RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 TTLL11Q8NHH1 800 aa14.16□□□□□ -0.14
SSBP3-206ENST00000420121 TBC1D16Q8TBP0 767 aa14.16□□□□□ -0.14
SSBP3-206ENST00000420121 RTL9Q8NET4 1388 aa14.16□□□□□ -0.14
SSBP3-206ENST00000420121 POLR2AP24928 1970 aaKnown RBP14.16□□□□□ -0.14
SSBP3-206ENST00000420121 CNTNAP1P78357 1384 aa14.15□□□□□ -0.14
SSBP3-206ENST00000420121 SHTN1A0MZ66 631 aa14.15□□□□□ -0.14
SSBP3-206ENST00000420121 HSP90B1P14625 803 aaKnown RBP14.15□□□□□ -0.14
SSBP3-206ENST00000420121 FMR1Q06787 632 aaKnown RBP eCLIP14.15□□□□□ -0.14
SSBP3-206ENST00000420121 NEXNQ0ZGT2 675 aa14.15□□□□□ -0.14
SSBP3-206ENST00000420121 WASHC4Q2M389 1173 aa14.15□□□□□ -0.14
SSBP3-206ENST00000420121 USP50Q70EL3 339 aaPredicted RBP14.15□□□□□ -0.14
SSBP3-206ENST00000420121 DBNDD1Q9H9R9 158 aa14.15□□□□□ -0.14
SSBP3-206ENST00000420121 ADARB2Q9NS39 739 aaKnown RBP14.15□□□□□ -0.14
SSBP3-206ENST00000420121 C6orf229H3BNL8 230 aa14.14□□□□□ -0.15
SSBP3-206ENST00000420121 RIMBP2O15034 1052 aa14.14□□□□□ -0.15
SSBP3-206ENST00000420121 HIRAP54198 1017 aaPredicted RBP14.14□□□□□ -0.15
SSBP3-206ENST00000420121 GCKRQ14397 625 aa14.14□□□□□ -0.15
SSBP3-206ENST00000420121 UBE3BQ7Z3V4 1068 aa14.14□□□□□ -0.15
SSBP3-206ENST00000420121 DNAAF4Q8WXU2 420 aa14.14□□□□□ -0.15
SSBP3-206ENST00000420121 GREM2Q9H772 168 aa14.14□□□□□ -0.15
SSBP3-206ENST00000420121 KCNQ5Q9NR82 932 aa14.14□□□□□ -0.15
SSBP3-206ENST00000420121 MKRN1Q9UHC7 482 aaKnown RBP14.14□□□□□ -0.15
SSBP3-206ENST00000420121 THSD7BQ9C0I4 1608 aa14.13□□□□□ -0.15
SSBP3-206ENST00000420121 WTIPA6NIX2 430 aaPredicted RBP14.13□□□□□ -0.15
SSBP3-206ENST00000420121 TMEM88BA6NKF7 163 aa14.13□□□□□ -0.15
SSBP3-206ENST00000420121 PSMD14O00487 310 aa14.13□□□□□ -0.15
SSBP3-206ENST00000420121 ECE2O60344 883 aa14.13□□□□□ -0.15
SSBP3-206ENST00000420121 FKBP5Q13451 457 aaPredicted RBP14.13□□□□□ -0.15
SSBP3-206ENST00000420121 TNIP1Q15025 636 aa14.13□□□□□ -0.15
SSBP3-206ENST00000420121 LINS1Q8NG48 757 aa14.13□□□□□ -0.15
SSBP3-206ENST00000420121 TRPM4Q8TD43 1214 aa14.13□□□□□ -0.15
SSBP3-206ENST00000420121 PLA2G12BQ9BX93 195 aa14.13□□□□□ -0.15
SSBP3-206ENST00000420121 PGAP2Q9UHJ9 254 aa14.13□□□□□ -0.15
SSBP3-206ENST00000420121 DOK7Q18PE1 504 aa14.12□□□□□ -0.15
SSBP3-206ENST00000420121 ANKRD18AQ8IVF6 992 aa14.12□□□□□ -0.15
SSBP3-206ENST00000420121 MYH16Q9H6N6 1097 aa14.12□□□□□ -0.15
SSBP3-206ENST00000420121 ZBTB12Q9Y330 459 aaPredicted RBP14.12□□□□□ -0.15
SSBP3-206ENST00000420121 F6X3S4 739 aa14.11□□□□□ -0.15
SSBP3-206ENST00000420121 TRAF5O00463 557 aa14.11□□□□□ -0.15
SSBP3-206ENST00000420121 ZNF609O15014 1411 aa14.11□□□□□ -0.15
SSBP3-206ENST00000420121 UFL1O94874 794 aa14.11□□□□□ -0.15
SSBP3-206ENST00000420121 CSF1RP07333 972 aa14.11□□□□□ -0.15
SSBP3-206ENST00000420121 BEND3Q5T5X7 828 aa14.11□□□□□ -0.15
SSBP3-206ENST00000420121 DPF2Q92785 391 aa14.11□□□□□ -0.15
SSBP3-206ENST00000420121 EYA3Q99504 573 aa14.11□□□□□ -0.15
SSBP3-206ENST00000420121 CNOT7Q9UIV1 285 aaKnown RBP14.11□□□□□ -0.15
SSBP3-206ENST00000420121 GGA1Q9UJY5 639 aa14.11□□□□□ -0.15
SSBP3-206ENST00000420121 U3KPZ7 1027 aaPredicted RBP14.11□□□□□ -0.15
SSBP3-206ENST00000420121 XDHP47989 1333 aa14.11□□□□□ -0.15
SSBP3-206ENST00000420121 RASSF10A6NK89 507 aa14.1□□□□□ -0.15
SSBP3-206ENST00000420121 EGFRP00533 1210 aa14.1□□□□□ -0.15
SSBP3-206ENST00000420121 HSPA1AP0DMV8 641 aaKnown RBP14.1□□□□□ -0.15
SSBP3-206ENST00000420121 HSPA1BP0DMV9 641 aaKnown RBP14.1□□□□□ -0.15
SSBP3-206ENST00000420121 CST9Q5W186 159 aa14.1□□□□□ -0.15
SSBP3-206ENST00000420121 MICALL2Q8IY33 904 aa14.1□□□□□ -0.15
SSBP3-206ENST00000420121 CDC5LQ99459 802 aaKnown RBP14.1□□□□□ -0.15
SSBP3-206ENST00000420121 BCL2L13Q9BXK5 485 aa14.1□□□□□ -0.15
SSBP3-206ENST00000420121 BSDC1Q9NW68 430 aaPredicted RBP14.1□□□□□ -0.15
SSBP3-206ENST00000420121 ANKIB1Q9P2G1 1089 aa14.1□□□□□ -0.15
SSBP3-206ENST00000420121 MINPP1Q9UNW1 487 aa14.1□□□□□ -0.15
SSBP3-206ENST00000420121 VIL1P09327 827 aaKnown RBP14.09□□□□□ -0.15
SSBP3-206ENST00000420121 VEGFBP49765 207 aa14.09□□□□□ -0.15
SSBP3-206ENST00000420121 FAM161AQ3B820 660 aa14.09□□□□□ -0.15
SSBP3-206ENST00000420121 IFFO2Q5TF58 517 aa14.09□□□□□ -0.15
SSBP3-206ENST00000420121 ZC3H12CQ9C0D7 883 aaKnown RBP14.09□□□□□ -0.15
SSBP3-206ENST00000420121 ITGA6P23229 1130 aa14.08□□□□□ -0.16
SSBP3-206ENST00000420121 FOXO4P98177 505 aa14.08□□□□□ -0.16
SSBP3-206ENST00000420121 COL13A1Q5TAT6 717 aaPredicted RBP14.08□□□□□ -0.16
SSBP3-206ENST00000420121 SAMD7Q7Z3H4 446 aa14.08□□□□□ -0.16
SSBP3-206ENST00000420121 ZC3H15Q8WU90 426 aaKnown RBP14.08□□□□□ -0.16
SSBP3-206ENST00000420121 GLIS2Q9BZE0 524 aaPredicted RBP14.08□□□□□ -0.16
SSBP3-206ENST00000420121 MED23Q9ULK4 1368 aa14.08□□□□□ -0.16
SSBP3-206ENST00000420121 ATP2B4P23634 1241 aa14.07□□□□□ -0.16
SSBP3-206ENST00000420121 RPS12P25398 132 aaKnown RBP14.07□□□□□ -0.16
SSBP3-206ENST00000420121 H7C1D1 291 aa14.06□□□□□ -0.16
SSBP3-206ENST00000420121 CCT4P50991 539 aaKnown RBP14.06□□□□□ -0.16
SSBP3-206ENST00000420121 DEFB115Q30KQ5 88 aa14.06□□□□□ -0.16
SSBP3-206ENST00000420121 EPHA10Q5JZY3 1008 aa14.06□□□□□ -0.16
SSBP3-206ENST00000420121 TXNRD3Q86VQ6 643 aa14.06□□□□□ -0.16
SSBP3-206ENST00000420121 GMLQ99445 158 aa14.06□□□□□ -0.16
SSBP3-206ENST00000420121 KLRK1P26718 216 aa14.05□□□□□ -0.16
SSBP3-206ENST00000420121 SLFN5Q08AF3 891 aa14.05□□□□□ -0.16
SSBP3-206ENST00000420121 TBC1D10BQ4KMP7 808 aaPredicted RBP14.05□□□□□ -0.16
SSBP3-206ENST00000420121 DLK2Q6UY11 383 aa14.05□□□□□ -0.16
SSBP3-206ENST00000420121 MRPL50Q8N5N7 158 aaKnown RBP14.05□□□□□ -0.16
SSBP3-206ENST00000420121 TLL2Q9Y6L7 1015 aa14.05□□□□□ -0.16
SSBP3-206ENST00000420121 IRS2Q9Y4H2 1338 aa14.05□□□□□ -0.16
SSBP3-206ENST00000420121 GRM8O00222 908 aa14.04□□□□□ -0.16
SSBP3-206ENST00000420121 IGHMBP2P38935 993 aaKnown RBP14.04□□□□□ -0.16
SSBP3-206ENST00000420121 ZNF280AP59817 542 aaPredicted RBP14.04□□□□□ -0.16
SSBP3-206ENST00000420121 RSBN1LQ6PCB5 846 aaPredicted RBP14.04□□□□□ -0.16
SSBP3-206ENST00000420121 PODNQ7Z5L7 613 aa14.04□□□□□ -0.16
SSBP3-206ENST00000420121 ABT1Q9ULW3 272 aaKnown RBP14.04□□□□□ -0.16
SSBP3-206ENST00000420121 WDR33Q9C0J8 1336 aaKnown RBP14.04□□□□□ -0.16
SSBP3-206ENST00000420121 E9PSI1 815 aa14.03□□□□□ -0.16
SSBP3-206ENST00000420121 FOXN1O15353 648 aa14.03□□□□□ -0.16
SSBP3-206ENST00000420121 ALDH1L1O75891 902 aa14.03□□□□□ -0.16
SSBP3-206ENST00000420121 CDC37L1Q7L3B6 337 aa14.03□□□□□ -0.16
SSBP3-206ENST00000420121 TRMT2AQ8IZ69 625 aaKnown RBP14.03□□□□□ -0.16
SSBP3-206ENST00000420121 AGBL3Q8NEM8 1001 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms