RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 SOGA3Q5TF21 947 aa6.05□□□□□ -1.44
HERC4-205ENST00000412272 ANKRD13AQ8IZ07 590 aa6.05□□□□□ -1.44
HERC4-205ENST00000412272 TMEM87AQ8NBN3 555 aa6.05□□□□□ -1.44
HERC4-205ENST00000412272 FAM81AQ8TBF8 368 aa6.05□□□□□ -1.44
HERC4-205ENST00000412272 RTF1Q92541 710 aaKnown RBP6.05□□□□□ -1.44
HERC4-205ENST00000412272 ZKSCAN4Q969J2 545 aaPredicted RBP6.05□□□□□ -1.44
HERC4-205ENST00000412272 PHF23Q9BUL5 403 aaPredicted RBP6.05□□□□□ -1.44
HERC4-205ENST00000412272 ZCCHC17Q9NP64 241 aaKnown RBP6.05□□□□□ -1.44
HERC4-205ENST00000412272 PCDHB15Q9Y5E8 787 aa6.05□□□□□ -1.44
HERC4-205ENST00000412272 ABCA10Q8WWZ4 1543 aa6.05□□□□□ -1.44
HERC4-205ENST00000412272 ANKRD65E5RJM6 399 aa6.05□□□□□ -1.44
HERC4-205ENST00000412272 SKAP2O75563 359 aaPredicted RBP6.05□□□□□ -1.44
HERC4-205ENST00000412272 KRT38O76015 456 aa6.05□□□□□ -1.44
HERC4-205ENST00000412272 TGFB3P10600 412 aa6.05□□□□□ -1.44
HERC4-205ENST00000412272 RLBP1P12271 317 aa6.05□□□□□ -1.44
HERC4-205ENST00000412272 NSUN2Q08J23 767 aaKnown RBP eCLIP6.05□□□□□ -1.44
HERC4-205ENST00000412272 TMCO4Q5TGY1 634 aa6.05□□□□□ -1.44
HERC4-205ENST00000412272 ISM2Q6H9L7 571 aa6.05□□□□□ -1.44
HERC4-205ENST00000412272 MYOCDQ8IZQ8 938 aa6.05□□□□□ -1.44
HERC4-205ENST00000412272 CCDC112Q8NEF3 446 aa6.05□□□□□ -1.44
HERC4-205ENST00000412272 GPCPD1Q9NPB8 672 aa6.05□□□□□ -1.44
HERC4-205ENST00000412272 ZNF215Q9UL58 517 aaPredicted RBP6.05□□□□□ -1.44
HERC4-205ENST00000412272 ADAMTS8Q9UP79 889 aa6.05□□□□□ -1.44
HERC4-205ENST00000412272 SENP3-EIF4A1A0A087X0R7 540 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 ABL1P00519 1130 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 MYCLP1P12525 358 aaPredicted RBP6.04□□□□□ -1.44
HERC4-205ENST00000412272 KCNA2P16389 499 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 LMNB1P20700 586 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 NF2P35240 595 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 FXNQ16595 210 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 BMP2KLQ5H9B9 411 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 WDR63Q8IWG1 891 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 AK7Q96M32 723 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 THUMPD2Q9BTF0 503 aaKnown RBP6.04□□□□□ -1.44
HERC4-205ENST00000412272 MAGEC2Q9UBF1 373 aaPredicted RBP6.04□□□□□ -1.44
HERC4-205ENST00000412272 SYNJ2O15056 1496 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 BOLA2-SMG1P6H3BVE0 249 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 EIF3FO00303 357 aaPredicted RBP6.04□□□□□ -1.44
HERC4-205ENST00000412272 CCDC175P0C221 793 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 CLCN6P51797 869 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 ARMC9Q7Z3E5 817 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 ANKRD13BQ86YJ7 626 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 OR8K1Q8NGG5 319 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 SYAP1Q96A49 352 aaPredicted RBP6.04□□□□□ -1.44
HERC4-205ENST00000412272 CCDC85AQ96PX6 553 aaPredicted RBP6.04□□□□□ -1.44
HERC4-205ENST00000412272 HOMER3Q9NSC5 361 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 CLIP2Q9UDT6 1046 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 MED14O60244 1454 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 KIF2AO00139 706 aaPredicted RBP6.04□□□□□ -1.44
HERC4-205ENST00000412272 HOXD10P28358 340 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 SCNN1BP51168 640 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 TCP11Q8WWU5 503 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 NACC2Q96BF6 587 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 TRIM11Q96F44 468 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 AK9Q5TCS8 1911 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 TUBGCP6Q96RT7 1819 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 CEP152O94986 1710 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 ABCA6Q8N139 1617 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 WDR62O43379 1518 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 KIAA1210Q9ULL0 1709 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 CFAP69A5D8W1 941 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 RPL13P26373 211 aaKnown RBP6.04□□□□□ -1.44
HERC4-205ENST00000412272 ARHGAP27Q6ZUM4 889 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 TRIML1Q8N9V2 468 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 HDAC7Q8WUI4 952 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 ADAM21Q9UKJ8 722 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 ODF2LQ9ULJ1 636 aa6.04□□□□□ -1.44
HERC4-205ENST00000412272 ZC3H13Q5T200 1668 aaKnown RBP6.03□□□□□ -1.44
HERC4-205ENST00000412272 SYCE3A1L190 88 aa6.03□□□□□ -1.44
HERC4-205ENST00000412272 ENPP1P22413 925 aa6.03□□□□□ -1.44
HERC4-205ENST00000412272 OAS2P29728 719 aaKnown RBP6.03□□□□□ -1.44
HERC4-205ENST00000412272 CA8P35219 290 aa6.03□□□□□ -1.44
HERC4-205ENST00000412272 INHBCP55103 352 aa6.03□□□□□ -1.44
HERC4-205ENST00000412272 SESN3P58005 492 aa6.03□□□□□ -1.44
HERC4-205ENST00000412272 RRP12Q5JTH9 1297 aaKnown RBP6.03□□□□□ -1.44
HERC4-205ENST00000412272 FBXW10Q5XX13 1052 aa6.03□□□□□ -1.44
HERC4-205ENST00000412272 LARP1BQ659C4 914 aaKnown RBP6.03□□□□□ -1.44
HERC4-205ENST00000412272 TLDC1Q6P9B6 456 aa6.03□□□□□ -1.44
HERC4-205ENST00000412272 PACS1Q6VY07 963 aa6.03□□□□□ -1.44
HERC4-205ENST00000412272 IL17RAQ96F46 866 aa6.03□□□□□ -1.44
HERC4-205ENST00000412272 ERO1AQ96HE7 468 aa6.03□□□□□ -1.44
HERC4-205ENST00000412272 SPATA32Q96LK8 384 aa6.03□□□□□ -1.44
HERC4-205ENST00000412272 CENPOQ9BU64 300 aa6.03□□□□□ -1.44
HERC4-205ENST00000412272 RGL1Q9NZL6 768 aa6.03□□□□□ -1.44
HERC4-205ENST00000412272 ERBINQ96RT1 1412 aa6.03□□□□□ -1.44
HERC4-205ENST00000412272 SETD1BQ9UPS6 1966 aaKnown RBP6.03□□□□□ -1.44
HERC4-205ENST00000412272 MAGI2Q86UL8 1455 aa6.03□□□□□ -1.44
HERC4-205ENST00000412272 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.03□□□□□ -1.44
HERC4-205ENST00000412272 E2F6O75461 281 aa6.03□□□□□ -1.44
HERC4-205ENST00000412272 BCAR3O75815 825 aa6.03□□□□□ -1.44
HERC4-205ENST00000412272 ERLIN2O94905 339 aa6.03□□□□□ -1.44
HERC4-205ENST00000412272 LMAN1P49257 510 aa6.03□□□□□ -1.44
HERC4-205ENST00000412272 RPAP2Q8IXW5 612 aaPredicted RBP6.03□□□□□ -1.44
HERC4-205ENST00000412272 SENP2Q9HC62 589 aa6.03□□□□□ -1.44
HERC4-205ENST00000412272 GINM1Q9NU53 330 aa6.03□□□□□ -1.44
HERC4-205ENST00000412272 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.03□□□□□ -1.44
HERC4-205ENST00000412272 OPA1O60313 960 aa6.03□□□□□ -1.44
HERC4-205ENST00000412272 ZNF189O75820 626 aaPredicted RBP6.03□□□□□ -1.44
HERC4-205ENST00000412272 COPB2P35606 906 aa6.03□□□□□ -1.44
HERC4-205ENST00000412272 HDLBPQ00341 1268 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms