RNA–Protein interactions for RNA: ENST00000407417.7

NFIA-208, Transcript of nuclear factor I A, human

TSL 2 BASIC

Gene NFIA, Length 2,123 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFIA-208	ENST00000407417	KIAA1551	Q9HCM1	1747 aa		10.11	□□□□□ -0.79
NFIA-208	ENST00000407417	FAM177B	A6PVY3	158 aa		10.11	□□□□□ -0.79
NFIA-208	ENST00000407417	SMTNL1	A8MU46	457 aa		10.11	□□□□□ -0.79
NFIA-208	ENST00000407417	KCNA3	P22001	575 aa		10.11	□□□□□ -0.79
NFIA-208	ENST00000407417	TGFB2	P61812	414 aa		10.11	□□□□□ -0.79
NFIA-208	ENST00000407417	NCBP1	Q09161	790 aa	Known RBP	10.11	□□□□□ -0.79
NFIA-208	ENST00000407417	SLFNL1	Q499Z3	407 aa		10.11	□□□□□ -0.79
NFIA-208	ENST00000407417	TSPYL6	Q8N831	410 aa		10.11	□□□□□ -0.79
NFIA-208	ENST00000407417	GCC1	Q96CN9	775 aa		10.11	□□□□□ -0.79
NFIA-208	ENST00000407417	MAP3K15	Q6ZN16	1313 aa		10.11	□□□□□ -0.79
NFIA-208	ENST00000407417	N4BP2	Q86UW6	1770 aa	Predicted RBP	10.11	□□□□□ -0.79
NFIA-208	ENST00000407417	KIF13B	Q9NQT8	1826 aa		10.11	□□□□□ -0.79
NFIA-208	ENST00000407417	YY1	P25490	414 aa		10.1	□□□□□ -0.79
NFIA-208	ENST00000407417	AIMP1	Q12904	312 aa	Known RBP	10.1	□□□□□ -0.79
NFIA-208	ENST00000407417	PRR5L	Q6MZQ0	368 aa		10.1	□□□□□ -0.79
NFIA-208	ENST00000407417	CLEC4G	Q6UXB4	293 aa		10.1	□□□□□ -0.79
NFIA-208	ENST00000407417	KIF6	Q6ZMV9	814 aa		10.1	□□□□□ -0.79
NFIA-208	ENST00000407417	CHD1L	Q86WJ1	897 aa		10.1	□□□□□ -0.79
NFIA-208	ENST00000407417	KIF18A	Q8NI77	898 aa		10.1	□□□□□ -0.79
NFIA-208	ENST00000407417	NIP7	Q9Y221	180 aa	Known RBP eCLIP	10.1	□□□□□ -0.79
NFIA-208	ENST00000407417	ZNF652	Q9Y2D9	606 aa		10.1	□□□□□ -0.79
NFIA-208	ENST00000407417	ST18	O60284	1047 aa		10.1	□□□□□ -0.79
NFIA-208	ENST00000407417	HOXB7	P09629	217 aa		10.1	□□□□□ -0.79
NFIA-208	ENST00000407417	AFDN	P55196	1824 aa	Known RBP	10.1	□□□□□ -0.79
NFIA-208	ENST00000407417	COPS6	Q7L5N1	327 aa		10.1	□□□□□ -0.79
NFIA-208	ENST00000407417	XAGE3	Q8WTP9	111 aa		10.1	□□□□□ -0.79
NFIA-208	ENST00000407417	TSC1	Q92574	1164 aa		10.1	□□□□□ -0.79
NFIA-208	ENST00000407417	DDX21	Q9NR30	783 aa	Known RBP eCLIP	10.1	□□□□□ -0.79
NFIA-208	ENST00000407417	NRXN2	Q9P2S2	1712 aa		10.1	□□□□□ -0.79
NFIA-208	ENST00000407417	ERVV-1	B6SEH8	477 aa		10.09	□□□□□ -0.79
NFIA-208	ENST00000407417	ZBTB22	O15209	634 aa		10.09	□□□□□ -0.79
NFIA-208	ENST00000407417	NPHP1	O15259	732 aa		10.09	□□□□□ -0.79
NFIA-208	ENST00000407417	CAPN2	P17655	700 aa		10.09	□□□□□ -0.79
NFIA-208	ENST00000407417	GPT	P24298	496 aa		10.09	□□□□□ -0.79
NFIA-208	ENST00000407417	CNBD1	Q8NA66	436 aa		10.09	□□□□□ -0.79
NFIA-208	ENST00000407417	BCS1L	Q9Y276	419 aa		10.09	□□□□□ -0.79
NFIA-208	ENST00000407417	UTRN	P46939	3433 aa		10.09	□□□□□ -0.79
NFIA-208	ENST00000407417	AK9	Q5TCS8	1911 aa		10.09	□□□□□ -0.79
NFIA-208	ENST00000407417	CDC45	O75419	566 aa		10.09	□□□□□ -0.79
NFIA-208	ENST00000407417	MCM2	P49736	904 aa		10.09	□□□□□ -0.79
NFIA-208	ENST00000407417	NBPF5P	Q86XG9	351 aa	Predicted RBP	10.09	□□□□□ -0.79
NFIA-208	ENST00000407417	ZBTB40	Q9NUA8	1239 aa		10.09	□□□□□ -0.79
NFIA-208	ENST00000407417	BCCIP	Q9P287	314 aa	Known RBP eCLIP	10.09	□□□□□ -0.79
NFIA-208	ENST00000407417	IL16	Q14005	1332 aa		10.08	□□□□□ -0.8
NFIA-208	ENST00000407417	MUM1L1	Q5H9M0	696 aa		10.08	□□□□□ -0.8
NFIA-208	ENST00000407417	RNF20	Q5VTR2	975 aa		10.08	□□□□□ -0.8
NFIA-208	ENST00000407417	TBC1D9	Q6ZT07	1266 aa		10.08	□□□□□ -0.8
NFIA-208	ENST00000407417	C2CD5	Q86YS7	1000 aa		10.08	□□□□□ -0.8
NFIA-208	ENST00000407417	ZNF397	Q8NF99	534 aa	Predicted RBP	10.08	□□□□□ -0.8
NFIA-208	ENST00000407417	SECISBP2L	Q93073	1101 aa	Known RBP	10.08	□□□□□ -0.8
NFIA-208	ENST00000407417	UBN2	Q6ZU65	1347 aa		10.07	□□□□□ -0.8
NFIA-208	ENST00000407417	GRIN3B	O60391	1043 aa		10.07	□□□□□ -0.8
NFIA-208	ENST00000407417	REC8	O95072	547 aa		10.07	□□□□□ -0.8
NFIA-208	ENST00000407417	ZNF428	Q96B54	188 aa		10.07	□□□□□ -0.8
NFIA-208	ENST00000407417	RNF216	Q9NWF9	866 aa	Predicted RBP	10.07	□□□□□ -0.8
NFIA-208	ENST00000407417	RBM27	Q9P2N5	1060 aa	Known RBP	10.07	□□□□□ -0.8
NFIA-208	ENST00000407417	DBF4	Q9UBU7	674 aa	Predicted RBP	10.07	□□□□□ -0.8
NFIA-208	ENST00000407417	RGL2	O15211	777 aa		10.07	□□□□□ -0.8
NFIA-208	ENST00000407417	KDM4A	O75164	1064 aa		10.07	□□□□□ -0.8
NFIA-208	ENST00000407417	ADCY5	O95622	1261 aa		10.07	□□□□□ -0.8
NFIA-208	ENST00000407417	CYP2C19	P33261	490 aa		10.07	□□□□□ -0.8
NFIA-208	ENST00000407417	ST5	P78524	1137 aa		10.07	□□□□□ -0.8
NFIA-208	ENST00000407417	GIGYF2	Q6Y7W6	1299 aa	Known RBP	10.07	□□□□□ -0.8
NFIA-208	ENST00000407417	JARID2	Q92833	1246 aa	Predicted RBP	10.07	□□□□□ -0.8
NFIA-208	ENST00000407417	BRIP1	Q9BX63	1249 aa		10.07	□□□□□ -0.8
NFIA-208	ENST00000407417	PIM2	Q9P1W9	311 aa		10.07	□□□□□ -0.8
NFIA-208	ENST00000407417	FEZ2	Q9UHY8	353 aa	Predicted RBP	10.07	□□□□□ -0.8
NFIA-208	ENST00000407417	ATP10D	Q9P241	1426 aa		10.07	□□□□□ -0.8
NFIA-208	ENST00000407417	TRIM6-TRIM34	B2RNG4	842 aa		10.06	□□□□□ -0.8
NFIA-208	ENST00000407417	SUSD4	Q5VX71	490 aa		10.06	□□□□□ -0.8
NFIA-208	ENST00000407417	ATF7IP	Q6VMQ6	1270 aa		10.06	□□□□□ -0.8
NFIA-208	ENST00000407417	NUTM1	Q86Y26	1132 aa		10.06	□□□□□ -0.8
NFIA-208	ENST00000407417	ZNF34	Q8IZ26	560 aa		10.06	□□□□□ -0.8
NFIA-208	ENST00000407417	TMEM87A	Q8NBN3	555 aa		10.06	□□□□□ -0.8
NFIA-208	ENST00000407417	ZNF622	Q969S3	477 aa	Known RBP eCLIP	10.06	□□□□□ -0.8	9e-12	■□□□□ 10.7
NFIA-208	ENST00000407417	TRIM34	Q9BYJ4	488 aa		10.06	□□□□□ -0.8
NFIA-208	ENST00000407417	PHAX	Q9H814	394 aa	Known RBP	10.06	□□□□□ -0.8
NFIA-208	ENST00000407417	BRMS1	Q9HCU9	246 aa		10.06	□□□□□ -0.8
NFIA-208	ENST00000407417		H0YIN7	160 aa		10.06	□□□□□ -0.8
NFIA-208	ENST00000407417	IPO8	O15397	1037 aa	Known RBP	10.06	□□□□□ -0.8
NFIA-208	ENST00000407417	TWISTNB	Q3B726	338 aa	Predicted RBP	10.06	□□□□□ -0.8
NFIA-208	ENST00000407417	DALRD3	Q5D0E6	543 aa	Known RBP	10.06	□□□□□ -0.8
NFIA-208	ENST00000407417	RNF214	Q8ND24	703 aa		10.06	□□□□□ -0.8
NFIA-208	ENST00000407417	KIF1BP	Q96EK5	621 aa		10.06	□□□□□ -0.8
NFIA-208	ENST00000407417	ZDHHC9	Q9Y397	364 aa		10.06	□□□□□ -0.8
NFIA-208	ENST00000407417	ANKRD31	Q8N7Z5	1873 aa		10.05	□□□□□ -0.8
NFIA-208	ENST00000407417	BRD1	O95696	1058 aa		10.05	□□□□□ -0.8
NFIA-208	ENST00000407417	PDE6B	P35913	854 aa		10.05	□□□□□ -0.8
NFIA-208	ENST00000407417	EXOSC9	Q06265	439 aa	Known RBP	10.05	□□□□□ -0.8
NFIA-208	ENST00000407417	ERFE	Q4G0M1	354 aa		10.05	□□□□□ -0.8
NFIA-208	ENST00000407417	TPTE2	Q6XPS3	522 aa		10.05	□□□□□ -0.8
NFIA-208	ENST00000407417	INTS4	Q96HW7	963 aa	Known RBP	10.05	□□□□□ -0.8
NFIA-208	ENST00000407417	TTC12	Q9H892	705 aa	Predicted RBP	10.05	□□□□□ -0.8
NFIA-208	ENST00000407417	FOXD4L1	Q9NU39	408 aa		10.05	□□□□□ -0.8
NFIA-208	ENST00000407417	HYPK	Q9NX55	129 aa		10.05	□□□□□ -0.8
NFIA-208	ENST00000407417	ABCC12	Q96J65	1359 aa		10.05	□□□□□ -0.8
NFIA-208	ENST00000407417	IGSF3	O75054	1194 aa		10.04	□□□□□ -0.8
NFIA-208	ENST00000407417	TRIM27	P14373	513 aa		10.04	□□□□□ -0.8
NFIA-208	ENST00000407417	BRPF1	P55201	1214 aa	Predicted RBP	10.04	□□□□□ -0.8
NFIA-208	ENST00000407417	CCDC183	Q5T5S1	534 aa		10.04	□□□□□ -0.8

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