RNA–Protein interactions for RNA: ENST00000413879.1

AC004987.3-201, humanhuman

BASIC

Gene AC004987.3, Length 771 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004987.3-201ENST00000413879 IER5Q5VY09 327 aa6.49□□□□□ -1.37
AC004987.3-201ENST00000413879 GDF6Q6KF10 455 aaPredicted RBP6.49□□□□□ -1.37
AC004987.3-201ENST00000413879 USP17L2Q6R6M4 530 aa6.49□□□□□ -1.37
AC004987.3-201ENST00000413879 USP17L1Q7RTZ2 530 aa6.49□□□□□ -1.37
AC004987.3-201ENST00000413879 STAG2Q8N3U4 1231 aa6.49□□□□□ -1.37
AC004987.3-201ENST00000413879 GAS2L2Q8NHY3 880 aa6.49□□□□□ -1.37
AC004987.3-201ENST00000413879 DCAF11Q8TEB1 546 aa6.49□□□□□ -1.37
AC004987.3-201ENST00000413879 KIAA1324LA8MWY0 1029 aaPredicted RBP6.48□□□□□ -1.37
AC004987.3-201ENST00000413879 RTN1Q16799 776 aa6.48□□□□□ -1.37
AC004987.3-201ENST00000413879 CCDC27Q2M243 656 aa6.48□□□□□ -1.37
AC004987.3-201ENST00000413879 INTS5Q6P9B9 1019 aaKnown RBP6.48□□□□□ -1.37
AC004987.3-201ENST00000413879 AGGF1Q8N302 714 aaeCLIP6.48□□□□□ -1.37
AC004987.3-201ENST00000413879 IL22RA1Q8N6P7 574 aa6.48□□□□□ -1.37
AC004987.3-201ENST00000413879 IFT43Q96FT9 208 aa6.48□□□□□ -1.37
AC004987.3-201ENST00000413879 MKRN1Q9UHC7 482 aaKnown RBP6.48□□□□□ -1.37
AC004987.3-201ENST00000413879 ATG7O95352 703 aa6.47□□□□□ -1.37
AC004987.3-201ENST00000413879 IDH3AP50213 366 aa6.47□□□□□ -1.37
AC004987.3-201ENST00000413879 GPLD1P80108 840 aa6.47□□□□□ -1.37
AC004987.3-201ENST00000413879 PLEKHM2Q8IWE5 1019 aa6.47□□□□□ -1.37
AC004987.3-201ENST00000413879 ZNF594Q96JF6 807 aaPredicted RBP6.47□□□□□ -1.37
AC004987.3-201ENST00000413879 HINFPQ9BQA5 517 aa6.47□□□□□ -1.37
AC004987.3-201ENST00000413879 DMGDHQ9UI17 866 aaKnown RBP6.47□□□□□ -1.37
AC004987.3-201ENST00000413879 J3QW42 95 aa6.46□□□□□ -1.38
AC004987.3-201ENST00000413879 DHX15O43143 795 aaKnown RBP6.46□□□□□ -1.38
AC004987.3-201ENST00000413879 WNT11O96014 354 aa6.46□□□□□ -1.38
AC004987.3-201ENST00000413879 INPP5BP32019 993 aa6.46□□□□□ -1.38
AC004987.3-201ENST00000413879 KANK4Q5T7N3 995 aaPredicted RBP6.46□□□□□ -1.38
AC004987.3-201ENST00000413879 LARP1Q6PKG0 1096 aaKnown RBP6.46□□□□□ -1.38
AC004987.3-201ENST00000413879 PLD4Q96BZ4 506 aa6.46□□□□□ -1.38
AC004987.3-201ENST00000413879 RBSNQ9H1K0 784 aa6.46□□□□□ -1.38
AC004987.3-201ENST00000413879 BCS1LQ9Y276 419 aa6.46□□□□□ -1.38
AC004987.3-201ENST00000413879 LOC102724428A0A0B4J2F2 783 aa6.45□□□□□ -1.38
AC004987.3-201ENST00000413879 CARNS1A5YM72 827 aa6.45□□□□□ -1.38
AC004987.3-201ENST00000413879 GHRHP01286 108 aa6.45□□□□□ -1.38
AC004987.3-201ENST00000413879 CANXP27824 592 aaKnown RBP6.45□□□□□ -1.38
AC004987.3-201ENST00000413879 SIK1P57059 783 aa6.45□□□□□ -1.38
AC004987.3-201ENST00000413879 MAP4K3Q8IVH8 894 aa6.45□□□□□ -1.38
AC004987.3-201ENST00000413879 UBL7Q96S82 380 aaPredicted RBP6.45□□□□□ -1.38
AC004987.3-201ENST00000413879 SRA1Q9HD15 236 aaKnown RBP6.45□□□□□ -1.38
AC004987.3-201ENST00000413879 ADAMTS4O75173 837 aa6.44□□□□□ -1.38
AC004987.3-201ENST00000413879 RASA1P20936 1047 aa6.44□□□□□ -1.38
AC004987.3-201ENST00000413879 GRNP28799 593 aaKnown RBP6.44□□□□□ -1.38
AC004987.3-201ENST00000413879 ARSDP51689 593 aa6.44□□□□□ -1.38
AC004987.3-201ENST00000413879 NRLP54845 237 aa6.44□□□□□ -1.38
AC004987.3-201ENST00000413879 NFIAQ12857 509 aa6.44□□□□□ -1.38
AC004987.3-201ENST00000413879 SETDB1Q15047 1291 aa6.44□□□□□ -1.38
AC004987.3-201ENST00000413879 C11orf16Q9NQ32 467 aa6.44□□□□□ -1.38
AC004987.3-201ENST00000413879 KLK14Q9P0G3 267 aa6.44□□□□□ -1.38
AC004987.3-201ENST00000413879 USP35Q9P2H5 1018 aa6.44□□□□□ -1.38
AC004987.3-201ENST00000413879 NOVA2Q9UNW9 492 aaKnown RBP6.44□□□□□ -1.38
AC004987.3-201ENST00000413879 USP17L15C9J2P7 530 aa6.43□□□□□ -1.38
AC004987.3-201ENST00000413879 USP17L10C9JJH3 530 aa6.43□□□□□ -1.38
AC004987.3-201ENST00000413879 USP17L13C9JLJ4 530 aa6.43□□□□□ -1.38
AC004987.3-201ENST00000413879 USP17L12C9JPN9 530 aa6.43□□□□□ -1.38
AC004987.3-201ENST00000413879 USP17L11C9JVI0 530 aa6.43□□□□□ -1.38
AC004987.3-201ENST00000413879 USP17L21D6R901 530 aa6.43□□□□□ -1.38
AC004987.3-201ENST00000413879 USP17L18D6R9N7 530 aa6.43□□□□□ -1.38
AC004987.3-201ENST00000413879 USP17L22D6RA61 530 aa6.43□□□□□ -1.38
AC004987.3-201ENST00000413879 USP17L17D6RBQ6 530 aa6.43□□□□□ -1.38
AC004987.3-201ENST00000413879 USP17L19D6RCP7 530 aa6.43□□□□□ -1.38
AC004987.3-201ENST00000413879 USP17L20D6RJB6 530 aa6.43□□□□□ -1.38
AC004987.3-201ENST00000413879 USP17L24Q0WX57 530 aa6.43□□□□□ -1.38
AC004987.3-201ENST00000413879 ZDHHC13Q8IUH4 622 aa6.43□□□□□ -1.38
AC004987.3-201ENST00000413879 SIX5Q8N196 739 aa6.43□□□□□ -1.38
AC004987.3-201ENST00000413879 CEP41Q9BYV8 373 aa6.43□□□□□ -1.38
AC004987.3-201ENST00000413879 TLR7Q9NYK1 1049 aaKnown RBP6.43□□□□□ -1.38
AC004987.3-201ENST00000413879 ARID1BQ8NFD5 2236 aaPredicted RBP6.42□□□□□ -1.38
AC004987.3-201ENST00000413879 PSAPP07602 524 aa6.42□□□□□ -1.38
AC004987.3-201ENST00000413879 SEC13P55735 322 aa6.42□□□□□ -1.38
AC004987.3-201ENST00000413879 ELOAQ14241 798 aaKnown RBP6.42□□□□□ -1.38
AC004987.3-201ENST00000413879 B4GALNT3Q6L9W6 998 aa6.42□□□□□ -1.38
AC004987.3-201ENST00000413879 Q6ZS46 218 aa6.42□□□□□ -1.38
AC004987.3-201ENST00000413879 SND1Q7KZF4 910 aaKnown RBP eCLIP6.42□□□□□ -1.38
AC004987.3-201ENST00000413879 ZNF428Q96B54 188 aa6.42□□□□□ -1.38
AC004987.3-201ENST00000413879 TMEM88BA6NKF7 163 aa6.41□□□□□ -1.38
AC004987.3-201ENST00000413879 FAM196BA6NMK8 535 aa6.41□□□□□ -1.38
AC004987.3-201ENST00000413879 MICAL2O94851 1124 aa6.41□□□□□ -1.38
AC004987.3-201ENST00000413879 ERCC3P19447 782 aa6.41□□□□□ -1.38
AC004987.3-201ENST00000413879 SPINK2P20155 84 aa6.41□□□□□ -1.38
AC004987.3-201ENST00000413879 DGKZQ13574 1117 aa6.41□□□□□ -1.38
AC004987.3-201ENST00000413879 CRTC2Q53ET0 693 aaPredicted RBP6.41□□□□□ -1.38
AC004987.3-201ENST00000413879 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.41□□□□□ -1.38
AC004987.3-201ENST00000413879 TRIM42Q8IWZ5 723 aa6.41□□□□□ -1.38
AC004987.3-201ENST00000413879 ARMC10Q8N2F6 343 aa6.41□□□□□ -1.38
AC004987.3-201ENST00000413879 FAM200AQ8TCP9 573 aa6.41□□□□□ -1.38
AC004987.3-201ENST00000413879 STK32AQ8WU08 396 aa6.41□□□□□ -1.38
AC004987.3-201ENST00000413879 UTP4Q969X6 686 aaKnown RBP6.41□□□□□ -1.38
AC004987.3-201ENST00000413879 MUC3BQ9H195 1237 aa6.41□□□□□ -1.38
AC004987.3-201ENST00000413879 PPME1Q9Y570 386 aa6.41□□□□□ -1.38
AC004987.3-201ENST00000413879 HMX2A2RU54 273 aa6.4□□□□□ -1.38
AC004987.3-201ENST00000413879 LGR5O75473 907 aa6.4□□□□□ -1.38
AC004987.3-201ENST00000413879 TMEM164Q5U3C3 297 aa6.4□□□□□ -1.38
AC004987.3-201ENST00000413879 RNF43Q68DV7 783 aa6.4□□□□□ -1.38
AC004987.3-201ENST00000413879 DTX1Q86Y01 620 aa6.4□□□□□ -1.38
AC004987.3-201ENST00000413879 CMTR1Q8N1G2 835 aaKnown RBP6.4□□□□□ -1.38
AC004987.3-201ENST00000413879 NSUN5Q96P11 429 aaKnown RBP6.4□□□□□ -1.38
AC004987.3-201ENST00000413879 DBNDD2Q9BQY9 259 aa6.4□□□□□ -1.38
AC004987.3-201ENST00000413879 C7orf69Q9H7B7 122 aa6.4□□□□□ -1.38
AC004987.3-201ENST00000413879 ZMIZ1Q9ULJ6 1067 aa6.4□□□□□ -1.38
AC004987.3-201ENST00000413879 USP20Q9Y2K6 914 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms