RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 BIRC2Q13490 618 aa11.38□□□□□ -0.59
PTPRM-203ENST00000400060 CCDC40Q4G0X9 1142 aa11.38□□□□□ -0.59
PTPRM-203ENST00000400060 BATF3Q9NR55 127 aa11.38□□□□□ -0.59
PTPRM-203ENST00000400060 LIG3P49916 1009 aa11.38□□□□□ -0.59
PTPRM-203ENST00000400060 SPAG1Q07617 926 aa11.38□□□□□ -0.59
PTPRM-203ENST00000400060 WASF1Q92558 559 aa11.38□□□□□ -0.59
PTPRM-203ENST00000400060 HYPKQ9NX55 129 aa11.38□□□□□ -0.59
PTPRM-203ENST00000400060 IFNKQ9P0W0 207 aa11.38□□□□□ -0.59
PTPRM-203ENST00000400060 DDIT3P35638 169 aa11.38□□□□□ -0.59
PTPRM-203ENST00000400060 KRT83P78385 493 aa11.38□□□□□ -0.59
PTPRM-203ENST00000400060 LONRF2Q1L5Z9 754 aa11.38□□□□□ -0.59
PTPRM-203ENST00000400060 SPATA24Q86W54 205 aa11.38□□□□□ -0.59
PTPRM-203ENST00000400060 PYM1Q9BRP8 204 aaKnown RBP11.38□□□□□ -0.59
PTPRM-203ENST00000400060 CAPS2Q9BXY5 557 aa11.38□□□□□ -0.59
PTPRM-203ENST00000400060 GOLGA6BA6NDN3 693 aa11.37□□□□□ -0.59
PTPRM-203ENST00000400060 KCNJ6P48051 423 aa11.37□□□□□ -0.59
PTPRM-203ENST00000400060 CUL4AQ13619 759 aa11.37□□□□□ -0.59
PTPRM-203ENST00000400060 TSNAXIP1Q2TAA8 658 aa11.37□□□□□ -0.59
PTPRM-203ENST00000400060 PPP1R13BQ96KQ4 1090 aa11.37□□□□□ -0.59
PTPRM-203ENST00000400060 TULP2O00295 520 aa11.37□□□□□ -0.59
PTPRM-203ENST00000400060 PDE1AP54750 535 aa11.37□□□□□ -0.59
PTPRM-203ENST00000400060 FAM160A1Q05DH4 1040 aa11.37□□□□□ -0.59
PTPRM-203ENST00000400060 TRIM14Q14142 442 aa11.37□□□□□ -0.59
PTPRM-203ENST00000400060 PRKAR2BP31323 418 aa11.37□□□□□ -0.59
PTPRM-203ENST00000400060 ARMC9Q7Z3E5 817 aa11.37□□□□□ -0.59
PTPRM-203ENST00000400060 ADAM21Q9UKJ8 722 aa11.37□□□□□ -0.59
PTPRM-203ENST00000400060 DNMT1P26358 1616 aaKnown RBP11.37□□□□□ -0.59
PTPRM-203ENST00000400060 RTL1A6NKG5 1358 aa11.37□□□□□ -0.59
PTPRM-203ENST00000400060 SMARCC2Q8TAQ2 1214 aa11.37□□□□□ -0.59
PTPRM-203ENST00000400060 MAATS1Q7Z4T9 603 aa11.36□□□□□ -0.59
PTPRM-203ENST00000400060 CNGA4Q8IV77 575 aa11.36□□□□□ -0.59
PTPRM-203ENST00000400060 TEX11Q8IYF3 940 aa11.36□□□□□ -0.59
PTPRM-203ENST00000400060 C1orf141Q5JVX7 400 aa11.36□□□□□ -0.59
PTPRM-203ENST00000400060 PRPF40BQ6NWY9 871 aaKnown RBP11.36□□□□□ -0.59
PTPRM-203ENST00000400060 CROCCP2Q86T23 111 aa11.36□□□□□ -0.59
PTPRM-203ENST00000400060 SAAL1Q96ER3 474 aa11.36□□□□□ -0.59
PTPRM-203ENST00000400060 PRAM1Q96QH2 718 aa11.36□□□□□ -0.59
PTPRM-203ENST00000400060 CYLC1P35663 651 aaPredicted RBP11.36□□□□□ -0.59
PTPRM-203ENST00000400060 E2F4Q16254 413 aa11.36□□□□□ -0.59
PTPRM-203ENST00000400060 TSGA10Q9BZW7 698 aa11.36□□□□□ -0.59
PTPRM-203ENST00000400060 TULP1O00294 542 aaPredicted RBP11.36□□□□□ -0.59
PTPRM-203ENST00000400060 PHACTR2O75167 634 aa11.36□□□□□ -0.59
PTPRM-203ENST00000400060 MYCNP04198 464 aaPredicted RBP11.36□□□□□ -0.59
PTPRM-203ENST00000400060 DBN1Q16643 649 aa11.36□□□□□ -0.59
PTPRM-203ENST00000400060 NBPF9Q3BBW0 867 aa11.36□□□□□ -0.59
PTPRM-203ENST00000400060 CWC27Q6UX04 472 aaKnown RBP11.36□□□□□ -0.59
PTPRM-203ENST00000400060 IQCA1Q86XH1 822 aa11.36□□□□□ -0.59
PTPRM-203ENST00000400060 APLFQ8IW19 511 aaPredicted RBP11.36□□□□□ -0.59
PTPRM-203ENST00000400060 ZSWIM4Q9H7M6 989 aa11.36□□□□□ -0.59
PTPRM-203ENST00000400060 C9orf78Q9NZ63 289 aaPredicted RBP11.36□□□□□ -0.59
PTPRM-203ENST00000400060 TSPYL4Q9UJ04 414 aa11.36□□□□□ -0.59
PTPRM-203ENST00000400060 FAM69CQ0P6D2 419 aa11.35□□□□□ -0.59
PTPRM-203ENST00000400060 DRP2Q13474 957 aa11.35□□□□□ -0.59
PTPRM-203ENST00000400060 STAG1Q8WVM7 1258 aa11.35□□□□□ -0.59
PTPRM-203ENST00000400060 PDE11AQ9HCR9 933 aa11.35□□□□□ -0.59
PTPRM-203ENST00000400060 GCFC2P16383 781 aaKnown RBP11.35□□□□□ -0.59
PTPRM-203ENST00000400060 FOSBP53539 338 aa11.35□□□□□ -0.59
PTPRM-203ENST00000400060 STK3Q13188 491 aa11.35□□□□□ -0.59
PTPRM-203ENST00000400060 SPECC1Q5M775 1068 aa11.35□□□□□ -0.59
PTPRM-203ENST00000400060 SRGAP1Q7Z6B7 1085 aa11.35□□□□□ -0.59
PTPRM-203ENST00000400060 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.35□□□□□ -0.59
PTPRM-203ENST00000400060 LUC7L2Q9Y383 392 aaKnown RBP11.35□□□□□ -0.59
PTPRM-203ENST00000400060 FAM135AQ9P2D6 1515 aa11.35□□□□□ -0.59
PTPRM-203ENST00000400060 CORO7P57737 925 aa11.35□□□□□ -0.59
PTPRM-203ENST00000400060 RBM6P78332 1123 aaKnown RBP11.35□□□□□ -0.59
PTPRM-203ENST00000400060 MYL5Q02045 173 aa11.35□□□□□ -0.59
PTPRM-203ENST00000400060 TTC14Q96N46 770 aa11.35□□□□□ -0.59
PTPRM-203ENST00000400060 TRIM7Q9C029 511 aa11.35□□□□□ -0.59
PTPRM-203ENST00000400060 SAMD15Q9P1V8 674 aa11.35□□□□□ -0.59
PTPRM-203ENST00000400060 SAMD9Q5K651 1589 aa11.35□□□□□ -0.59
PTPRM-203ENST00000400060 DDX58O95786 925 aaKnown RBP11.35□□□□□ -0.59
PTPRM-203ENST00000400060 RHOXF2BP0C7M4 288 aa11.35□□□□□ -0.59
PTPRM-203ENST00000400060 ZNF569Q5MCW4 686 aa11.35□□□□□ -0.59
PTPRM-203ENST00000400060 CFAP58Q5T655 872 aa11.35□□□□□ -0.59
PTPRM-203ENST00000400060 ANKRD24Q8TF21 1146 aa11.35□□□□□ -0.59
PTPRM-203ENST00000400060 CCDC51Q96ER9 411 aa11.35□□□□□ -0.59
PTPRM-203ENST00000400060 NUP88Q99567 741 aaPredicted RBP11.35□□□□□ -0.59
PTPRM-203ENST00000400060 RHOXF2Q9BQY4 288 aa11.35□□□□□ -0.59
PTPRM-203ENST00000400060 JPH2Q9BR39 696 aaPredicted RBP11.35□□□□□ -0.59
PTPRM-203ENST00000400060 PHAXQ9H814 394 aaKnown RBP11.35□□□□□ -0.59
PTPRM-203ENST00000400060 FAM204AQ9H8W3 233 aa11.35□□□□□ -0.59
PTPRM-203ENST00000400060 PUF60Q9UHX1 559 aaKnown RBP11.35□□□□□ -0.59
PTPRM-203ENST00000400060 U3KPZ7 1027 aaPredicted RBP11.35□□□□□ -0.59
PTPRM-203ENST00000400060 KRT86O43790 486 aa11.34□□□□□ -0.59
PTPRM-203ENST00000400060 CYP2E1P05181 493 aaPredicted RBP11.34□□□□□ -0.59
PTPRM-203ENST00000400060 NLRP5P59047 1200 aa11.34□□□□□ -0.59
PTPRM-203ENST00000400060 CC2D1AQ6P1N0 951 aaPredicted RBP11.34□□□□□ -0.59
PTPRM-203ENST00000400060 LRMPQ12912 555 aa11.34□□□□□ -0.59
PTPRM-203ENST00000400060 DYNC1I2Q13409 638 aaKnown RBP11.34□□□□□ -0.59
PTPRM-203ENST00000400060 LRRC23Q53EV4 343 aaPredicted RBP11.34□□□□□ -0.59
PTPRM-203ENST00000400060 GIGYF1O75420 1035 aaPredicted RBP11.34□□□□□ -0.59
PTPRM-203ENST00000400060 SEPT14Q6ZU15 432 aa11.34□□□□□ -0.59
PTPRM-203ENST00000400060 MYO1AQ9UBC5 1043 aa11.34□□□□□ -0.59
PTPRM-203ENST00000400060 ADGRL1O94910 1474 aa11.34□□□□□ -0.59
PTPRM-203ENST00000400060 GNGT1P63211 74 aa11.34□□□□□ -0.59
PTPRM-203ENST00000400060 TRAF1Q13077 416 aa11.34□□□□□ -0.59
PTPRM-203ENST00000400060 SART3Q15020 963 aaKnown RBP11.34□□□□□ -0.59
PTPRM-203ENST00000400060 C6orf163Q5TEZ5 329 aa11.34□□□□□ -0.59
PTPRM-203ENST00000400060 CCDC102BQ68D86 513 aa11.34□□□□□ -0.59
PTPRM-203ENST00000400060 MRPL50Q8N5N7 158 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms