RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 SMAD7O15105 426 aaKnown RBP7.28□□□□□ -1.24
CBX1P3-201ENST00000413296 GOLGA6DP0CG33 693 aa7.28□□□□□ -1.24
CBX1P3-201ENST00000413296 VARSP26640 1264 aaKnown RBP7.28□□□□□ -1.24
CBX1P3-201ENST00000413296 SOX5P35711 763 aa7.28□□□□□ -1.24
CBX1P3-201ENST00000413296 GUCY2FP51841 1108 aa7.28□□□□□ -1.24
CBX1P3-201ENST00000413296 NEK2P51955 445 aa7.28□□□□□ -1.24
CBX1P3-201ENST00000413296 FAM193AP78312 1265 aa7.28□□□□□ -1.24
CBX1P3-201ENST00000413296 MLC1Q15049 377 aa7.28□□□□□ -1.24
CBX1P3-201ENST00000413296 DDR2Q16832 855 aa7.28□□□□□ -1.24
CBX1P3-201ENST00000413296 TM4SF20Q53R12 229 aa7.28□□□□□ -1.24
CBX1P3-201ENST00000413296 COX20Q5RI15 118 aa7.28□□□□□ -1.24
CBX1P3-201ENST00000413296 ATCAYQ86WG3 371 aa7.28□□□□□ -1.24
CBX1P3-201ENST00000413296 DZIP3Q86Y13 1208 aaKnown RBP7.28□□□□□ -1.24
CBX1P3-201ENST00000413296 MFSD3Q96ES6 412 aa7.28□□□□□ -1.24
CBX1P3-201ENST00000413296 OSBPL7Q9BZF2 842 aa7.28□□□□□ -1.24
CBX1P3-201ENST00000413296 NBPF3Q9H094 633 aa7.28□□□□□ -1.24
CBX1P3-201ENST00000413296 IFT122Q9HBG6 1241 aa7.28□□□□□ -1.24
CBX1P3-201ENST00000413296 ST7Q9NRC1 585 aa7.28□□□□□ -1.24
CBX1P3-201ENST00000413296 GOLGA6AQ9NYA3 693 aa7.28□□□□□ -1.24
CBX1P3-201ENST00000413296 FAM8A1Q9UBU6 413 aa7.28□□□□□ -1.24
CBX1P3-201ENST00000413296 SCRIBQ14160 1630 aa7.27□□□□□ -1.25
CBX1P3-201ENST00000413296 TMEM238LA0A1B0GVL6 79 aa7.27□□□□□ -1.25
CBX1P3-201ENST00000413296 TCEA3O75764 348 aa7.27□□□□□ -1.25
CBX1P3-201ENST00000413296 C21orf62-AS1Q17RA5 79 aa7.27□□□□□ -1.25
CBX1P3-201ENST00000413296 Q3C1V9 767 aa7.27□□□□□ -1.25
CBX1P3-201ENST00000413296 SWT1Q5T5J6 900 aaKnown RBP7.27□□□□□ -1.25
CBX1P3-201ENST00000413296 WWC2Q6AWC2 1192 aa7.27□□□□□ -1.25
CBX1P3-201ENST00000413296 ERAP2Q6P179 960 aa7.27□□□□□ -1.25
CBX1P3-201ENST00000413296 CPXCR1Q8N123 301 aa7.27□□□□□ -1.25
CBX1P3-201ENST00000413296 JMYQ8N9B5 988 aa7.27□□□□□ -1.25
CBX1P3-201ENST00000413296 CHMP7Q8WUX9 453 aaPredicted RBP7.27□□□□□ -1.25
CBX1P3-201ENST00000413296 EAF1Q96JC9 268 aaPredicted RBP7.27□□□□□ -1.25
CBX1P3-201ENST00000413296 ARHGAP9Q9BRR9 750 aa7.27□□□□□ -1.25
CBX1P3-201ENST00000413296 RSRP1Q9BUV0 290 aa7.27□□□□□ -1.25
CBX1P3-201ENST00000413296 SRRTQ9BXP5 876 aaKnown RBP7.27□□□□□ -1.25
CBX1P3-201ENST00000413296 NOL7Q9UMY1 257 aaKnown RBP7.27□□□□□ -1.25
CBX1P3-201ENST00000413296 PTCH2Q9Y6C5 1203 aa7.27□□□□□ -1.25
CBX1P3-201ENST00000413296 ZCCHC6Q5VYS8 1495 aaKnown RBP7.26□□□□□ -1.25
CBX1P3-201ENST00000413296 ZBTB39O15060 712 aa7.26□□□□□ -1.25
CBX1P3-201ENST00000413296 RNASEH2AO75792 299 aaKnown RBP7.26□□□□□ -1.25
CBX1P3-201ENST00000413296 USP17L7P0C7H9 530 aa7.26□□□□□ -1.25
CBX1P3-201ENST00000413296 PPM1FP49593 454 aaPredicted RBP7.26□□□□□ -1.25
CBX1P3-201ENST00000413296 DNM1Q05193 864 aaKnown RBP7.26□□□□□ -1.25
CBX1P3-201ENST00000413296 FAM83BQ5T0W9 1011 aa7.26□□□□□ -1.25
CBX1P3-201ENST00000413296 NBPF14Q5TI25 921 aa7.26□□□□□ -1.25
CBX1P3-201ENST00000413296 ANO1Q5XXA6 986 aa7.26□□□□□ -1.25
CBX1P3-201ENST00000413296 ZBTB33Q86T24 672 aa7.26□□□□□ -1.25
CBX1P3-201ENST00000413296 TCEAL8Q8IYN2 117 aa7.26□□□□□ -1.25
CBX1P3-201ENST00000413296 NGDNQ8NEJ9 315 aaKnown RBP7.26□□□□□ -1.25
CBX1P3-201ENST00000413296 ATL2Q8NHH9 583 aa7.26□□□□□ -1.25
CBX1P3-201ENST00000413296 ASPSCR1Q9BZE9 553 aa7.26□□□□□ -1.25
CBX1P3-201ENST00000413296 GTF2A1LQ9UNN4 478 aa7.26□□□□□ -1.25
CBX1P3-201ENST00000413296 DAAM1Q9Y4D1 1078 aa7.26□□□□□ -1.25
CBX1P3-201ENST00000413296 E2F8A0AVK6 867 aa7.25□□□□□ -1.25
CBX1P3-201ENST00000413296 KATNA1O75449 491 aa7.25□□□□□ -1.25
CBX1P3-201ENST00000413296 TRIM37O94972 964 aa7.25□□□□□ -1.25
CBX1P3-201ENST00000413296 F2P00734 622 aa7.25□□□□□ -1.25
CBX1P3-201ENST00000413296 PURAQ00577 322 aaKnown RBP7.25□□□□□ -1.25
CBX1P3-201ENST00000413296 PWP1Q13610 501 aa7.25□□□□□ -1.25
CBX1P3-201ENST00000413296 SLC4A8Q2Y0W8 1093 aa7.25□□□□□ -1.25
CBX1P3-201ENST00000413296 GFOD2Q3B7J2 385 aa7.25□□□□□ -1.25
CBX1P3-201ENST00000413296 MTERF2Q49AM1 385 aa7.25□□□□□ -1.25
CBX1P3-201ENST00000413296 CC2D1AQ6P1N0 951 aaPredicted RBP7.25□□□□□ -1.25
CBX1P3-201ENST00000413296 DGKHQ86XP1 1220 aa7.25□□□□□ -1.25
CBX1P3-201ENST00000413296 RELL1Q8IUW5 271 aa7.25□□□□□ -1.25
CBX1P3-201ENST00000413296 NIM1KQ8IY84 436 aa7.25□□□□□ -1.25
CBX1P3-201ENST00000413296 ANKRD42Q8N9B4 389 aa7.25□□□□□ -1.25
CBX1P3-201ENST00000413296 EDEM1Q92611 657 aa7.25□□□□□ -1.25
CBX1P3-201ENST00000413296 NINJ1Q92982 152 aa7.25□□□□□ -1.25
CBX1P3-201ENST00000413296 CDH19Q9H159 772 aa7.25□□□□□ -1.25
CBX1P3-201ENST00000413296 LUZP4Q9P127 313 aa7.25□□□□□ -1.25
CBX1P3-201ENST00000413296 MAPK8IP1Q9UQF2 711 aa7.25□□□□□ -1.25
CBX1P3-201ENST00000413296 KDM2BQ8NHM5 1336 aa7.25□□□□□ -1.25
CBX1P3-201ENST00000413296 CLSPNQ9HAW4 1339 aa7.25□□□□□ -1.25
CBX1P3-201ENST00000413296 PRRT4C9JH25 899 aa7.24□□□□□ -1.25
CBX1P3-201ENST00000413296 CPNE3O75131 537 aaKnown RBP7.24□□□□□ -1.25
CBX1P3-201ENST00000413296 HIP1RO75146 1068 aa7.24□□□□□ -1.25
CBX1P3-201ENST00000413296 PDGFAP04085 211 aa7.24□□□□□ -1.25
CBX1P3-201ENST00000413296 CFHP08603 1231 aa7.24□□□□□ -1.25
CBX1P3-201ENST00000413296 NBPF7P0C2Y1 421 aaPredicted RBP7.24□□□□□ -1.25
CBX1P3-201ENST00000413296 PLCG2P16885 1265 aa7.24□□□□□ -1.25
CBX1P3-201ENST00000413296 EIF4A3P38919 411 aaKnown RBP7.24□□□□□ -1.25
CBX1P3-201ENST00000413296 CLCN6P51797 869 aa7.24□□□□□ -1.25
CBX1P3-201ENST00000413296 TERF1P54274 439 aa7.24□□□□□ -1.25
CBX1P3-201ENST00000413296 PIN1Q13526 163 aaPredicted RBP7.24□□□□□ -1.25
CBX1P3-201ENST00000413296 PTPRNQ16849 979 aa7.24□□□□□ -1.25
CBX1P3-201ENST00000413296 FAM102BQ5T8I3 360 aa7.24□□□□□ -1.25
CBX1P3-201ENST00000413296 USPL1Q5W0Q7 1092 aa7.24□□□□□ -1.25
CBX1P3-201ENST00000413296 NXNQ6DKJ4 435 aa7.24□□□□□ -1.25
CBX1P3-201ENST00000413296 KANK3Q6NY19 840 aa7.24□□□□□ -1.25
CBX1P3-201ENST00000413296 STK11IPQ8N1F8 1099 aa7.24□□□□□ -1.25
CBX1P3-201ENST00000413296 UBR7Q8N806 425 aa7.24□□□□□ -1.25
CBX1P3-201ENST00000413296 ENAHQ8N8S7 591 aaPredicted RBP7.24□□□□□ -1.25
CBX1P3-201ENST00000413296 SNRNP27Q8WVK2 155 aaKnown RBP7.24□□□□□ -1.25
CBX1P3-201ENST00000413296 MUC3BQ9H195 1237 aa7.24□□□□□ -1.25
CBX1P3-201ENST00000413296 NGRNQ9NPE2 291 aaKnown RBP7.24□□□□□ -1.25
CBX1P3-201ENST00000413296 FBXO2Q9UK22 296 aaPredicted RBP7.24□□□□□ -1.25
CBX1P3-201ENST00000413296 ASAP1Q9ULH1 1129 aa7.24□□□□□ -1.25
CBX1P3-201ENST00000413296 NOB1Q9ULX3 412 aaKnown RBP7.24□□□□□ -1.25
CBX1P3-201ENST00000413296 CTDP1Q9Y5B0 961 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms