RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 SULF1Q8IWU6 871 aa6.98□□□□□ -1.29
HMGB3P7-201ENST00000400214 GPATCH11Q8N954 259 aa6.98□□□□□ -1.29
HMGB3P7-201ENST00000400214 GTF3C2Q8WUA4 911 aaPredicted RBP6.98□□□□□ -1.29
HMGB3P7-201ENST00000400214 TESK2Q96S53 571 aa6.98□□□□□ -1.29
HMGB3P7-201ENST00000400214 MRS2Q9HD23 443 aa6.98□□□□□ -1.29
HMGB3P7-201ENST00000400214 RGS17Q9UGC6 210 aaPredicted RBP6.98□□□□□ -1.29
HMGB3P7-201ENST00000400214 DNMT3AQ9Y6K1 912 aaPredicted RBP6.98□□□□□ -1.29
HMGB3P7-201ENST00000400214 ARHGEF10O15013 1369 aa6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 USP54Q70EL1 1684 aa6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 HMGB1P1B2RPK0 211 aaPredicted RBP6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 SH3BP5O60239 455 aa6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 S100BP04271 92 aaPredicted RBP6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 APLP1P51693 650 aa6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 TBX4P57082 545 aa6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 GUCA2AQ02747 115 aa6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 OCLNQ16625 522 aa6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 PPIP5K1Q6PFW1 1433 aa6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 NRKQ7Z2Y5 1582 aa6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 TMC7Q7Z402 723 aa6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 RNF135Q8IUD6 432 aa6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 FMNL3Q8IVF7 1028 aa6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 CCAR1Q8IX12 1150 aaKnown RBP6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 ZFRQ96KR1 1074 aaKnown RBP6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 SEPT3Q9UH03 358 aa6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 PNMA2Q9UL42 364 aa6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 NWD2Q9ULI1 1742 aa6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 ACEP12821 1306 aa6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 ATAD2Q6PL18 1390 aa6.96□□□□□ -1.29
HMGB3P7-201ENST00000400214 CPSF1Q10570 1443 aaKnown RBP6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 SSH2Q76I76 1423 aa6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 DNAJC6O75061 913 aa6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 FMNL1O95466 1100 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 FBXO45P0C2W1 286 aa6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 PTMSP20962 102 aa6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 FOXD4Q12950 439 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 PDE3BQ13370 1112 aa6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 LONRF3Q496Y0 759 aa6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 ZFYVE27Q5T4F4 411 aa6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 TYW1BQ6NUM6 668 aa6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 TSHZ1Q6ZSZ6 1077 aa6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 MCF2L2Q86YR7 1114 aa6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 NGDNQ8NEJ9 315 aaKnown RBP6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 HLA-CQ95604 372 aa6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 ZNF594Q96JF6 807 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 DUSP9Q99956 384 aaKnown RBP6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 VTI1BQ9UEU0 232 aa6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 INPP5FQ9Y2H2 1132 aa6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 PHRF1Q9P1Y6 1649 aaKnown RBP6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 PLCH1Q4KWH8 1693 aa6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 USP47Q96K76 1375 aa6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 ST20-MTHFSA0A0A6YYL1 179 aa6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 SORBS3O60504 671 aa6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 STK10O94804 968 aaKnown RBP6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 XRCC5P13010 732 aaKnown RBP6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 FKBP4Q02790 459 aaKnown RBP eCLIP6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 FMR1Q06787 632 aaKnown RBP eCLIP6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 KCNH2Q12809 1159 aa6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 MTMR2Q13614 643 aa6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 TMC4Q7Z404 712 aa6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 FAM9BQ8IZU0 186 aa6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 OGFOD1Q8N543 542 aa6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 MRFAP1L1Q96HT8 127 aa6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 PRKD2Q9BZL6 878 aa6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 SPC25Q9HBM1 224 aa6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 PIK3C2AO00443 1686 aa6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 COL14A1Q05707 1796 aaKnown RBP6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 USP6P35125 1406 aa6.94□□□□□ -1.3
HMGB3P7-201ENST00000400214 MYOM1P52179 1685 aa6.94□□□□□ -1.3
HMGB3P7-201ENST00000400214 CD163L1Q9NR16 1453 aa6.94□□□□□ -1.3
HMGB3P7-201ENST00000400214 ENPP3O14638 875 aa6.94□□□□□ -1.3
HMGB3P7-201ENST00000400214 COL9A1P20849 921 aa6.94□□□□□ -1.3
HMGB3P7-201ENST00000400214 CLDN10P78369 228 aa6.94□□□□□ -1.3
HMGB3P7-201ENST00000400214 C4orf46Q504U0 113 aa6.94□□□□□ -1.3
HMGB3P7-201ENST00000400214 ZNF772Q68DY9 489 aaPredicted RBP6.94□□□□□ -1.3
HMGB3P7-201ENST00000400214 ILDR2Q71H61 639 aa6.94□□□□□ -1.3
HMGB3P7-201ENST00000400214 JDP2Q8WYK2 163 aa6.94□□□□□ -1.3
HMGB3P7-201ENST00000400214 MAF1Q9H063 256 aa6.94□□□□□ -1.3
HMGB3P7-201ENST00000400214 CABP1Q9NZU7 370 aa6.94□□□□□ -1.3
HMGB3P7-201ENST00000400214 V9GY48 417 aaPredicted RBP6.94□□□□□ -1.3
HMGB3P7-201ENST00000400214 SLIT2O94813 1529 aa6.94□□□□□ -1.3
HMGB3P7-201ENST00000400214 NINLQ9Y2I6 1382 aa6.94□□□□□ -1.3
HMGB3P7-201ENST00000400214 NRAPQ86VF7 1730 aa6.93□□□□□ -1.3
HMGB3P7-201ENST00000400214 LDHBP07195 334 aaKnown RBP6.93□□□□□ -1.3
HMGB3P7-201ENST00000400214 DAB2P98082 770 aa6.93□□□□□ -1.3
HMGB3P7-201ENST00000400214 AMPD3Q01432 767 aa6.93□□□□□ -1.3
HMGB3P7-201ENST00000400214 BIRC2Q13490 618 aa6.93□□□□□ -1.3
HMGB3P7-201ENST00000400214 NFE2L2Q16236 605 aa6.93□□□□□ -1.3
HMGB3P7-201ENST00000400214 MEX3CQ5U5Q3 659 aaKnown RBP6.93□□□□□ -1.3
HMGB3P7-201ENST00000400214 POTEAQ6S8J7 498 aa6.93□□□□□ -1.3
HMGB3P7-201ENST00000400214 NAP1L5Q96NT1 182 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P7-201ENST00000400214 RPS6KC1Q96S38 1066 aa6.93□□□□□ -1.3
HMGB3P7-201ENST00000400214 AFF2P51816 1311 aa6.93□□□□□ -1.3
HMGB3P7-201ENST00000400214 BCL9LQ86UU0 1499 aa6.92□□□□□ -1.3
HMGB3P7-201ENST00000400214 CDK12Q9NYV4 1490 aaPredicted RBP6.92□□□□□ -1.3
HMGB3P7-201ENST00000400214 SLIT3O75094 1523 aa6.92□□□□□ -1.3
HMGB3P7-201ENST00000400214 K7ELQ4 463 aaPredicted RBP6.92□□□□□ -1.3
HMGB3P7-201ENST00000400214 TREHO43280 583 aa6.92□□□□□ -1.3
HMGB3P7-201ENST00000400214 PRC1O43663 620 aa6.92□□□□□ -1.3
HMGB3P7-201ENST00000400214 PRPF40AO75400 957 aaKnown RBP6.92□□□□□ -1.3
HMGB3P7-201ENST00000400214 DKK1O94907 266 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms