RNA–Protein interactions for RNA: ENST00000417640.6

NECAB1-201, Transcript of N-terminal EF-hand calcium binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECAB1, Length 5,289 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB1-201ENST00000417640 MSH6P52701 1360 aa21.42■■□□□ 1.02
NECAB1-201ENST00000417640 DNMT1P26358 1616 aaKnown RBP21.42■■□□□ 1.02
NECAB1-201ENST00000417640 IFFO1Q0D2I5 559 aa21.42■■□□□ 1.02
NECAB1-201ENST00000417640 LMBR1LQ6UX01 489 aa21.42■■□□□ 1.02
NECAB1-201ENST00000417640 RMND1Q9NWS8 449 aa21.42■■□□□ 1.02
NECAB1-201ENST00000417640 MARCKSP29966 332 aaPredicted RBP21.42■■□□□ 1.02
NECAB1-201ENST00000417640 NPATQ14207 1427 aa21.41■■□□□ 1.02
NECAB1-201ENST00000417640 SPAG1Q07617 926 aa21.41■■□□□ 1.02
NECAB1-201ENST00000417640 DYDC1Q8WWB3 177 aa21.41■■□□□ 1.02
NECAB1-201ENST00000417640 KRT23Q9C075 422 aa21.41■■□□□ 1.02
NECAB1-201ENST00000417640 LMOD1P29536 600 aaPredicted RBP21.41■■□□□ 1.02
NECAB1-201ENST00000417640 KRT28Q7Z3Y7 464 aa21.41■■□□□ 1.02
NECAB1-201ENST00000417640 OTUD7AQ8TE49 926 aaPredicted RBP21.41■■□□□ 1.02
NECAB1-201ENST00000417640 FLT4P35916 1363 aa21.41■■□□□ 1.02
NECAB1-201ENST00000417640 TMTC2Q8N394 836 aa21.41■■□□□ 1.02
NECAB1-201ENST00000417640 DESP17661 470 aa21.41■■□□□ 1.02
NECAB1-201ENST00000417640 JADE2Q9NQC1 790 aa21.41■■□□□ 1.02
NECAB1-201ENST00000417640 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.4■■□□□ 1.02
NECAB1-201ENST00000417640 IDEP14735 1019 aa21.4■■□□□ 1.02
NECAB1-201ENST00000417640 CETN2P41208 172 aa21.4■■□□□ 1.02
NECAB1-201ENST00000417640 CTAGE15A4D2H0 777 aa21.4■■□□□ 1.02
NECAB1-201ENST00000417640 CTAGE8P0CG41 777 aa21.4■■□□□ 1.02
NECAB1-201ENST00000417640 CTAGE6Q86UF2 777 aa21.4■■□□□ 1.02
NECAB1-201ENST00000417640 CTAGE4Q8IX94 777 aa21.4■■□□□ 1.02
NECAB1-201ENST00000417640 TRIM21P19474 475 aaKnown RBP21.39■■□□□ 1.02
NECAB1-201ENST00000417640 HLTFQ14527 1009 aaKnown RBP eCLIP21.39■■□□□ 1.02
NECAB1-201ENST00000417640 HSP90AA4PQ58FG1 418 aa21.39■■□□□ 1.02
NECAB1-201ENST00000417640 TRIM47Q96LD4 638 aa21.39■■□□□ 1.02
NECAB1-201ENST00000417640 UBA5Q9GZZ9 404 aa21.39■■□□□ 1.02
NECAB1-201ENST00000417640 GBP2P32456 591 aaPredicted RBP21.39■■□□□ 1.01
NECAB1-201ENST00000417640 CNNM2Q9H8M5 875 aa21.39■■□□□ 1.01
NECAB1-201ENST00000417640 PAG1Q9NWQ8 432 aa21.39■■□□□ 1.01
NECAB1-201ENST00000417640 TRIM35Q9UPQ4 493 aa21.39■■□□□ 1.01
NECAB1-201ENST00000417640 PRC1O43663 620 aa21.39■■□□□ 1.01
NECAB1-201ENST00000417640 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.39■■□□□ 1.01
NECAB1-201ENST00000417640 V9GYY5 206 aaPredicted RBP21.39■■□□□ 1.01
NECAB1-201ENST00000417640 PDE4BQ07343 736 aa21.39■■□□□ 1.01
NECAB1-201ENST00000417640 CCDC40Q4G0X9 1142 aa21.39■■□□□ 1.01
NECAB1-201ENST00000417640 RRAGBQ5VZM2 374 aa21.39■■□□□ 1.01
NECAB1-201ENST00000417640 DHX32Q7L7V1 743 aaKnown RBP21.39■■□□□ 1.01
NECAB1-201ENST00000417640 CCDC113Q9H0I3 377 aa21.39■■□□□ 1.01
NECAB1-201ENST00000417640 AFMP43652 599 aa21.38■■□□□ 1.01
NECAB1-201ENST00000417640 CEBPAP49715 358 aaPredicted RBP21.38■■□□□ 1.01
NECAB1-201ENST00000417640 GTPBP4Q9BZE4 634 aaKnown RBP21.38■■□□□ 1.01
NECAB1-201ENST00000417640 PTPDC1A2A3K4 754 aa21.38■■□□□ 1.01
NECAB1-201ENST00000417640 TSPY2A6NKD2 308 aa21.38■■□□□ 1.01
NECAB1-201ENST00000417640 ATP2B3Q16720 1220 aa21.38■■□□□ 1.01
NECAB1-201ENST00000417640 MAP2K1Q02750 393 aaPredicted RBP21.38■■□□□ 1.01
NECAB1-201ENST00000417640 CKAP4Q07065 602 aaKnown RBP21.38■■□□□ 1.01
NECAB1-201ENST00000417640 RTN1Q16799 776 aa21.38■■□□□ 1.01
NECAB1-201ENST00000417640 KIAA0556O60303 1618 aa21.38■■□□□ 1.01
NECAB1-201ENST00000417640 NBPF7P0C2Y1 421 aaPredicted RBP21.37■■□□□ 1.01
NECAB1-201ENST00000417640 DNAI2Q9GZS0 605 aa21.37■■□□□ 1.01
NECAB1-201ENST00000417640 KAT14Q9H8E8 782 aa21.37■■□□□ 1.01
NECAB1-201ENST00000417640 LIG1P18858 919 aa21.37■■□□□ 1.01
NECAB1-201ENST00000417640 SSR1P43307 286 aaKnown RBP21.37■■□□□ 1.01
NECAB1-201ENST00000417640 ADAMTS12P58397 1594 aa21.37■■□□□ 1.01
NECAB1-201ENST00000417640 RNF187Q5TA31 235 aaPredicted RBP21.37■■□□□ 1.01
NECAB1-201ENST00000417640 GIMAP7Q8NHV1 300 aa21.37■■□□□ 1.01
NECAB1-201ENST00000417640 CDC5LQ99459 802 aaKnown RBP21.37■■□□□ 1.01
NECAB1-201ENST00000417640 AKR1B10O60218 316 aa21.37■■□□□ 1.01
NECAB1-201ENST00000417640 CCDC175P0C221 793 aa21.37■■□□□ 1.01
NECAB1-201ENST00000417640 POTEJP0CG39 1038 aa21.37■■□□□ 1.01
NECAB1-201ENST00000417640 SPECC1Q5M775 1068 aa21.37■■□□□ 1.01
NECAB1-201ENST00000417640 ATL3Q6DD88 541 aa21.37■■□□□ 1.01
NECAB1-201ENST00000417640 ANKIB1Q9P2G1 1089 aa21.37■■□□□ 1.01
NECAB1-201ENST00000417640 APOBRQ0VD83 1088 aa21.36■■□□□ 1.01
NECAB1-201ENST00000417640 ABCC1P33527 1531 aa21.36■■□□□ 1.01
NECAB1-201ENST00000417640 CYLC1P35663 651 aaPredicted RBP21.36■■□□□ 1.01
NECAB1-201ENST00000417640 DHX37Q8IY37 1157 aaKnown RBP21.36■■□□□ 1.01
NECAB1-201ENST00000417640 BCCIPQ9P287 314 aaKnown RBP eCLIP21.36■■□□□ 1.01
NECAB1-201ENST00000417640 MAP3K5Q99683 1374 aa21.35■■□□□ 1.01
NECAB1-201ENST00000417640 SLC39A6Q13433 755 aa21.35■■□□□ 1.01
NECAB1-201ENST00000417640 CWF19L2Q2TBE0 894 aaKnown RBP21.35■■□□□ 1.01
NECAB1-201ENST00000417640 BRAPQ7Z569 592 aa21.35■■□□□ 1.01
NECAB1-201ENST00000417640 IFNKQ9P0W0 207 aa21.35■■□□□ 1.01
NECAB1-201ENST00000417640 TNIP1Q15025 636 aa21.35■■□□□ 1.01
NECAB1-201ENST00000417640 CCDC96Q2M329 555 aa21.35■■□□□ 1.01
NECAB1-201ENST00000417640 FEZ1Q99689 392 aa21.35■■□□□ 1.01
NECAB1-201ENST00000417640 ADGRL2O95490 1459 aa21.35■■□□□ 1.01
NECAB1-201ENST00000417640 CPA1P15085 419 aa21.35■■□□□ 1.01
NECAB1-201ENST00000417640 CRACR2BQ8N4Y2 399 aaPredicted RBP21.35■■□□□ 1.01
NECAB1-201ENST00000417640 CEP112Q8N8E3 955 aa21.35■■□□□ 1.01
NECAB1-201ENST00000417640 ESR2Q92731 530 aa21.35■■□□□ 1.01
NECAB1-201ENST00000417640 TNRQ92752 1358 aa21.35■■□□□ 1.01
NECAB1-201ENST00000417640 MCM6Q14566 821 aa21.35■■□□□ 1.01
NECAB1-201ENST00000417640 G2E3Q7L622 706 aa21.35■■□□□ 1.01
NECAB1-201ENST00000417640 MATR3P43243 847 aaKnown RBP eCLIP21.35■■□□□ 1.01
NECAB1-201ENST00000417640 EYA1Q99502 592 aa21.35■■□□□ 1.01
NECAB1-201ENST00000417640 TMCO5BA8MYB1 307 aa21.34■■□□□ 1.01
NECAB1-201ENST00000417640 RNF113AO15541 343 aaKnown RBP21.34■■□□□ 1.01
NECAB1-201ENST00000417640 EZRP15311 586 aaKnown RBP21.34■■□□□ 1.01
NECAB1-201ENST00000417640 GOPCQ9HD26 462 aa21.34■■□□□ 1.01
NECAB1-201ENST00000417640 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.34■■□□□ 1.01
NECAB1-201ENST00000417640 LMBRD1Q9NUN5 540 aa21.34■■□□□ 1.01
NECAB1-201ENST00000417640 AOX1Q06278 1338 aa21.34■■□□□ 1.01
NECAB1-201ENST00000417640 SLC9C2Q5TAH2 1124 aa21.34■■□□□ 1.01
NECAB1-201ENST00000417640 GOLGA1Q92805 767 aa21.34■■□□□ 1.01
NECAB1-201ENST00000417640 EXOC1Q9NV70 894 aa21.34■■□□□ 1.01
NECAB1-201ENST00000417640 RIMS2Q9UQ26 1411 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms