RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 USP20Q9Y2K6 914 aa8.49□□□□□ -1.05
CLK1-203ENST00000409769 DLL1O00548 723 aa8.48□□□□□ -1.05
CLK1-203ENST00000409769 FOXD4L6Q3SYB3 417 aaPredicted RBP8.48□□□□□ -1.05
CLK1-203ENST00000409769 FOXD4L3Q6VB84 417 aaPredicted RBP8.48□□□□□ -1.05
CLK1-203ENST00000409769 ETFBKMTQ8IXQ9 262 aa8.48□□□□□ -1.05
CLK1-203ENST00000409769 CCDC82Q8N4S0 544 aa8.48□□□□□ -1.05
CLK1-203ENST00000409769 MRPL18Q9H0U6 180 aaKnown RBP8.48□□□□□ -1.05
CLK1-203ENST00000409769 IREB2P48200 963 aaKnown RBP8.47□□□□□ -1.05
CLK1-203ENST00000409769 SLC51AQ86UW1 340 aa8.47□□□□□ -1.05
CLK1-203ENST00000409769 TMEM130Q8N3G9 435 aa8.47□□□□□ -1.05
CLK1-203ENST00000409769 ABTB2Q8N961 1025 aa8.47□□□□□ -1.05
CLK1-203ENST00000409769 DEAF1O75398 565 aaPredicted RBP8.46□□□□□ -1.06
CLK1-203ENST00000409769 NOS3P29474 1203 aa8.46□□□□□ -1.06
CLK1-203ENST00000409769 LRP8Q14114 963 aa8.46□□□□□ -1.06
CLK1-203ENST00000409769 STK32AQ8WU08 396 aa8.46□□□□□ -1.06
CLK1-203ENST00000409769 CLP1Q92989 425 aaKnown RBP8.46□□□□□ -1.06
CLK1-203ENST00000409769 NSUN5Q96P11 429 aaKnown RBP8.46□□□□□ -1.06
CLK1-203ENST00000409769 SAP130Q9H0E3 1048 aa8.46□□□□□ -1.06
CLK1-203ENST00000409769 UBAP1LF5GYI3 381 aa8.45□□□□□ -1.06
CLK1-203ENST00000409769 J3QW42 95 aa8.45□□□□□ -1.06
CLK1-203ENST00000409769 GDF6Q6KF10 455 aaPredicted RBP8.45□□□□□ -1.06
CLK1-203ENST00000409769 NBPF11Q86T75 865 aa8.45□□□□□ -1.06
CLK1-203ENST00000409769 IL22RA1Q8N6P7 574 aa8.45□□□□□ -1.06
CLK1-203ENST00000409769 OR13H1Q8NG92 308 aa8.45□□□□□ -1.06
CLK1-203ENST00000409769 SPACA7Q96KW9 195 aa8.45□□□□□ -1.06
CLK1-203ENST00000409769 AKTIPQ9H8T0 292 aa8.45□□□□□ -1.06
CLK1-203ENST00000409769 SUPT5HO00267 1087 aaKnown RBP8.44□□□□□ -1.06
CLK1-203ENST00000409769 HYAL2Q12891 473 aa8.44□□□□□ -1.06
CLK1-203ENST00000409769 TRIP4Q15650 581 aaPredicted RBP8.44□□□□□ -1.06
CLK1-203ENST00000409769 PBXIP1Q96AQ6 731 aa8.44□□□□□ -1.06
CLK1-203ENST00000409769 STIM2Q9P246 746 aa8.44□□□□□ -1.06
CLK1-203ENST00000409769 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.43□□□□□ -1.06
CLK1-203ENST00000409769 TNFRSF10BO14763 440 aa8.43□□□□□ -1.06
CLK1-203ENST00000409769 PPP1R15AO75807 674 aaPredicted RBP8.43□□□□□ -1.06
CLK1-203ENST00000409769 ZAP70P43403 619 aa8.43□□□□□ -1.06
CLK1-203ENST00000409769 DZIP1LQ8IYY4 767 aaKnown RBP8.43□□□□□ -1.06
CLK1-203ENST00000409769 RPLP1P05386 114 aaKnown RBP8.42□□□□□ -1.06
CLK1-203ENST00000409769 TMEM164Q5U3C3 297 aa8.42□□□□□ -1.06
CLK1-203ENST00000409769 TTC39BQ5VTQ0 682 aaPredicted RBP8.42□□□□□ -1.06
CLK1-203ENST00000409769 PRR23CQ6ZRP0 262 aa8.42□□□□□ -1.06
CLK1-203ENST00000409769 MEGF10Q96KG7 1140 aa8.42□□□□□ -1.06
CLK1-203ENST00000409769 MKNK1Q9BUB5 465 aa8.42□□□□□ -1.06
CLK1-203ENST00000409769 PPME1Q9Y570 386 aa8.42□□□□□ -1.06
CLK1-203ENST00000409769 F8W735 103 aaPredicted RBP8.41□□□□□ -1.06
CLK1-203ENST00000409769 SMNDC1O75940 238 aaKnown RBP eCLIP8.41□□□□□ -1.06
CLK1-203ENST00000409769 RNF112Q9ULX5 631 aa8.41□□□□□ -1.06
CLK1-203ENST00000409769 SETDB1Q15047 1291 aa8.4□□□□□ -1.06
CLK1-203ENST00000409769 PDE12Q6L8Q7 609 aaKnown RBP8.4□□□□□ -1.06
CLK1-203ENST00000409769 Q6ZS46 218 aa8.4□□□□□ -1.06
CLK1-203ENST00000409769 ABI2Q9NYB9 513 aaPredicted RBP8.4□□□□□ -1.06
CLK1-203ENST00000409769 KIF4AO95239 1232 aa8.39□□□□□ -1.07
CLK1-203ENST00000409769 SCNN1AP37088 669 aa8.39□□□□□ -1.07
CLK1-203ENST00000409769 NAA30Q147X3 362 aaPredicted RBP8.39□□□□□ -1.07
CLK1-203ENST00000409769 PSMG3-AS1Q96PY0 264 aa8.39□□□□□ -1.07
CLK1-203ENST00000409769 KRTAP4-8Q9BYQ9 185 aa8.39□□□□□ -1.07
CLK1-203ENST00000409769 TRIM33Q9UPN9 1127 aa8.39□□□□□ -1.07
CLK1-203ENST00000409769 FAM177BA6PVY3 158 aa8.38□□□□□ -1.07
CLK1-203ENST00000409769 GPR152Q8TDT2 470 aa8.38□□□□□ -1.07
CLK1-203ENST00000409769 GSC2O15499 205 aa8.37□□□□□ -1.07
CLK1-203ENST00000409769 CDC27P30260 824 aa8.37□□□□□ -1.07
CLK1-203ENST00000409769 FAM26DQ5JW98 314 aa8.37□□□□□ -1.07
CLK1-203ENST00000409769 CEP135Q66GS9 1140 aa8.37□□□□□ -1.07
CLK1-203ENST00000409769 FAM117BQ6P1L5 589 aa8.37□□□□□ -1.07
CLK1-203ENST00000409769 HYAL3O43820 417 aaPredicted RBP8.36□□□□□ -1.07
CLK1-203ENST00000409769 ATP2B4P23634 1241 aa8.36□□□□□ -1.07
CLK1-203ENST00000409769 CAPN12Q6ZSI9 719 aa8.36□□□□□ -1.07
CLK1-203ENST00000409769 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.36□□□□□ -1.07
CLK1-203ENST00000409769 KLHL23Q8NBE8 558 aa8.36□□□□□ -1.07
CLK1-203ENST00000409769 CEP41Q9BYV8 373 aa8.36□□□□□ -1.07
CLK1-203ENST00000409769 PCSK2P16519 638 aa8.35□□□□□ -1.07
CLK1-203ENST00000409769 UVSSAQ2YD98 709 aa8.35□□□□□ -1.07
CLK1-203ENST00000409769 NCAPG2Q86XI2 1143 aa8.35□□□□□ -1.07
CLK1-203ENST00000409769 LINC01387J3KSC0 135 aa8.34□□□□□ -1.07
CLK1-203ENST00000409769 ALX3O95076 343 aa8.34□□□□□ -1.07
CLK1-203ENST00000409769 GLB1P16278 677 aa8.34□□□□□ -1.07
CLK1-203ENST00000409769 FSTP19883 344 aa8.34□□□□□ -1.07
CLK1-203ENST00000409769 CD68P34810 354 aaPredicted RBP8.34□□□□□ -1.07
CLK1-203ENST00000409769 ATP11AP98196 1134 aa8.34□□□□□ -1.07
CLK1-203ENST00000409769 COL13A1Q5TAT6 717 aaPredicted RBP8.34□□□□□ -1.07
CLK1-203ENST00000409769 XKR5Q6UX68 686 aa8.34□□□□□ -1.07
CLK1-203ENST00000409769 PBX4Q9BYU1 374 aa8.34□□□□□ -1.07
CLK1-203ENST00000409769 ELP3Q9H9T3 547 aa8.34□□□□□ -1.07
CLK1-203ENST00000409769 PTPRAP18433 802 aa8.33□□□□□ -1.08
CLK1-203ENST00000409769 ZNF438Q7Z4V0 828 aa8.33□□□□□ -1.08
CLK1-203ENST00000409769 TTC16Q8NEE8 873 aa8.33□□□□□ -1.08
CLK1-203ENST00000409769 HELQQ8TDG4 1101 aa8.33□□□□□ -1.08
CLK1-203ENST00000409769 WNT8BQ93098 351 aa8.33□□□□□ -1.08
CLK1-203ENST00000409769 NUDT16Q96DE0 195 aaKnown RBP8.33□□□□□ -1.08
CLK1-203ENST00000409769 RASSF4Q9H2L5 321 aa8.33□□□□□ -1.08
CLK1-203ENST00000409769 RAXQ9Y2V3 346 aa8.33□□□□□ -1.08
CLK1-203ENST00000409769 CEP120Q8N960 986 aa8.32□□□□□ -1.08
CLK1-203ENST00000409769 PMEPA1Q969W9 287 aa8.32□□□□□ -1.08
CLK1-203ENST00000409769 LACRTQ9GZZ8 138 aa8.32□□□□□ -1.08
CLK1-203ENST00000409769 ADAM19Q9H013 955 aa8.32□□□□□ -1.08
CLK1-203ENST00000409769 FSCN2O14926 492 aa8.31□□□□□ -1.08
CLK1-203ENST00000409769 ZBTB39O15060 712 aa8.31□□□□□ -1.08
CLK1-203ENST00000409769 DHX15O43143 795 aaKnown RBP8.31□□□□□ -1.08
CLK1-203ENST00000409769 CABP4P57796 275 aa8.31□□□□□ -1.08
CLK1-203ENST00000409769 ACAD11Q709F0 780 aa8.31□□□□□ -1.08
CLK1-203ENST00000409769 GALNT11Q8NCW6 608 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms