RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 RTL9Q8NET4 1388 aa3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 UBR2Q8IWV8 1755 aa3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 TNRC18O15417 2968 aaPredicted RBP3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 CACNA1SQ13698 1873 aa3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 POTEFA5A3E0 1075 aa3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 EN2P19622 333 aaPredicted RBP3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 EIF2S2P20042 333 aaKnown RBP3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 RPS8P62241 208 aaKnown RBP3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 GPSM2P81274 684 aa3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 MKRN3Q13064 507 aaKnown RBP3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 ARHGEF6Q15052 776 aa3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 PDIA6Q15084 440 aa3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 SF3B3Q15393 1217 aaKnown RBP3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 PRAMEF18Q5VWM3 479 aa3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 OTUD7BQ6GQQ9 843 aa3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 RSBN1LQ6PCB5 846 aaPredicted RBP3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 MOB2Q70IA6 237 aa3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 OTOP1Q7RTM1 612 aa3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 ARMC9Q7Z3E5 817 aa3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 PODNQ7Z5L7 613 aa3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 NLRP10Q86W26 655 aa3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 OGFOD1Q8N543 542 aa3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 TBC1D16Q8TBP0 767 aa3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 CELF1Q92879 486 aaKnown RBP3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 ARMC5Q96C12 935 aa3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 ERO1AQ96HE7 468 aa3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 THUMPD2Q9BTF0 503 aaKnown RBP3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 R3HDMLQ9H3Y0 253 aa3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 MYOZ2Q9NPC6 264 aa3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 PODXL2Q9NZ53 605 aa3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 ANKIB1Q9P2G1 1089 aa3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 PTPN22Q9Y2R2 807 aa3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 A0A0C4DFX4 3053 aa3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 CLSPNQ9HAW4 1339 aa3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 BCORQ6W2J9 1755 aa3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 ARFGEF2Q9Y6D5 1785 aa3.12□□□□□ -1.91
RNU4-53P-201ENST00000410828 MKI67P46013 3256 aaKnown RBP3.11□□□□□ -1.91
RNU4-53P-201ENST00000410828 USP17L3A6NCW0 530 aa3.11□□□□□ -1.91
RNU4-53P-201ENST00000410828 USP17L4A6NCW7 530 aa3.11□□□□□ -1.91
RNU4-53P-201ENST00000410828 MANSC4A6NHS7 340 aaPredicted RBP3.11□□□□□ -1.91
RNU4-53P-201ENST00000410828 PPP1R12BO60237 982 aaPredicted RBP3.11□□□□□ -1.91
RNU4-53P-201ENST00000410828 UFL1O94874 794 aa3.11□□□□□ -1.91
RNU4-53P-201ENST00000410828 HSP90B1P14625 803 aaKnown RBP3.11□□□□□ -1.91
RNU4-53P-201ENST00000410828 MMP14P50281 582 aa3.11□□□□□ -1.91
RNU4-53P-201ENST00000410828 PTPN12Q05209 780 aaKnown RBP3.11□□□□□ -1.91
RNU4-53P-201ENST00000410828 AIMP1Q12904 312 aaKnown RBP3.11□□□□□ -1.91
RNU4-53P-201ENST00000410828 SLC4A8Q2Y0W8 1093 aa3.11□□□□□ -1.91
RNU4-53P-201ENST00000410828 NBPF9Q3BBW0 867 aa3.11□□□□□ -1.91
RNU4-53P-201ENST00000410828 LDLRAD1Q5T700 205 aa3.11□□□□□ -1.91
RNU4-53P-201ENST00000410828 SPRYD7Q5W111 196 aa3.11□□□□□ -1.91
RNU4-53P-201ENST00000410828 COPS6Q7L5N1 327 aa3.11□□□□□ -1.91
RNU4-53P-201ENST00000410828 USP17L1Q7RTZ2 530 aa3.11□□□□□ -1.91
RNU4-53P-201ENST00000410828 LRP10Q7Z4F1 713 aa3.11□□□□□ -1.91
RNU4-53P-201ENST00000410828 NBPF11Q86T75 865 aa3.11□□□□□ -1.91
RNU4-53P-201ENST00000410828 IFNL1Q8IU54 200 aa3.11□□□□□ -1.91
RNU4-53P-201ENST00000410828 XAGE3Q8WTP9 111 aa3.11□□□□□ -1.91
RNU4-53P-201ENST00000410828 SLC10A4Q96EP9 437 aa3.11□□□□□ -1.91
RNU4-53P-201ENST00000410828 OTUD5Q96G74 571 aa3.11□□□□□ -1.91
RNU4-53P-201ENST00000410828 FAM89AQ96GI7 184 aa3.11□□□□□ -1.91
RNU4-53P-201ENST00000410828 GMLQ99445 158 aa3.11□□□□□ -1.91
RNU4-53P-201ENST00000410828 EFCC1Q9HA90 598 aa3.11□□□□□ -1.91
RNU4-53P-201ENST00000410828 GGA1Q9UJY5 639 aa3.11□□□□□ -1.91
RNU4-53P-201ENST00000410828 SCAF8Q9UPN6 1271 aaKnown RBP3.11□□□□□ -1.91
RNU4-53P-201ENST00000410828 TTC28Q96AY4 2481 aa3.11□□□□□ -1.91
RNU4-53P-201ENST00000410828 COL3A1P02461 1466 aaPredicted RBP3.1□□□□□ -1.91
RNU4-53P-201ENST00000410828 UNCXA6NJT0 531 aa3.1□□□□□ -1.91
RNU4-53P-201ENST00000410828 H0YGN5 161 aa3.1□□□□□ -1.91
RNU4-53P-201ENST00000410828 WNT10BO00744 389 aa3.1□□□□□ -1.91
RNU4-53P-201ENST00000410828 IRS4O14654 1257 aaPredicted RBP3.1□□□□□ -1.91
RNU4-53P-201ENST00000410828 ANXA1P04083 346 aa3.1□□□□□ -1.91
RNU4-53P-201ENST00000410828 ZBTB48P10074 688 aaPredicted RBP3.1□□□□□ -1.91
RNU4-53P-201ENST00000410828 ATP2B4P23634 1241 aa3.1□□□□□ -1.91
RNU4-53P-201ENST00000410828 SP3Q02447 781 aa3.1□□□□□ -1.91
RNU4-53P-201ENST00000410828 PRKG1Q13976 671 aa3.1□□□□□ -1.91
RNU4-53P-201ENST00000410828 NFE2L2Q16236 605 aa3.1□□□□□ -1.91
RNU4-53P-201ENST00000410828 MAP3K11Q16584 847 aa3.1□□□□□ -1.91
RNU4-53P-201ENST00000410828 PROSER3Q2NL68 480 aa3.1□□□□□ -1.91
RNU4-53P-201ENST00000410828 SLC9C1Q4G0N8 1177 aa3.1□□□□□ -1.91
RNU4-53P-201ENST00000410828 CHRDL2Q6WN34 429 aa3.1□□□□□ -1.91
RNU4-53P-201ENST00000410828 ANKRD13DQ6ZTN6 518 aa3.1□□□□□ -1.91
RNU4-53P-201ENST00000410828 APOBEC3FQ8IUX4 373 aaKnown RBP3.1□□□□□ -1.91
RNU4-53P-201ENST00000410828 PLBD2Q8NHP8 589 aa3.1□□□□□ -1.91
RNU4-53P-201ENST00000410828 CD99L2Q8TCZ2 262 aa3.1□□□□□ -1.91
RNU4-53P-201ENST00000410828 DPF3Q92784 378 aa3.1□□□□□ -1.91
RNU4-53P-201ENST00000410828 ZNF333Q96JL9 665 aa3.1□□□□□ -1.91
RNU4-53P-201ENST00000410828 PNNQ9H307 717 aaKnown RBP3.1□□□□□ -1.91
RNU4-53P-201ENST00000410828 BABAM1Q9NWV8 329 aa3.1□□□□□ -1.91
RNU4-53P-201ENST00000410828 TSPYL4Q9UJ04 414 aa3.1□□□□□ -1.91
RNU4-53P-201ENST00000410828 ANGEL1Q9UNK9 670 aaKnown RBP3.1□□□□□ -1.91
RNU4-53P-201ENST00000410828 XDHP47989 1333 aa3.1□□□□□ -1.91
RNU4-53P-201ENST00000410828 MYO3BQ8WXR4 1341 aa3.1□□□□□ -1.91
RNU4-53P-201ENST00000410828 ZNF609O15014 1411 aa3.1□□□□□ -1.91
RNU4-53P-201ENST00000410828 ATP5J2-PTCD1G3V325 749 aa3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 IGF2BP3O00425 579 aaKnown RBP eCLIP3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 WDHD1O75717 1129 aaPredicted RBP3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 SASH1O94885 1247 aa3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 PPP2R1AP30153 589 aa3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 IREB2P48200 963 aaKnown RBP3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 MNX1P50219 401 aaPredicted RBP3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 TRIM26Q12899 539 aaPredicted RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms