RNA–Protein interactions for RNA: ENST00000409286.5

LIMS2-204, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-204ENST00000409286 XAGE2Q96GT9 111 aa23.22■■□□□ 1.31
LIMS2-204ENST00000409286 UTP14AQ9BVJ6 771 aaKnown RBP23.22■■□□□ 1.31
LIMS2-204ENST00000409286 ZNF831Q5JPB2 1677 aa23.22■■□□□ 1.31
LIMS2-204ENST00000409286 BAG4O95429 457 aaKnown RBP23.22■■□□□ 1.31
LIMS2-204ENST00000409286 GORABQ5T7V8 394 aa23.22■■□□□ 1.31
LIMS2-204ENST00000409286 SUSD4Q5VX71 490 aa23.22■■□□□ 1.31
LIMS2-204ENST00000409286 RUFY3Q7L099 469 aa23.22■■□□□ 1.31
LIMS2-204ENST00000409286 PDRG1Q9NUG6 133 aa23.22■■□□□ 1.31
LIMS2-204ENST00000409286 ADCK5Q3MIX3 580 aa23.21■■□□□ 1.31
LIMS2-204ENST00000409286 METTL24Q5JXM2 366 aa23.21■■□□□ 1.31
LIMS2-204ENST00000409286 TTC39AQ5SRH9 613 aa23.21■■□□□ 1.31
LIMS2-204ENST00000409286 NOL8Q76FK4 1167 aaKnown RBP23.21■■□□□ 1.31
LIMS2-204ENST00000409286 USP21Q9UK80 565 aa23.21■■□□□ 1.31
LIMS2-204ENST00000409286 U3KPZ7 1027 aaPredicted RBP23.21■■□□□ 1.31
LIMS2-204ENST00000409286 ABCC12Q96J65 1359 aa23.21■■□□□ 1.31
LIMS2-204ENST00000409286 SPEF2Q9C093 1822 aa23.21■■□□□ 1.31
LIMS2-204ENST00000409286 LRRFIP1Q32MZ4 808 aaKnown RBP23.2■■□□□ 1.3
LIMS2-204ENST00000409286 ZSCAN31Q96LW9 406 aaPredicted RBP23.2■■□□□ 1.3
LIMS2-204ENST00000409286 CNNM1Q9NRU3 951 aa23.2■■□□□ 1.3
LIMS2-204ENST00000409286 RIC1Q4ADV7 1423 aa23.2■■□□□ 1.3
LIMS2-204ENST00000409286 RPAP1Q9BWH6 1393 aaPredicted RBP23.19■■□□□ 1.3
LIMS2-204ENST00000409286 ATP2B3Q16720 1220 aa23.19■■□□□ 1.3
LIMS2-204ENST00000409286 ALDH8A1Q9H2A2 487 aaPredicted RBP23.19■■□□□ 1.3
LIMS2-204ENST00000409286 ZNF652Q9Y2D9 606 aa23.19■■□□□ 1.3
LIMS2-204ENST00000409286 RGL2O15211 777 aa23.19■■□□□ 1.3
LIMS2-204ENST00000409286 ADORA1P30542 326 aa23.19■■□□□ 1.3
LIMS2-204ENST00000409286 KRT32Q14532 448 aa23.19■■□□□ 1.3
LIMS2-204ENST00000409286 ZMYM1Q5SVZ6 1142 aa23.19■■□□□ 1.3
LIMS2-204ENST00000409286 CLEC4GQ6UXB4 293 aa23.19■■□□□ 1.3
LIMS2-204ENST00000409286 AEBP2Q6ZN18 517 aaPredicted RBP23.19■■□□□ 1.3
LIMS2-204ENST00000409286 ZDHHC9Q9Y397 364 aa23.19■■□□□ 1.3
LIMS2-204ENST00000409286 MYH3P11055 1940 aa23.18■■□□□ 1.3
LIMS2-204ENST00000409286 RNF113AO15541 343 aaKnown RBP23.18■■□□□ 1.3
LIMS2-204ENST00000409286 ZNF512BQ96KM6 892 aaPredicted RBP23.18■■□□□ 1.3
LIMS2-204ENST00000409286 PKP1Q13835 747 aa23.17■■□□□ 1.3
LIMS2-204ENST00000409286 VGLL2Q8N8G2 317 aa23.17■■□□□ 1.3
LIMS2-204ENST00000409286 SH2B1Q9NRF2 756 aaPredicted RBP23.17■■□□□ 1.3
LIMS2-204ENST00000409286 MYH14Q7Z406 1995 aaKnown RBP23.17■■□□□ 1.3
LIMS2-204ENST00000409286 THSD7AQ9UPZ6 1657 aa23.17■■□□□ 1.3
LIMS2-204ENST00000409286 BRD1O95696 1058 aa23.16■■□□□ 1.3
LIMS2-204ENST00000409286 LINC00116Q8NCU8 138 aa23.16■■□□□ 1.3
LIMS2-204ENST00000409286 MROH5Q6ZUA9 1318 aa23.16■■□□□ 1.3
LIMS2-204ENST00000409286 CNTNAP4Q9C0A0 1308 aa23.16■■□□□ 1.3
LIMS2-204ENST00000409286 CPA1P15085 419 aa23.16■■□□□ 1.3
LIMS2-204ENST00000409286 SEC62Q99442 399 aaKnown RBP23.16■■□□□ 1.3
LIMS2-204ENST00000409286 NIP7Q9Y221 180 aaKnown RBP eCLIP23.16■■□□□ 1.3
LIMS2-204ENST00000409286 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.16■■□□□ 1.3
LIMS2-204ENST00000409286 COL5A3P25940 1745 aaPredicted RBP23.15■■□□□ 1.3
LIMS2-204ENST00000409286 PDE8BO95263 885 aa23.15■■□□□ 1.3
LIMS2-204ENST00000409286 NTSR2O95665 410 aa23.15■■□□□ 1.3
LIMS2-204ENST00000409286 ZFYP08048 801 aaPredicted RBP23.15■■□□□ 1.3
LIMS2-204ENST00000409286 ANKRD1Q15327 319 aa23.15■■□□□ 1.3
LIMS2-204ENST00000409286 BLOC1S2Q6QNY1 142 aa23.15■■□□□ 1.3
LIMS2-204ENST00000409286 DSCC1Q9BVC3 393 aa23.15■■□□□ 1.3
LIMS2-204ENST00000409286 HCLS1P14317 486 aaPredicted RBP23.14■■□□□ 1.29
LIMS2-204ENST00000409286 RC3H1Q5TC82 1133 aaKnown RBP23.14■■□□□ 1.29
LIMS2-204ENST00000409286 CCDC129Q6ZRS4 1044 aa23.14■■□□□ 1.29
LIMS2-204ENST00000409286 RTL9Q8NET4 1388 aa23.14■■□□□ 1.29
LIMS2-204ENST00000409286 CHGBP05060 677 aa23.13■■□□□ 1.29
LIMS2-204ENST00000409286 RPS6KB1P23443 525 aa23.13■■□□□ 1.29
LIMS2-204ENST00000409286 FKBP4Q02790 459 aaKnown RBP eCLIP23.13■■□□□ 1.29
LIMS2-204ENST00000409286 CCDC152Q4G0S7 254 aa23.13■■□□□ 1.29
LIMS2-204ENST00000409286 MEX3CQ5U5Q3 659 aaKnown RBP23.13■■□□□ 1.29
LIMS2-204ENST00000409286 LRP5O75197 1615 aa23.12■■□□□ 1.29
LIMS2-204ENST00000409286 PUM3Q15397 648 aaKnown RBP23.11■■□□□ 1.29
LIMS2-204ENST00000409286 LPIN2Q92539 896 aa23.11■■□□□ 1.29
LIMS2-204ENST00000409286 FAM177BA6PVY3 158 aa23.1■■□□□ 1.29
LIMS2-204ENST00000409286 FGFR2P21802 821 aa23.1■■□□□ 1.29
LIMS2-204ENST00000409286 ZAP70P43403 619 aa23.1■■□□□ 1.29
LIMS2-204ENST00000409286 MCTP1Q6DN14 999 aa23.1■■□□□ 1.29
LIMS2-204ENST00000409286 WDR33Q9C0J8 1336 aaKnown RBP23.09■■□□□ 1.29
LIMS2-204ENST00000409286 UQCRFS1P1P0C7P4 283 aa23.09■■□□□ 1.29
LIMS2-204ENST00000409286 SCARF1Q14162 830 aa23.09■■□□□ 1.29
LIMS2-204ENST00000409286 GJD4Q96KN9 370 aaPredicted RBP23.09■■□□□ 1.29
LIMS2-204ENST00000409286 NEK1Q96PY6 1258 aa23.09■■□□□ 1.29
LIMS2-204ENST00000409286 MPHOSPH8Q99549 860 aa23.09■■□□□ 1.29
LIMS2-204ENST00000409286 MAST3O60307 1309 aa23.09■■□□□ 1.29
LIMS2-204ENST00000409286 TTF1Q15361 905 aaPredicted RBP23.09■■□□□ 1.29
LIMS2-204ENST00000409286 SMC3Q9UQE7 1217 aa23.09■■□□□ 1.29
LIMS2-204ENST00000409286 TAF6LQ9Y6J9 622 aa23.09■■□□□ 1.29
LIMS2-204ENST00000409286 RPS6KA4O75676 772 aa23.08■■□□□ 1.29
LIMS2-204ENST00000409286 CYP21A2P08686 494 aa23.08■■□□□ 1.29
LIMS2-204ENST00000409286 ZSCAN25Q6NSZ9 544 aa23.08■■□□□ 1.29
LIMS2-204ENST00000409286 LARP6Q9BRS8 491 aaKnown RBP23.08■■□□□ 1.29
LIMS2-204ENST00000409286 BCORQ6W2J9 1755 aa23.08■■□□□ 1.29
LIMS2-204ENST00000409286 NHSQ6T4R5 1651 aa23.08■■□□□ 1.28
LIMS2-204ENST00000409286 ONECUT3O60422 494 aaPredicted RBP23.07■■□□□ 1.28
LIMS2-204ENST00000409286 LARGE1O95461 756 aa23.07■■□□□ 1.28
LIMS2-204ENST00000409286 HSPD1P10809 573 aaKnown RBP23.07■■□□□ 1.28
LIMS2-204ENST00000409286 ARID4AP29374 1257 aaPredicted RBP23.07■■□□□ 1.28
LIMS2-204ENST00000409286 HSPA1LP34931 641 aa23.07■■□□□ 1.28
LIMS2-204ENST00000409286 IGHMBP2P38935 993 aaKnown RBP23.07■■□□□ 1.28
LIMS2-204ENST00000409286 MCAMP43121 646 aa23.07■■□□□ 1.28
LIMS2-204ENST00000409286 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.07■■□□□ 1.28
LIMS2-204ENST00000409286 LMBRD1Q9NUN5 540 aa23.07■■□□□ 1.28
LIMS2-204ENST00000409286 HMGB1P09429 215 aaKnown RBP23.06■■□□□ 1.28
LIMS2-204ENST00000409286 SLC5A1P13866 664 aa23.06■■□□□ 1.28
LIMS2-204ENST00000409286 ME3Q16798 604 aa23.06■■□□□ 1.28
LIMS2-204ENST00000409286 KLHL40Q2TBA0 621 aa23.06■■□□□ 1.28
LIMS2-204ENST00000409286 SLFNL1Q499Z3 407 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms