPredicted RBP26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms