RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 J3QW42 95 aa8.26□□□□□ -1.09
PTPRK-209ENST00000415046 ATP2B4P23634 1241 aa8.26□□□□□ -1.09
PTPRK-209ENST00000415046 ZAP70P43403 619 aa8.26□□□□□ -1.09
PTPRK-209ENST00000415046 USP21Q9UK80 565 aa8.26□□□□□ -1.09
PTPRK-209ENST00000415046 ARID3CA6NKF2 412 aa8.25□□□□□ -1.09
PTPRK-209ENST00000415046 UBAP1LF5GYI3 381 aa8.25□□□□□ -1.09
PTPRK-209ENST00000415046 Q8N3U1 123 aa8.25□□□□□ -1.09
PTPRK-209ENST00000415046 ABTB2Q8N961 1025 aa8.25□□□□□ -1.09
PTPRK-209ENST00000415046 OR13H1Q8NG92 308 aa8.25□□□□□ -1.09
PTPRK-209ENST00000415046 DEAF1O75398 565 aaPredicted RBP8.24□□□□□ -1.09
PTPRK-209ENST00000415046 GHRHP01286 108 aa8.24□□□□□ -1.09
PTPRK-209ENST00000415046 H2AFB1P0C5Y9 115 aa8.24□□□□□ -1.09
PTPRK-209ENST00000415046 H2AFB2P0C5Z0 115 aa8.24□□□□□ -1.09
PTPRK-209ENST00000415046 SSBP4Q9BWG4 385 aaPredicted RBP8.24□□□□□ -1.09
PTPRK-209ENST00000415046 RBSNQ9H1K0 784 aa8.24□□□□□ -1.09
PTPRK-209ENST00000415046 GTF3C3Q9Y5Q9 886 aa8.24□□□□□ -1.09
PTPRK-209ENST00000415046 ZBTB39O15060 712 aa8.23□□□□□ -1.09
PTPRK-209ENST00000415046 GPR152Q8TDT2 470 aa8.23□□□□□ -1.09
PTPRK-209ENST00000415046 SEPT3Q9UH03 358 aa8.23□□□□□ -1.09
PTPRK-209ENST00000415046 FNDC3AQ9Y2H6 1198 aaKnown RBP8.23□□□□□ -1.09
PTPRK-209ENST00000415046 DLL1O00548 723 aa8.22□□□□□ -1.09
PTPRK-209ENST00000415046 IGF2-ASQ6U949 168 aa8.22□□□□□ -1.09
PTPRK-209ENST00000415046 SHROOM4Q9ULL8 1493 aa8.21□□□□□ -1.09
PTPRK-209ENST00000415046 ZMYM1Q5SVZ6 1142 aa8.21□□□□□ -1.1
PTPRK-209ENST00000415046 GDF6Q6KF10 455 aaPredicted RBP8.21□□□□□ -1.1
PTPRK-209ENST00000415046 CCDC82Q8N4S0 544 aa8.21□□□□□ -1.1
PTPRK-209ENST00000415046 SRA1Q9HD15 236 aaKnown RBP8.21□□□□□ -1.1
PTPRK-209ENST00000415046 COL13A1Q5TAT6 717 aaPredicted RBP8.2□□□□□ -1.1
PTPRK-209ENST00000415046 CACTIN-AS1Q8N1I8 211 aa8.2□□□□□ -1.1
PTPRK-209ENST00000415046 HELQQ8TDG4 1101 aa8.2□□□□□ -1.1
PTPRK-209ENST00000415046 WFDC12Q8WWY7 111 aa8.2□□□□□ -1.1
PTPRK-209ENST00000415046 TRIM33Q9UPN9 1127 aa8.2□□□□□ -1.1
PTPRK-209ENST00000415046 KIF4AO95239 1232 aa8.19□□□□□ -1.1
PTPRK-209ENST00000415046 NOS3P29474 1203 aa8.19□□□□□ -1.1
PTPRK-209ENST00000415046 HYAL2Q12891 473 aa8.19□□□□□ -1.1
PTPRK-209ENST00000415046 FOXD4L6Q3SYB3 417 aaPredicted RBP8.19□□□□□ -1.1
PTPRK-209ENST00000415046 PRSS36Q5K4E3 855 aa8.19□□□□□ -1.1
PTPRK-209ENST00000415046 TTC39BQ5VTQ0 682 aaPredicted RBP8.19□□□□□ -1.1
PTPRK-209ENST00000415046 FOXD4L3Q6VB84 417 aaPredicted RBP8.19□□□□□ -1.1
PTPRK-209ENST00000415046 MAP4K3Q8IVH8 894 aa8.19□□□□□ -1.1
PTPRK-209ENST00000415046 IL22RA1Q8N6P7 574 aa8.19□□□□□ -1.1
PTPRK-209ENST00000415046 TP53INP1Q96A56 240 aa8.19□□□□□ -1.1
PTPRK-209ENST00000415046 ABI2Q9NYB9 513 aaPredicted RBP8.19□□□□□ -1.1
PTPRK-209ENST00000415046 TMEM88BA6NKF7 163 aa8.18□□□□□ -1.1
PTPRK-209ENST00000415046 PPP1R15AO75807 674 aaPredicted RBP8.18□□□□□ -1.1
PTPRK-209ENST00000415046 IREB2P48200 963 aaKnown RBP8.18□□□□□ -1.1
PTPRK-209ENST00000415046 SETDB1Q15047 1291 aa8.18□□□□□ -1.1
PTPRK-209ENST00000415046 PDE12Q6L8Q7 609 aaKnown RBP8.18□□□□□ -1.1
PTPRK-209ENST00000415046 DCAF11Q8TEB1 546 aa8.18□□□□□ -1.1
PTPRK-209ENST00000415046 MUC3BQ9H195 1237 aa8.18□□□□□ -1.1
PTPRK-209ENST00000415046 ATP11AP98196 1134 aa8.17□□□□□ -1.1
PTPRK-209ENST00000415046 NUDT16Q96DE0 195 aaKnown RBP8.17□□□□□ -1.1
PTPRK-209ENST00000415046 SCNN1AP37088 669 aa8.16□□□□□ -1.1
PTPRK-209ENST00000415046 ATCAYQ86WG3 371 aa8.16□□□□□ -1.1
PTPRK-209ENST00000415046 MEGF10Q96KG7 1140 aa8.16□□□□□ -1.1
PTPRK-209ENST00000415046 SPACA7Q96KW9 195 aa8.16□□□□□ -1.1
PTPRK-209ENST00000415046 MRPL18Q9H0U6 180 aaKnown RBP8.16□□□□□ -1.1
PTPRK-209ENST00000415046 C1orf115Q9H7X2 142 aa8.16□□□□□ -1.1
PTPRK-209ENST00000415046 ELP3Q9H9T3 547 aa8.16□□□□□ -1.1
PTPRK-209ENST00000415046 PPME1Q9Y570 386 aa8.16□□□□□ -1.1
PTPRK-209ENST00000415046 SMNDC1O75940 238 aaKnown RBP eCLIP8.15□□□□□ -1.1
PTPRK-209ENST00000415046 CYP2E1P05181 493 aaPredicted RBP8.15□□□□□ -1.1
PTPRK-209ENST00000415046 RPLP1P05386 114 aaKnown RBP8.15□□□□□ -1.1
PTPRK-209ENST00000415046 SSFA2P28290 1259 aa8.15□□□□□ -1.1
PTPRK-209ENST00000415046 TMEM130Q8N3G9 435 aa8.15□□□□□ -1.1
PTPRK-209ENST00000415046 AKTIPQ9H8T0 292 aa8.15□□□□□ -1.1
PTPRK-209ENST00000415046 TMEM63CQ9P1W3 806 aa8.15□□□□□ -1.1
PTPRK-209ENST00000415046 F8W735 103 aaPredicted RBP8.14□□□□□ -1.11
PTPRK-209ENST00000415046 CEP135Q66GS9 1140 aa8.14□□□□□ -1.11
PTPRK-209ENST00000415046 ZNF438Q7Z4V0 828 aa8.14□□□□□ -1.11
PTPRK-209ENST00000415046 RASSF4Q9H2L5 321 aa8.14□□□□□ -1.11
PTPRK-209ENST00000415046 NOM1Q5C9Z4 860 aaKnown RBP8.13□□□□□ -1.11
PTPRK-209ENST00000415046 XKR5Q6UX68 686 aa8.13□□□□□ -1.11
PTPRK-209ENST00000415046 Q6ZS46 218 aa8.13□□□□□ -1.11
PTPRK-209ENST00000415046 DZIP1LQ8IYY4 767 aaKnown RBP8.13□□□□□ -1.11
PTPRK-209ENST00000415046 CEP120Q8N960 986 aa8.13□□□□□ -1.11
PTPRK-209ENST00000415046 GTF3C2Q8WUA4 911 aaPredicted RBP8.13□□□□□ -1.11
PTPRK-209ENST00000415046 EDEM1Q92611 657 aa8.13□□□□□ -1.11
PTPRK-209ENST00000415046 PBX4Q9BYU1 374 aa8.13□□□□□ -1.11
PTPRK-209ENST00000415046 PDGFAP04085 211 aa8.12□□□□□ -1.11
PTPRK-209ENST00000415046 MPSTP25325 297 aa8.12□□□□□ -1.11
PTPRK-209ENST00000415046 CDC27P30260 824 aa8.12□□□□□ -1.11
PTPRK-209ENST00000415046 EIF1AXP47813 144 aaKnown RBP8.12□□□□□ -1.11
PTPRK-209ENST00000415046 ADAMTSL4Q6UY14 1074 aa8.12□□□□□ -1.11
PTPRK-209ENST00000415046 NCAPG2Q86XI2 1143 aa8.12□□□□□ -1.11
PTPRK-209ENST00000415046 LACRTQ9GZZ8 138 aa8.12□□□□□ -1.11
PTPRK-209ENST00000415046 CNTN3Q9P232 1028 aa8.12□□□□□ -1.11
PTPRK-209ENST00000415046 EIF4G1Q04637 1599 aaKnown RBP8.12□□□□□ -1.11
PTPRK-209ENST00000415046 SCO2A0A1W2PP80 73 aa8.11□□□□□ -1.11
PTPRK-209ENST00000415046 TM4SF5O14894 197 aa8.11□□□□□ -1.11
PTPRK-209ENST00000415046 PCSK2P16519 638 aa8.11□□□□□ -1.11
PTPRK-209ENST00000415046 MZF1P28698 734 aaPredicted RBP8.11□□□□□ -1.11
PTPRK-209ENST00000415046 DNM1Q05193 864 aaKnown RBP8.11□□□□□ -1.11
PTPRK-209ENST00000415046 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.11□□□□□ -1.11
PTPRK-209ENST00000415046 GALNT11Q8NCW6 608 aa8.11□□□□□ -1.11
PTPRK-209ENST00000415046 KANSL3Q9P2N6 904 aa8.11□□□□□ -1.11
PTPRK-209ENST00000415046 CC2D2AQ9P2K1 1620 aa8.11□□□□□ -1.11
PTPRK-209ENST00000415046 LINC01387J3KSC0 135 aa8.1□□□□□ -1.11
PTPRK-209ENST00000415046 ALX3O95076 343 aa8.1□□□□□ -1.11
PTPRK-209ENST00000415046 NPR3P17342 541 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms