RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 NSFL1CQ9UNZ2 370 aaKnown RBP15.69■□□□□ 0.1
SPTLC1P3-201ENST00000403408 SF3B3Q15393 1217 aaKnown RBP15.68■□□□□ 0.1
SPTLC1P3-201ENST00000403408 CTU1Q7Z7A3 348 aaKnown RBP15.68■□□□□ 0.1
SPTLC1P3-201ENST00000403408 FAM89AQ96GI7 184 aa15.68■□□□□ 0.1
SPTLC1P3-201ENST00000403408 ISCA1Q9BUE6 129 aa15.68■□□□□ 0.1
SPTLC1P3-201ENST00000403408 SCAF8Q9UPN6 1271 aaKnown RBP15.68■□□□□ 0.1
SPTLC1P3-201ENST00000403408 VIL1P09327 827 aaKnown RBP15.67■□□□□ 0.1
SPTLC1P3-201ENST00000403408 KIF4BQ2VIQ3 1234 aa15.67■□□□□ 0.1
SPTLC1P3-201ENST00000403408 HSP90AB3PQ58FF7 597 aa15.67■□□□□ 0.1
SPTLC1P3-201ENST00000403408 TBC1D16Q8TBP0 767 aa15.67■□□□□ 0.1
SPTLC1P3-201ENST00000403408 DCPSQ96C86 337 aaKnown RBP15.67■□□□□ 0.1
SPTLC1P3-201ENST00000403408 HPS5Q9UPZ3 1129 aa15.67■□□□□ 0.1
SPTLC1P3-201ENST00000403408 ATP5J2-PTCD1G3V325 749 aa15.66■□□□□ 0.1
SPTLC1P3-201ENST00000403408 C6orf229H3BNL8 230 aa15.66■□□□□ 0.1
SPTLC1P3-201ENST00000403408 RPS12P25398 132 aaKnown RBP15.66■□□□□ 0.1
SPTLC1P3-201ENST00000403408 PRPF38BQ5VTL8 546 aaKnown RBP15.66■□□□□ 0.1
SPTLC1P3-201ENST00000403408 TMC4Q7Z404 712 aa15.66■□□□□ 0.1
SPTLC1P3-201ENST00000403408 WTIPA6NIX2 430 aaPredicted RBP15.65■□□□□ 0.1
SPTLC1P3-201ENST00000403408 RIPK4P57078 832 aa15.65■□□□□ 0.1
SPTLC1P3-201ENST00000403408 RTL5Q5HYW3 569 aaPredicted RBP15.65■□□□□ 0.1
SPTLC1P3-201ENST00000403408 CHPF2Q9P2E5 772 aa15.65■□□□□ 0.1
SPTLC1P3-201ENST00000403408 ZNF280AP59817 542 aaPredicted RBP15.64■□□□□ 0.09
SPTLC1P3-201ENST00000403408 SCARF1Q14162 830 aa15.64■□□□□ 0.09
SPTLC1P3-201ENST00000403408 ANGEL2Q5VTE6 544 aaKnown RBP15.64■□□□□ 0.09
SPTLC1P3-201ENST00000403408 GMLQ99445 158 aa15.64■□□□□ 0.09
SPTLC1P3-201ENST00000403408 SEC31BQ9NQW1 1179 aa15.64■□□□□ 0.09
SPTLC1P3-201ENST00000403408 PSME4Q14997 1843 aa15.64■□□□□ 0.09
SPTLC1P3-201ENST00000403408 SZT2Q5T011 3432 aa15.64■□□□□ 0.09
SPTLC1P3-201ENST00000403408 KIAA0100Q14667 2235 aaKnown RBP15.63■□□□□ 0.09
SPTLC1P3-201ENST00000403408 TBC1D8O95759 1140 aa15.63■□□□□ 0.09
SPTLC1P3-201ENST00000403408 PRAMEF18Q5VWM3 479 aa15.63■□□□□ 0.09
SPTLC1P3-201ENST00000403408 R3HDMLQ9H3Y0 253 aa15.63■□□□□ 0.09
SPTLC1P3-201ENST00000403408 CEP290O15078 2479 aa15.63■□□□□ 0.09
SPTLC1P3-201ENST00000403408 PAPPA2Q9BXP8 1791 aa15.62■□□□□ 0.09
SPTLC1P3-201ENST00000403408 CHL1O00533 1208 aa15.62■□□□□ 0.09
SPTLC1P3-201ENST00000403408 NEFMP07197 916 aa15.62■□□□□ 0.09
SPTLC1P3-201ENST00000403408 TMPOP42166 694 aaKnown RBP15.62■□□□□ 0.09
SPTLC1P3-201ENST00000403408 SULF1Q8IWU6 871 aa15.62■□□□□ 0.09
SPTLC1P3-201ENST00000403408 PLBD2Q8NHP8 589 aa15.62■□□□□ 0.09
SPTLC1P3-201ENST00000403408 ZNF296Q8WUU4 475 aaPredicted RBP15.62■□□□□ 0.09
SPTLC1P3-201ENST00000403408 BABAM1Q9NWV8 329 aa15.62■□□□□ 0.09
SPTLC1P3-201ENST00000403408 PODXL2Q9NZ53 605 aa15.62■□□□□ 0.09
SPTLC1P3-201ENST00000403408 ZNF646O15015 1829 aaPredicted RBP15.61■□□□□ 0.09
SPTLC1P3-201ENST00000403408 ZNF609O15014 1411 aa15.61■□□□□ 0.09
SPTLC1P3-201ENST00000403408 UBE2Q2LH0YL09 131 aa15.61■□□□□ 0.09
SPTLC1P3-201ENST00000403408 RPS8P62241 208 aaKnown RBP15.61■□□□□ 0.09
SPTLC1P3-201ENST00000403408 RSBN1LQ6PCB5 846 aaPredicted RBP15.61■□□□□ 0.09
SPTLC1P3-201ENST00000403408 MAPK8IP3Q9UPT6 1336 aa15.61■□□□□ 0.09
SPTLC1P3-201ENST00000403408 IRS4O14654 1257 aaPredicted RBP15.6■□□□□ 0.09
SPTLC1P3-201ENST00000403408 ANKRD13DQ6ZTN6 518 aa15.6■□□□□ 0.09
SPTLC1P3-201ENST00000403408 EYA3Q99504 573 aa15.6■□□□□ 0.09
SPTLC1P3-201ENST00000403408 UFL1O94874 794 aa15.59■□□□□ 0.09
SPTLC1P3-201ENST00000403408 JARID2Q92833 1246 aaPredicted RBP15.59■□□□□ 0.09
SPTLC1P3-201ENST00000403408 MXD3Q9BW11 206 aa15.59■□□□□ 0.09
SPTLC1P3-201ENST00000403408 ZC3H12CQ9C0D7 883 aaKnown RBP15.59■□□□□ 0.09
SPTLC1P3-201ENST00000403408 TRIM35Q9UPQ4 493 aa15.59■□□□□ 0.09
SPTLC1P3-201ENST00000403408 TRIM28Q13263 835 aaKnown RBP15.58■□□□□ 0.08
SPTLC1P3-201ENST00000403408 MYOZ2Q9NPC6 264 aa15.58■□□□□ 0.08
SPTLC1P3-201ENST00000403408 GPR25O00155 361 aa15.57■□□□□ 0.08
SPTLC1P3-201ENST00000403408 TM4SF4P48230 202 aa15.57■□□□□ 0.08
SPTLC1P3-201ENST00000403408 MKRN3Q13064 507 aaKnown RBP15.57■□□□□ 0.08
SPTLC1P3-201ENST00000403408 NBPF9Q3BBW0 867 aa15.57■□□□□ 0.08
SPTLC1P3-201ENST00000403408 HDGFL1Q5TGJ6 251 aa15.57■□□□□ 0.08
SPTLC1P3-201ENST00000403408 AGBL3Q8NEM8 1001 aa15.57■□□□□ 0.08
SPTLC1P3-201ENST00000403408 RANBP2P49792 3224 aaKnown RBP15.56■□□□□ 0.08
SPTLC1P3-201ENST00000403408 FKBP1BP68106 108 aa15.56■□□□□ 0.08
SPTLC1P3-201ENST00000403408 CCDC85AQ96PX6 553 aaPredicted RBP15.56■□□□□ 0.08
SPTLC1P3-201ENST00000403408 GGA1Q9UJY5 639 aa15.56■□□□□ 0.08
SPTLC1P3-201ENST00000403408 PITPNM2Q9BZ72 1349 aa15.55■□□□□ 0.08
SPTLC1P3-201ENST00000403408 USP17L8P0C7I0 530 aa15.55■□□□□ 0.08
SPTLC1P3-201ENST00000403408 HOXD11P31277 338 aaPredicted RBP15.55■□□□□ 0.08
SPTLC1P3-201ENST00000403408 NEUROD2Q15784 382 aa15.55■□□□□ 0.08
SPTLC1P3-201ENST00000403408 CCDC146Q8IYE0 955 aa15.55■□□□□ 0.08
SPTLC1P3-201ENST00000403408 REM2Q8IYK8 340 aaPredicted RBP15.55■□□□□ 0.08
SPTLC1P3-201ENST00000403408 ANKIB1Q9P2G1 1089 aa15.55■□□□□ 0.08
SPTLC1P3-201ENST00000403408 HDAC9Q9UKV0 1011 aa15.55■□□□□ 0.08
SPTLC1P3-201ENST00000403408 PKN2Q16513 984 aaKnown RBP15.54■□□□□ 0.08
SPTLC1P3-201ENST00000403408 ZBTB38Q8NAP3 1195 aaPredicted RBP15.54■□□□□ 0.08
SPTLC1P3-201ENST00000403408 PNNQ9H307 717 aaKnown RBP15.54■□□□□ 0.08
SPTLC1P3-201ENST00000403408 PHAXQ9H814 394 aaKnown RBP15.54■□□□□ 0.08
SPTLC1P3-201ENST00000403408 FZD1Q9UP38 647 aa15.54■□□□□ 0.08
SPTLC1P3-201ENST00000403408 LAS1LQ9Y4W2 734 aaKnown RBP15.54■□□□□ 0.08
SPTLC1P3-201ENST00000403408 TRIOBPQ9H2D6 2365 aa15.54■□□□□ 0.08
SPTLC1P3-201ENST00000403408 PTPN12Q05209 780 aaKnown RBP15.53■□□□□ 0.08
SPTLC1P3-201ENST00000403408 DACT2Q5SW24 774 aa15.53■□□□□ 0.08
SPTLC1P3-201ENST00000403408 FBXO46Q6PJ61 603 aaPredicted RBP15.53■□□□□ 0.08
SPTLC1P3-201ENST00000403408 DBF4Q9UBU7 674 aaPredicted RBP15.53■□□□□ 0.08
SPTLC1P3-201ENST00000403408 POTEFA5A3E0 1075 aa15.52■□□□□ 0.08
SPTLC1P3-201ENST00000403408 USP17L3A6NCW0 530 aa15.52■□□□□ 0.08
SPTLC1P3-201ENST00000403408 USP17L4A6NCW7 530 aa15.52■□□□□ 0.08
SPTLC1P3-201ENST00000403408 CAP1Q01518 475 aa15.52■□□□□ 0.08
SPTLC1P3-201ENST00000403408 NOM1Q5C9Z4 860 aaKnown RBP15.52■□□□□ 0.08
SPTLC1P3-201ENST00000403408 DUSP27Q5VZP5 1158 aa15.52■□□□□ 0.08
SPTLC1P3-201ENST00000403408 USP17L1Q7RTZ2 530 aa15.52■□□□□ 0.08
SPTLC1P3-201ENST00000403408 TXNRD3Q86VQ6 643 aa15.52■□□□□ 0.08
SPTLC1P3-201ENST00000403408 WNT10BO00744 389 aa15.51■□□□□ 0.07
SPTLC1P3-201ENST00000403408 HOXB7P09629 217 aa15.51■□□□□ 0.07
SPTLC1P3-201ENST00000403408 MYD88Q99836 296 aa15.51■□□□□ 0.07
SPTLC1P3-201ENST00000403408 CFHR5Q9BXR6 569 aa15.51■□□□□ 0.07
SPTLC1P3-201ENST00000403408 HYPKQ9NX55 129 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms