RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 ZC3H12CQ9C0D7 883 aaKnown RBP24.96■■□□□ 1.59
TSPAN4-209ENST00000409543 CREBZFQ9NS37 354 aa24.96■■□□□ 1.59
TSPAN4-209ENST00000409543 GGA1Q9UJY5 639 aa24.96■■□□□ 1.59
TSPAN4-209ENST00000409543 UFL1O94874 794 aa24.95■■□□□ 1.58
TSPAN4-209ENST00000409543 CNTROBQ8N137 903 aa24.95■■□□□ 1.58
TSPAN4-209ENST00000409543 JMYQ8N9B5 988 aa24.95■■□□□ 1.58
TSPAN4-209ENST00000409543 DBNDD1Q9H9R9 158 aa24.95■■□□□ 1.58
TSPAN4-209ENST00000409543 ADARB2Q9NS39 739 aaKnown RBP24.95■■□□□ 1.58
TSPAN4-209ENST00000409543 BSDC1Q9NW68 430 aaPredicted RBP24.95■■□□□ 1.58
TSPAN4-209ENST00000409543 XDHP47989 1333 aa24.94■■□□□ 1.58
TSPAN4-209ENST00000409543 CSF1RP07333 972 aa24.94■■□□□ 1.58
TSPAN4-209ENST00000409543 SLFN5Q08AF3 891 aa24.94■■□□□ 1.58
TSPAN4-209ENST00000409543 MAP1SQ66K74 1059 aaPredicted RBP24.94■■□□□ 1.58
TSPAN4-209ENST00000409543 GPR101Q96P66 508 aaPredicted RBP24.94■■□□□ 1.58
TSPAN4-209ENST00000409543 BCL2L13Q9BXK5 485 aa24.94■■□□□ 1.58
TSPAN4-209ENST00000409543 ECE2O60344 883 aa24.93■■□□□ 1.58
TSPAN4-209ENST00000409543 ATP2B4P23634 1241 aa24.92■■□□□ 1.58
TSPAN4-209ENST00000409543 DOK7Q18PE1 504 aa24.92■■□□□ 1.58
TSPAN4-209ENST00000409543 MINPP1Q9UNW1 487 aa24.92■■□□□ 1.58
TSPAN4-209ENST00000409543 PSMD14O00487 310 aa24.9■■□□□ 1.58
TSPAN4-209ENST00000409543 ITGA6P23229 1130 aa24.9■■□□□ 1.58
TSPAN4-209ENST00000409543 IGHMBP2P38935 993 aaKnown RBP24.9■■□□□ 1.58
TSPAN4-209ENST00000409543 DPF2Q92785 391 aa24.9■■□□□ 1.58
TSPAN4-209ENST00000409543 TMEM88BA6NKF7 163 aa24.89■■□□□ 1.58
TSPAN4-209ENST00000409543 G3V3G9 751 aa24.89■■□□□ 1.58
TSPAN4-209ENST00000409543 ALDH1L1O75891 902 aa24.89■■□□□ 1.58
TSPAN4-209ENST00000409543 FAM161AQ3B820 660 aa24.89■■□□□ 1.58
TSPAN4-209ENST00000409543 DCAF8Q5TAQ9 597 aa24.89■■□□□ 1.58
TSPAN4-209ENST00000409543 MRPL50Q8N5N7 158 aaKnown RBP24.89■■□□□ 1.58
TSPAN4-209ENST00000409543 CNOT7Q9UIV1 285 aaKnown RBP24.89■■□□□ 1.58
TSPAN4-209ENST00000409543 GRM8O00222 908 aa24.88■■□□□ 1.57
TSPAN4-209ENST00000409543 FOXO4P98177 505 aa24.88■■□□□ 1.57
TSPAN4-209ENST00000409543 SLC4A10Q6U841 1118 aa24.88■■□□□ 1.57
TSPAN4-209ENST00000409543 CDCA7LQ96GN5 454 aa24.88■■□□□ 1.57
TSPAN4-209ENST00000409543 KCNQ5Q9NR82 932 aa24.88■■□□□ 1.57
TSPAN4-209ENST00000409543 ZBTB12Q9Y330 459 aaPredicted RBP24.88■■□□□ 1.57
TSPAN4-209ENST00000409543 SPEF2Q9C093 1822 aa24.87■■□□□ 1.57
TSPAN4-209ENST00000409543 H7C1D1 291 aa24.87■■□□□ 1.57
TSPAN4-209ENST00000409543 RPS12P25398 132 aaKnown RBP24.87■■□□□ 1.57
TSPAN4-209ENST00000409543 TRMT2AQ8IZ69 625 aaKnown RBP24.87■■□□□ 1.57
TSPAN4-209ENST00000409543 SRCIN1Q9C0H9 1055 aa24.87■■□□□ 1.57
TSPAN4-209ENST00000409543 MICALL2Q8IY33 904 aa24.86■■□□□ 1.57
TSPAN4-209ENST00000409543 MPHOSPH8Q99549 860 aa24.86■■□□□ 1.57
TSPAN4-209ENST00000409543 PGAP2Q9UHJ9 254 aa24.86■■□□□ 1.57
TSPAN4-209ENST00000409543 ANKRD18BA2A2Z9 1011 aa24.85■■□□□ 1.57
TSPAN4-209ENST00000409543 VIL1P09327 827 aaKnown RBP24.85■■□□□ 1.57
TSPAN4-209ENST00000409543 CCT4P50991 539 aaKnown RBP24.85■■□□□ 1.57
TSPAN4-209ENST00000409543 ZC3H15Q8WU90 426 aaKnown RBP24.85■■□□□ 1.57
TSPAN4-209ENST00000409543 SSH1Q8WYL5 1049 aa24.85■■□□□ 1.57
TSPAN4-209ENST00000409543 ANKRD2Q9GZV1 360 aa24.85■■□□□ 1.57
TSPAN4-209ENST00000409543 C9orf78Q9NZ63 289 aaPredicted RBP24.85■■□□□ 1.57
TSPAN4-209ENST00000409543 PTPRCP08575 1304 aa24.85■■□□□ 1.57
TSPAN4-209ENST00000409543 MED23Q9ULK4 1368 aa24.84■■□□□ 1.57
TSPAN4-209ENST00000409543 SCN9AQ15858 1988 aa24.84■■□□□ 1.57
TSPAN4-209ENST00000409543 SHTN1A0MZ66 631 aa24.84■■□□□ 1.57
TSPAN4-209ENST00000409543 WTIPA6NIX2 430 aaPredicted RBP24.84■■□□□ 1.57
TSPAN4-209ENST00000409543 HIRAP54198 1017 aaPredicted RBP24.84■■□□□ 1.57
TSPAN4-209ENST00000409543 IFIT5Q13325 482 aaKnown RBP24.84■■□□□ 1.57
TSPAN4-209ENST00000409543 LEMD3Q9Y2U8 911 aa24.84■■□□□ 1.57
TSPAN4-209ENST00000409543 PODNQ7Z5L7 613 aa24.83■■□□□ 1.57
TSPAN4-209ENST00000409543 TRPM4Q8TD43 1214 aa24.83■■□□□ 1.57
TSPAN4-209ENST00000409543 MKRN1Q9UHC7 482 aaKnown RBP24.83■■□□□ 1.57
TSPAN4-209ENST00000409543 ALDH1L2Q3SY69 923 aa24.82■■□□□ 1.56
TSPAN4-209ENST00000409543 EPHA10Q5JZY3 1008 aa24.82■■□□□ 1.56
TSPAN4-209ENST00000409543 LMBR1LQ6UX01 489 aa24.82■■□□□ 1.56
TSPAN4-209ENST00000409543 CNTNAP1P78357 1384 aa24.81■■□□□ 1.56
TSPAN4-209ENST00000409543 CHMP3Q9Y3E7 222 aa24.81■■□□□ 1.56
TSPAN4-209ENST00000409543 TRAF5O00463 557 aa24.8■■□□□ 1.56
TSPAN4-209ENST00000409543 ZNF804BA4D1E1 1349 aa24.8■■□□□ 1.56
TSPAN4-209ENST00000409543 UTYO14607 1347 aa24.8■■□□□ 1.56
TSPAN4-209ENST00000409543 ZNF609O15014 1411 aa24.79■■□□□ 1.56
TSPAN4-209ENST00000409543 CT47B1P0C2W7 299 aaPredicted RBP24.79■■□□□ 1.56
TSPAN4-209ENST00000409543 FMR1Q06787 632 aaKnown RBP eCLIP24.79■■□□□ 1.56
TSPAN4-209ENST00000409543 CHRNDQ07001 517 aa24.79■■□□□ 1.56
TSPAN4-209ENST00000409543 CCDC57Q2TAC2 916 aa24.79■■□□□ 1.56
TSPAN4-209ENST00000409543 RSBN1LQ6PCB5 846 aaPredicted RBP24.79■■□□□ 1.56
TSPAN4-209ENST00000409543 SAMD7Q7Z3H4 446 aa24.79■■□□□ 1.56
TSPAN4-209ENST00000409543 AGBL3Q8NEM8 1001 aa24.79■■□□□ 1.56
TSPAN4-209ENST00000409543 PSME4Q14997 1843 aa24.79■■□□□ 1.56
TSPAN4-209ENST00000409543 USP17L3A6NCW0 530 aa24.78■■□□□ 1.56
TSPAN4-209ENST00000409543 USP17L4A6NCW7 530 aa24.78■■□□□ 1.56
TSPAN4-209ENST00000409543 TBC1D10BQ4KMP7 808 aaPredicted RBP24.78■■□□□ 1.56
TSPAN4-209ENST00000409543 USP17L1Q7RTZ2 530 aa24.78■■□□□ 1.56
TSPAN4-209ENST00000409543 COA1Q9GZY4 146 aa24.78■■□□□ 1.56
TSPAN4-209ENST00000409543 RASSF10A6NK89 507 aa24.77■■□□□ 1.56
TSPAN4-209ENST00000409543 NBPF7P0C2Y1 421 aaPredicted RBP24.77■■□□□ 1.56
TSPAN4-209ENST00000409543 CDC37L1Q7L3B6 337 aa24.77■■□□□ 1.56
TSPAN4-209ENST00000409543 TXNRD3Q86VQ6 643 aa24.77■■□□□ 1.56
TSPAN4-209ENST00000409543 SUCLG2Q96I99 432 aa24.77■■□□□ 1.56
TSPAN4-209ENST00000409543 TRPM7Q96QT4 1865 aa24.77■■□□□ 1.56
TSPAN4-209ENST00000409543 EGFRP00533 1210 aa24.76■■□□□ 1.55
TSPAN4-209ENST00000409543 CST9Q5W186 159 aa24.76■■□□□ 1.55
TSPAN4-209ENST00000409543 KAZALD1Q96I82 304 aa24.76■■□□□ 1.55
TSPAN4-209ENST00000409543 GMLQ99445 158 aa24.76■■□□□ 1.55
TSPAN4-209ENST00000409543 GLIS2Q9BZE0 524 aaPredicted RBP24.76■■□□□ 1.55
TSPAN4-209ENST00000409543 SMC4Q9NTJ3 1288 aa24.76■■□□□ 1.55
TSPAN4-209ENST00000409543 ABT1Q9ULW3 272 aaKnown RBP24.76■■□□□ 1.55
TSPAN4-209ENST00000409543 PCNTO95613 3336 aa24.76■■□□□ 1.55
TSPAN4-209ENST00000409543 KCNJ4P48050 445 aa24.75■■□□□ 1.55
TSPAN4-209ENST00000409543 VEGFBP49765 207 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms