RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 MAP1SQ66K74 1059 aaPredicted RBP16.94■□□□□ 0.3
SDF4-203ENST00000403997 CNTROBQ8N137 903 aa16.94■□□□□ 0.3
SDF4-203ENST00000403997 PODXL2Q9NZ53 605 aa16.94■□□□□ 0.3
SDF4-203ENST00000403997 E9PSI1 815 aa16.93■□□□□ 0.3
SDF4-203ENST00000403997 ITGBL1O95965 494 aaPredicted RBP16.93■□□□□ 0.3
SDF4-203ENST00000403997 USP50Q70EL3 339 aaPredicted RBP16.93■□□□□ 0.3
SDF4-203ENST00000403997 PLA2G12BQ9BX93 195 aa16.93■□□□□ 0.3
SDF4-203ENST00000403997 CREBZFQ9NS37 354 aa16.93■□□□□ 0.3
SDF4-203ENST00000403997 DUOX1Q9NRD9 1551 aa16.93■□□□□ 0.3
SDF4-203ENST00000403997 PASKQ96RG2 1323 aa16.93■□□□□ 0.3
SDF4-203ENST00000403997 LRRC37AA6NMS7 1700 aa16.93■□□□□ 0.3
SDF4-203ENST00000403997 CASP7P55210 303 aa16.92■□□□□ 0.3
SDF4-203ENST00000403997 BEND3Q5T5X7 828 aa16.92■□□□□ 0.3
SDF4-203ENST00000403997 ADARB2Q9NS39 739 aaKnown RBP16.92■□□□□ 0.3
SDF4-203ENST00000403997 BSDC1Q9NW68 430 aaPredicted RBP16.92■□□□□ 0.3
SDF4-203ENST00000403997 PSMD14O00487 310 aa16.91■□□□□ 0.3
SDF4-203ENST00000403997 ECE2O60344 883 aa16.91■□□□□ 0.3
SDF4-203ENST00000403997 ATP2B4P23634 1241 aa16.91■□□□□ 0.3
SDF4-203ENST00000403997 IGHMBP2P38935 993 aaKnown RBP16.91■□□□□ 0.3
SDF4-203ENST00000403997 SLC4A10Q6U841 1118 aa16.91■□□□□ 0.3
SDF4-203ENST00000403997 PCDH10Q9P2E7 1040 aa16.91■□□□□ 0.3
SDF4-203ENST00000403997 MINPP1Q9UNW1 487 aa16.91■□□□□ 0.3
SDF4-203ENST00000403997 XDHP47989 1333 aa16.91■□□□□ 0.3
SDF4-203ENST00000403997 H7C1D1 291 aa16.9■□□□□ 0.3
SDF4-203ENST00000403997 CSF1RP07333 972 aa16.9■□□□□ 0.3
SDF4-203ENST00000403997 ITGA6P23229 1130 aa16.9■□□□□ 0.3
SDF4-203ENST00000403997 SLFN5Q08AF3 891 aa16.9■□□□□ 0.3
SDF4-203ENST00000403997 JMYQ8N9B5 988 aa16.9■□□□□ 0.3
SDF4-203ENST00000403997 KCNQ5Q9NR82 932 aa16.9■□□□□ 0.3
SDF4-203ENST00000403997 CNOT7Q9UIV1 285 aaKnown RBP16.9■□□□□ 0.3
SDF4-203ENST00000403997 ZBTB12Q9Y330 459 aaPredicted RBP16.9■□□□□ 0.3
SDF4-203ENST00000403997 LTBP1Q14766 1721 aa16.9■□□□□ 0.3
SDF4-203ENST00000403997 RTL9Q8NET4 1388 aa16.89■□□□□ 0.3
SDF4-203ENST00000403997 TMEM88BA6NKF7 163 aa16.89■□□□□ 0.29
SDF4-203ENST00000403997 FAM161AQ3B820 660 aa16.89■□□□□ 0.29
SDF4-203ENST00000403997 CDCA7LQ96GN5 454 aa16.89■□□□□ 0.29
SDF4-203ENST00000403997 MRPL50Q8N5N7 158 aaKnown RBP16.88■□□□□ 0.29
SDF4-203ENST00000403997 DPF2Q92785 391 aa16.88■□□□□ 0.29
SDF4-203ENST00000403997 MPHOSPH8Q99549 860 aa16.88■□□□□ 0.29
SDF4-203ENST00000403997 C9orf78Q9NZ63 289 aaPredicted RBP16.88■□□□□ 0.29
SDF4-203ENST00000403997 MKRN1Q9UHC7 482 aaKnown RBP16.88■□□□□ 0.29
SDF4-203ENST00000403997 SHTN1A0MZ66 631 aa16.87■□□□□ 0.29
SDF4-203ENST00000403997 ANKRD18BA2A2Z9 1011 aa16.87■□□□□ 0.29
SDF4-203ENST00000403997 GRM8O00222 908 aa16.87■□□□□ 0.29
SDF4-203ENST00000403997 MICALL2Q8IY33 904 aa16.87■□□□□ 0.29
SDF4-203ENST00000403997 SRCIN1Q9C0H9 1055 aa16.87■□□□□ 0.29
SDF4-203ENST00000403997 CHMP3Q9Y3E7 222 aa16.87■□□□□ 0.29
SDF4-203ENST00000403997 ADAMTSL1Q8N6G6 1762 aa16.87■□□□□ 0.29
SDF4-203ENST00000403997 MYH3P11055 1940 aa16.86■□□□□ 0.29
SDF4-203ENST00000403997 WTIPA6NIX2 430 aaPredicted RBP16.86■□□□□ 0.29
SDF4-203ENST00000403997 ALDH1L1O75891 902 aa16.86■□□□□ 0.29
SDF4-203ENST00000403997 VIL1P09327 827 aaKnown RBP16.86■□□□□ 0.29
SDF4-203ENST00000403997 CCT4P50991 539 aaKnown RBP16.86■□□□□ 0.29
SDF4-203ENST00000403997 FOXO4P98177 505 aa16.86■□□□□ 0.29
SDF4-203ENST00000403997 RPS12P25398 132 aaKnown RBP16.85■□□□□ 0.29
SDF4-203ENST00000403997 HIRAP54198 1017 aaPredicted RBP16.85■□□□□ 0.29
SDF4-203ENST00000403997 FMR1Q06787 632 aaKnown RBP eCLIP16.85■□□□□ 0.29
SDF4-203ENST00000403997 IFIT5Q13325 482 aaKnown RBP16.85■□□□□ 0.29
SDF4-203ENST00000403997 LMBR1LQ6UX01 489 aa16.85■□□□□ 0.29
SDF4-203ENST00000403997 TRPM4Q8TD43 1214 aa16.85■□□□□ 0.29
SDF4-203ENST00000403997 SSH1Q8WYL5 1049 aa16.85■□□□□ 0.29
SDF4-203ENST00000403997 ANKRD2Q9GZV1 360 aa16.85■□□□□ 0.29
SDF4-203ENST00000403997 LEMD3Q9Y2U8 911 aa16.85■□□□□ 0.29
SDF4-203ENST00000403997 TRAF5O00463 557 aa16.84■□□□□ 0.29
SDF4-203ENST00000403997 RBM26Q5T8P6 1007 aaKnown RBP16.84■□□□□ 0.29
SDF4-203ENST00000403997 SAMD7Q7Z3H4 446 aa16.84■□□□□ 0.29
SDF4-203ENST00000403997 ZC3H15Q8WU90 426 aaKnown RBP16.84■□□□□ 0.29
SDF4-203ENST00000403997 PGAP2Q9UHJ9 254 aa16.84■□□□□ 0.29
SDF4-203ENST00000403997 PTPRCP08575 1304 aa16.83■□□□□ 0.28
SDF4-203ENST00000403997 CCDC57Q2TAC2 916 aa16.83■□□□□ 0.28
SDF4-203ENST00000403997 TBC1D10BQ4KMP7 808 aaPredicted RBP16.83■□□□□ 0.28
SDF4-203ENST00000403997 EPHA10Q5JZY3 1008 aa16.83■□□□□ 0.28
SDF4-203ENST00000403997 PODNQ7Z5L7 613 aa16.83■□□□□ 0.28
SDF4-203ENST00000403997 TRMT2AQ8IZ69 625 aaKnown RBP16.83■□□□□ 0.28
SDF4-203ENST00000403997 ABT1Q9ULW3 272 aaKnown RBP16.83■□□□□ 0.28
SDF4-203ENST00000403997 CNTNAP1P78357 1384 aa16.82■□□□□ 0.28
SDF4-203ENST00000403997 ZNF804BA4D1E1 1349 aa16.82■□□□□ 0.28
SDF4-203ENST00000403997 USP17L3A6NCW0 530 aa16.82■□□□□ 0.28
SDF4-203ENST00000403997 USP17L4A6NCW7 530 aa16.82■□□□□ 0.28
SDF4-203ENST00000403997 KCNJ4P48050 445 aa16.82■□□□□ 0.28
SDF4-203ENST00000403997 CHRNDQ07001 517 aa16.82■□□□□ 0.28
SDF4-203ENST00000403997 DEFB115Q30KQ5 88 aa16.82■□□□□ 0.28
SDF4-203ENST00000403997 TAF7LQ5H9L4 462 aa16.82■□□□□ 0.28
SDF4-203ENST00000403997 RSBN1LQ6PCB5 846 aaPredicted RBP16.82■□□□□ 0.28
SDF4-203ENST00000403997 USP17L1Q7RTZ2 530 aa16.82■□□□□ 0.28
SDF4-203ENST00000403997 GLIS2Q9BZE0 524 aaPredicted RBP16.82■□□□□ 0.28
SDF4-203ENST00000403997 MED23Q9ULK4 1368 aa16.81■□□□□ 0.28
SDF4-203ENST00000403997 ALDH1L2Q3SY69 923 aa16.81■□□□□ 0.28
SDF4-203ENST00000403997 CST9Q5W186 159 aa16.81■□□□□ 0.28
SDF4-203ENST00000403997 DIEXFQ68CQ4 756 aaKnown RBP16.81■□□□□ 0.28
SDF4-203ENST00000403997 CDC37L1Q7L3B6 337 aa16.81■□□□□ 0.28
SDF4-203ENST00000403997 COA1Q9GZY4 146 aa16.81■□□□□ 0.28
SDF4-203ENST00000403997 SMC4Q9NTJ3 1288 aa16.81■□□□□ 0.28
SDF4-203ENST00000403997 SPEF2Q9C093 1822 aa16.8■□□□□ 0.28
SDF4-203ENST00000403997 EGFRP00533 1210 aa16.8■□□□□ 0.28
SDF4-203ENST00000403997 NBPF7P0C2Y1 421 aaPredicted RBP16.8■□□□□ 0.28
SDF4-203ENST00000403997 VEGFBP49765 207 aa16.8■□□□□ 0.28
SDF4-203ENST00000403997 LDHAL6AQ6ZMR3 332 aa16.8■□□□□ 0.28
SDF4-203ENST00000403997 TXNRD3Q86VQ6 643 aa16.8■□□□□ 0.28
SDF4-203ENST00000403997 MIER1Q8N108 512 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms