RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 ITGA6P23229 1130 aa18.42■□□□□ 0.54
LRCH3-202ENST00000414675 ATP6V1AP38606 617 aa18.42■□□□□ 0.54
LRCH3-202ENST00000414675 KLHL40Q2TBA0 621 aa18.42■□□□□ 0.54
LRCH3-202ENST00000414675 BARGINQ6ZT62 677 aa18.42■□□□□ 0.54
LRCH3-202ENST00000414675 ZNF34Q8IZ26 560 aa18.42■□□□□ 0.54
LRCH3-202ENST00000414675 XAGE2Q96GT9 111 aa18.42■□□□□ 0.54
LRCH3-202ENST00000414675 TCEANC2Q96MN5 208 aa18.42■□□□□ 0.54
LRCH3-202ENST00000414675 SH3TC1Q8TE82 1336 aa18.41■□□□□ 0.54
LRCH3-202ENST00000414675 LOC102724428A0A0B4J2F2 783 aa18.41■□□□□ 0.54
LRCH3-202ENST00000414675 CRKLP46109 303 aaKnown RBP18.41■□□□□ 0.54
LRCH3-202ENST00000414675 SIK1P57059 783 aa18.41■□□□□ 0.54
LRCH3-202ENST00000414675 CCDC87Q9NVE4 849 aa18.41■□□□□ 0.54
LRCH3-202ENST00000414675 KCNQ2O43526 872 aa18.4■□□□□ 0.54
LRCH3-202ENST00000414675 PRPF40AO75400 957 aaKnown RBP18.4■□□□□ 0.54
LRCH3-202ENST00000414675 RNF20Q5VTR2 975 aa18.4■□□□□ 0.54
LRCH3-202ENST00000414675 CCDC83Q8IWF9 413 aa18.4■□□□□ 0.54
LRCH3-202ENST00000414675 RIPOR2Q9Y4F9 1068 aa18.4■□□□□ 0.54
LRCH3-202ENST00000414675 RREB1Q92766 1687 aa18.4■□□□□ 0.54
LRCH3-202ENST00000414675 XRCC6P12956 609 aaKnown RBP eCLIP18.4■□□□□ 0.54
LRCH3-202ENST00000414675 ME3Q16798 604 aa18.4■□□□□ 0.54
LRCH3-202ENST00000414675 TSGA10IPQ3SY00 556 aa18.4■□□□□ 0.54
LRCH3-202ENST00000414675 SPEF2Q9C093 1822 aa18.4■□□□□ 0.54
LRCH3-202ENST00000414675 SCARF1Q14162 830 aa18.39■□□□□ 0.54
LRCH3-202ENST00000414675 GAS2L3Q86XJ1 694 aa18.39■□□□□ 0.54
LRCH3-202ENST00000414675 HMG20BQ9P0W2 317 aa18.39■□□□□ 0.54
LRCH3-202ENST00000414675 TPCN1Q9ULQ1 816 aa18.39■□□□□ 0.54
LRCH3-202ENST00000414675 TCHHQ07283 1943 aa18.39■□□□□ 0.53
LRCH3-202ENST00000414675 PSMA5P28066 241 aa18.39■□□□□ 0.53
LRCH3-202ENST00000414675 BLOC1S2Q6QNY1 142 aa18.39■□□□□ 0.53
LRCH3-202ENST00000414675 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.39■□□□□ 0.53
LRCH3-202ENST00000414675 AKAP2Q9Y2D5 859 aa18.39■□□□□ 0.53
LRCH3-202ENST00000414675 RPS6KB1P23443 525 aa18.38■□□□□ 0.53
LRCH3-202ENST00000414675 ZMYM1Q5SVZ6 1142 aa18.38■□□□□ 0.53
LRCH3-202ENST00000414675 NECAB1Q8N987 351 aa18.38■□□□□ 0.53
LRCH3-202ENST00000414675 ANKRD18BA2A2Z9 1011 aa18.38■□□□□ 0.53
LRCH3-202ENST00000414675 PDE8AO60658 829 aa18.38■□□□□ 0.53
LRCH3-202ENST00000414675 LDHAL6AQ6ZMR3 332 aa18.38■□□□□ 0.53
LRCH3-202ENST00000414675 GPT2Q8TD30 523 aa18.38■□□□□ 0.53
LRCH3-202ENST00000414675 ZSCAN31Q96LW9 406 aaPredicted RBP18.38■□□□□ 0.53
LRCH3-202ENST00000414675 CICQ96RK0 1608 aaPredicted RBP18.37■□□□□ 0.53
LRCH3-202ENST00000414675 CYP21A2P08686 494 aa18.37■□□□□ 0.53
LRCH3-202ENST00000414675 FKBP4Q02790 459 aaKnown RBP eCLIP18.37■□□□□ 0.53
LRCH3-202ENST00000414675 FAM98CQ17RN3 349 aaKnown RBP18.37■□□□□ 0.53
LRCH3-202ENST00000414675 METTL24Q5JXM2 366 aa18.37■□□□□ 0.53
LRCH3-202ENST00000414675 TTC39AQ5SRH9 613 aa18.37■□□□□ 0.53
LRCH3-202ENST00000414675 SUSD4Q5VX71 490 aa18.37■□□□□ 0.53
LRCH3-202ENST00000414675 SH2B1Q9NRF2 756 aaPredicted RBP18.37■□□□□ 0.53
LRCH3-202ENST00000414675 HELLSQ9NRZ9 838 aa18.37■□□□□ 0.53
LRCH3-202ENST00000414675 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.37■□□□□ 0.53
LRCH3-202ENST00000414675 U3KPZ7 1027 aaPredicted RBP18.37■□□□□ 0.53
LRCH3-202ENST00000414675 WDR33Q9C0J8 1336 aaKnown RBP18.37■□□□□ 0.53
LRCH3-202ENST00000414675 TOB2Q14106 344 aaPredicted RBP18.37■□□□□ 0.53
LRCH3-202ENST00000414675 FOXD4L6Q3SYB3 417 aaPredicted RBP18.37■□□□□ 0.53
LRCH3-202ENST00000414675 CCDC158Q5M9N0 1113 aa18.37■□□□□ 0.53
LRCH3-202ENST00000414675 GORABQ5T7V8 394 aa18.37■□□□□ 0.53
LRCH3-202ENST00000414675 FOXD4L3Q6VB84 417 aaPredicted RBP18.37■□□□□ 0.53
LRCH3-202ENST00000414675 SMC3Q9UQE7 1217 aa18.37■□□□□ 0.53
LRCH3-202ENST00000414675 AKAP11Q9UKA4 1901 aa18.36■□□□□ 0.53
LRCH3-202ENST00000414675 MAST3O60307 1309 aa18.36■□□□□ 0.53
LRCH3-202ENST00000414675 FAM177BA6PVY3 158 aa18.36■□□□□ 0.53
LRCH3-202ENST00000414675 RNF113AO15541 343 aaKnown RBP18.36■□□□□ 0.53
LRCH3-202ENST00000414675 CAMTA2O94983 1202 aa18.36■□□□□ 0.53
LRCH3-202ENST00000414675 SYT1P21579 422 aa18.36■□□□□ 0.53
LRCH3-202ENST00000414675 ATP2B3Q16720 1220 aa18.36■□□□□ 0.53
LRCH3-202ENST00000414675 PI16Q6UXB8 463 aa18.36■□□□□ 0.53
LRCH3-202ENST00000414675 VGLL2Q8N8G2 317 aa18.36■□□□□ 0.53
LRCH3-202ENST00000414675 PANK2Q9BZ23 570 aa18.36■□□□□ 0.53
LRCH3-202ENST00000414675 LAMA4Q16363 1823 aa18.36■□□□□ 0.53
LRCH3-202ENST00000414675 CNNM1Q9NRU3 951 aa18.35■□□□□ 0.53
LRCH3-202ENST00000414675 NSFL1CQ9UNZ2 370 aaKnown RBP18.35■□□□□ 0.53
LRCH3-202ENST00000414675 A0A0G2JLW4 131 aa18.35■□□□□ 0.53
LRCH3-202ENST00000414675 M0R2C6 588 aa18.35■□□□□ 0.53
LRCH3-202ENST00000414675 HCLS1P14317 486 aaPredicted RBP18.35■□□□□ 0.53
LRCH3-202ENST00000414675 NCLP19338 710 aaKnown RBP18.35■□□□□ 0.53
LRCH3-202ENST00000414675 GJB2P29033 226 aa18.35■□□□□ 0.53
LRCH3-202ENST00000414675 STOX1Q6ZVD7 989 aa18.35■□□□□ 0.53
LRCH3-202ENST00000414675 BCL9LQ86UU0 1499 aa18.35■□□□□ 0.53
LRCH3-202ENST00000414675 ZAP70P43403 619 aa18.34■□□□□ 0.53
LRCH3-202ENST00000414675 CAVIN1Q6NZI2 390 aaKnown RBP18.34■□□□□ 0.53
LRCH3-202ENST00000414675 C8orf37Q96NL8 207 aa18.34■□□□□ 0.53
LRCH3-202ENST00000414675 ALDH8A1Q9H2A2 487 aaPredicted RBP18.34■□□□□ 0.53
LRCH3-202ENST00000414675 COL5A3P25940 1745 aaPredicted RBP18.34■□□□□ 0.53
LRCH3-202ENST00000414675 LRP5O75197 1615 aa18.34■□□□□ 0.53
LRCH3-202ENST00000414675 OSBP2Q969R2 916 aa18.34■□□□□ 0.53
LRCH3-202ENST00000414675 DDX60Q8IY21 1712 aaKnown RBP18.33■□□□□ 0.53
LRCH3-202ENST00000414675 STX6O43752 255 aa18.33■□□□□ 0.53
LRCH3-202ENST00000414675 KRT32Q14532 448 aa18.33■□□□□ 0.53
LRCH3-202ENST00000414675 TICAM2Q86XR7 235 aa18.33■□□□□ 0.53
LRCH3-202ENST00000414675 NEK1Q96PY6 1258 aa18.33■□□□□ 0.53
LRCH3-202ENST00000414675 GRPEL1Q9HAV7 217 aa18.33■□□□□ 0.53
LRCH3-202ENST00000414675 RBM27Q9P2N5 1060 aaKnown RBP18.33■□□□□ 0.53
LRCH3-202ENST00000414675 MYH7P12883 1935 aa18.33■□□□□ 0.52
LRCH3-202ENST00000414675 ZSCAN22P10073 491 aaPredicted RBP18.33■□□□□ 0.52
LRCH3-202ENST00000414675 HSPD1P10809 573 aaKnown RBP18.33■□□□□ 0.52
LRCH3-202ENST00000414675 DSCC1Q9BVC3 393 aa18.33■□□□□ 0.52
LRCH3-202ENST00000414675 GDPD2Q9HCC8 539 aa18.33■□□□□ 0.52
LRCH3-202ENST00000414675 MYO5AQ9Y4I1 1855 aaKnown RBP18.32■□□□□ 0.52
LRCH3-202ENST00000414675 MCAMP43121 646 aa18.32■□□□□ 0.52
LRCH3-202ENST00000414675 MRE11P49959 708 aa18.32■□□□□ 0.52
LRCH3-202ENST00000414675 PTF1AQ7RTS3 328 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms