RNA–Protein interactions for RNA: ENST00000414543.5

TRIM27-203, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 1,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-203ENST00000414543 XAGE2Q96GT9 111 aa12.46□□□□□ -0.41
TRIM27-203ENST00000414543 DNAJC2Q99543 621 aaKnown RBP12.46□□□□□ -0.41
TRIM27-203ENST00000414543 HAUS7Q99871 368 aa12.46□□□□□ -0.41
TRIM27-203ENST00000414543 FSD1Q9BTV5 496 aa12.46□□□□□ -0.41
TRIM27-203ENST00000414543 ABCC12Q96J65 1359 aa12.46□□□□□ -0.42
TRIM27-203ENST00000414543 IFIT1P09914 478 aaKnown RBP12.46□□□□□ -0.42
TRIM27-203ENST00000414543 BECN1Q14457 450 aa12.46□□□□□ -0.42
TRIM27-203ENST00000414543 TTC39AQ5SRH9 613 aa12.46□□□□□ -0.42
TRIM27-203ENST00000414543 FLAD1Q8NFF5 587 aa12.46□□□□□ -0.42
TRIM27-203ENST00000414543 ANO2Q9NQ90 1003 aa12.46□□□□□ -0.42
TRIM27-203ENST00000414543 TNS1Q9HBL0 1735 aaKnown RBP12.45□□□□□ -0.42
TRIM27-203ENST00000414543 MSH5O43196 834 aa12.45□□□□□ -0.42
TRIM27-203ENST00000414543 CWC27Q6UX04 472 aaKnown RBP12.45□□□□□ -0.42
TRIM27-203ENST00000414543 C3orf67Q6ZVT6 689 aa12.45□□□□□ -0.42
TRIM27-203ENST00000414543 VGLL2Q8N8G2 317 aa12.45□□□□□ -0.42
TRIM27-203ENST00000414543 CNBD1Q8NA66 436 aa12.45□□□□□ -0.42
TRIM27-203ENST00000414543 AKT1S1Q96B36 256 aa12.45□□□□□ -0.42
TRIM27-203ENST00000414543 LRP5O75197 1615 aa12.45□□□□□ -0.42
TRIM27-203ENST00000414543 SGSM2O43147 1006 aa12.44□□□□□ -0.42
TRIM27-203ENST00000414543 ADORA1P30542 326 aa12.44□□□□□ -0.42
TRIM27-203ENST00000414543 PUM3Q15397 648 aaKnown RBP12.44□□□□□ -0.42
TRIM27-203ENST00000414543 ZNF827Q17R98 1081 aa12.44□□□□□ -0.42
TRIM27-203ENST00000414543 KIAA1211Q6ZU35 1233 aa12.44□□□□□ -0.42
TRIM27-203ENST00000414543 CCDC24Q8N4L8 307 aa12.44□□□□□ -0.42
TRIM27-203ENST00000414543 HELBQ8NG08 1087 aaPredicted RBP12.44□□□□□ -0.42
TRIM27-203ENST00000414543 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.44□□□□□ -0.42
TRIM27-203ENST00000414543 LPIN2Q92539 896 aa12.44□□□□□ -0.42
TRIM27-203ENST00000414543 EPB41L2O43491 1005 aaKnown RBP12.44□□□□□ -0.42
TRIM27-203ENST00000414543 SERPINB2P05120 415 aa12.44□□□□□ -0.42
TRIM27-203ENST00000414543 SLC5A1P13866 664 aa12.44□□□□□ -0.42
TRIM27-203ENST00000414543 MCCP23508 829 aa12.44□□□□□ -0.42
TRIM27-203ENST00000414543 TM4SF1P30408 202 aa12.44□□□□□ -0.42
TRIM27-203ENST00000414543 ERICH6Q7L0X2 663 aa12.44□□□□□ -0.42
TRIM27-203ENST00000414543 PAG1Q9NWQ8 432 aa12.44□□□□□ -0.42
TRIM27-203ENST00000414543 SPEF2Q9C093 1822 aa12.43□□□□□ -0.42
TRIM27-203ENST00000414543 RGPD3A6NKT7 1758 aaPredicted RBP12.43□□□□□ -0.42
TRIM27-203ENST00000414543 RGPD4Q7Z3J3 1758 aa12.43□□□□□ -0.42
TRIM27-203ENST00000414543 CASZ1Q86V15 1759 aa12.43□□□□□ -0.42
TRIM27-203ENST00000414543 ST5P78524 1137 aa12.43□□□□□ -0.42
TRIM27-203ENST00000414543 DDX46Q7L014 1031 aaKnown RBP12.43□□□□□ -0.42
TRIM27-203ENST00000414543 EDC3Q96F86 508 aaKnown RBP12.43□□□□□ -0.42
TRIM27-203ENST00000414543 BSDC1Q9NW68 430 aaPredicted RBP12.43□□□□□ -0.42
TRIM27-203ENST00000414543 GOLIM4O00461 696 aa12.42□□□□□ -0.42
TRIM27-203ENST00000414543 TAF5LO75529 589 aa12.42□□□□□ -0.42
TRIM27-203ENST00000414543 FGFR2P21802 821 aa12.42□□□□□ -0.42
TRIM27-203ENST00000414543 CHRNDQ07001 517 aa12.42□□□□□ -0.42
TRIM27-203ENST00000414543 SF3B2Q13435 895 aaKnown RBP12.42□□□□□ -0.42
TRIM27-203ENST00000414543 NLGN1Q8N2Q7 840 aa12.42□□□□□ -0.42
TRIM27-203ENST00000414543 KBTBD3Q8NAB2 608 aa12.42□□□□□ -0.42
TRIM27-203ENST00000414543 NDUFB9Q9Y6M9 179 aa12.42□□□□□ -0.42
TRIM27-203ENST00000414543 RPS8P62241 208 aaKnown RBP12.41□□□□□ -0.42
TRIM27-203ENST00000414543 NMIQ13287 307 aaPredicted RBP12.41□□□□□ -0.42
TRIM27-203ENST00000414543 PRR5LQ6MZQ0 368 aa12.41□□□□□ -0.42
TRIM27-203ENST00000414543 TICAM2Q86XR7 235 aa12.41□□□□□ -0.42
TRIM27-203ENST00000414543 COL23A1Q86Y22 540 aaPredicted RBP12.41□□□□□ -0.42
TRIM27-203ENST00000414543 KIF2CQ99661 725 aa12.41□□□□□ -0.42
TRIM27-203ENST00000414543 RFX7Q2KHR2 1363 aa12.41□□□□□ -0.42
TRIM27-203ENST00000414543 RAD50Q92878 1312 aa12.41□□□□□ -0.42
TRIM27-203ENST00000414543 UQCRFS1P1P0C7P4 283 aa12.41□□□□□ -0.42
TRIM27-203ENST00000414543 SLC4A3P48751 1232 aa12.41□□□□□ -0.42
TRIM27-203ENST00000414543 FKBP4Q02790 459 aaKnown RBP eCLIP12.41□□□□□ -0.42
TRIM27-203ENST00000414543 EN1Q05925 392 aaPredicted RBP12.41□□□□□ -0.42
TRIM27-203ENST00000414543 LRRFIP1Q32MZ4 808 aaKnown RBP12.41□□□□□ -0.42
TRIM27-203ENST00000414543 CELF1Q92879 486 aaKnown RBP12.41□□□□□ -0.42
TRIM27-203ENST00000414543 ZNF512BQ96KM6 892 aaPredicted RBP12.41□□□□□ -0.42
TRIM27-203ENST00000414543 IL25Q9H293 177 aa12.41□□□□□ -0.42
TRIM27-203ENST00000414543 EZH2Q15910 746 aaKnown RBP12.4□□□□□ -0.42
TRIM27-203ENST00000414543 CCDC102BQ68D86 513 aa12.4□□□□□ -0.42
TRIM27-203ENST00000414543 FAM227BQ96M60 508 aa12.4□□□□□ -0.42
TRIM27-203ENST00000414543 CAMKK2Q96RR4 588 aa12.4□□□□□ -0.42
TRIM27-203ENST00000414543 SNRKQ9NRH2 765 aa12.4□□□□□ -0.42
TRIM27-203ENST00000414543 POLRMTO00411 1230 aaKnown RBP12.39□□□□□ -0.43
TRIM27-203ENST00000414543 RABEP1Q15276 862 aa12.39□□□□□ -0.43
TRIM27-203ENST00000414543 HSCBQ8IWL3 235 aa12.39□□□□□ -0.43
TRIM27-203ENST00000414543 RPGRQ92834 1020 aaKnown RBP12.39□□□□□ -0.43
TRIM27-203ENST00000414543 TBC1D2Q9BYX2 928 aa12.39□□□□□ -0.43
TRIM27-203ENST00000414543 MINPP1Q9UNW1 487 aa12.39□□□□□ -0.43
TRIM27-203ENST00000414543 TAF1P21675 1872 aa12.39□□□□□ -0.43
TRIM27-203ENST00000414543 A0A0D9SFI3 127 aa12.39□□□□□ -0.43
TRIM27-203ENST00000414543 ZAP70P43403 619 aa12.39□□□□□ -0.43
TRIM27-203ENST00000414543 BAG6P46379 1132 aa12.39□□□□□ -0.43
TRIM27-203ENST00000414543 DDR1Q08345 913 aa12.39□□□□□ -0.43
TRIM27-203ENST00000414543 UBE4AQ14139 1066 aa12.39□□□□□ -0.43
TRIM27-203ENST00000414543 ANKRD2Q9GZV1 360 aa12.39□□□□□ -0.43
TRIM27-203ENST00000414543 LSG1Q9H089 658 aaKnown RBP12.39□□□□□ -0.43
TRIM27-203ENST00000414543 STK32BQ9NY57 414 aa12.39□□□□□ -0.43
TRIM27-203ENST00000414543 PNPLA7Q6ZV29 1317 aa12.38□□□□□ -0.43
TRIM27-203ENST00000414543 ARAP2Q8WZ64 1704 aa12.38□□□□□ -0.43
TRIM27-203ENST00000414543 COL4A1P02462 1669 aa12.38□□□□□ -0.43
TRIM27-203ENST00000414543 TNRC6CQ9HCJ0 1690 aaKnown RBP12.38□□□□□ -0.43
TRIM27-203ENST00000414543 SNAP23O00161 211 aa12.38□□□□□ -0.43
TRIM27-203ENST00000414543 ARID4AP29374 1257 aaPredicted RBP12.38□□□□□ -0.43
TRIM27-203ENST00000414543 MCAMP43121 646 aa12.38□□□□□ -0.43
TRIM27-203ENST00000414543 PHKA1P46020 1223 aa12.38□□□□□ -0.43
TRIM27-203ENST00000414543 ANAPC15P60006 121 aa12.38□□□□□ -0.43
TRIM27-203ENST00000414543 SCARF1Q14162 830 aa12.38□□□□□ -0.43
TRIM27-203ENST00000414543 TTF1Q15361 905 aaPredicted RBP12.38□□□□□ -0.43
TRIM27-203ENST00000414543 SNX21Q969T3 373 aa12.38□□□□□ -0.43
TRIM27-203ENST00000414543 ANTXR1Q9H6X2 564 aa12.38□□□□□ -0.43
TRIM27-203ENST00000414543 EP400Q96L91 3159 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms