RNA–Protein interactions for RNA: ENST00000399448.5

PTPN6-202, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN6, Length 2,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-202ENST00000399448 CDC37L1Q7L3B6 337 aa16.26■□□□□ 0.19
PTPN6-202ENST00000399448 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.26■□□□□ 0.19
PTPN6-202ENST00000399448 NAP1L5Q96NT1 182 aaPredicted RBP16.26■□□□□ 0.19
PTPN6-202ENST00000399448 DSCC1Q9BVC3 393 aa16.26■□□□□ 0.19
PTPN6-202ENST00000399448 FBXO3Q9UK99 471 aa16.26■□□□□ 0.19
PTPN6-202ENST00000399448 A0A1B0GUL7 405 aa16.25■□□□□ 0.19
PTPN6-202ENST00000399448 IFIT1P09914 478 aaKnown RBP16.25■□□□□ 0.19
PTPN6-202ENST00000399448 Q6ZUG5 572 aa16.25■□□□□ 0.19
PTPN6-202ENST00000399448 VSIG10Q8N0Z9 540 aa16.25■□□□□ 0.19
PTPN6-202ENST00000399448 GTF3C6Q969F1 213 aa16.25■□□□□ 0.19
PTPN6-202ENST00000399448 CEP126Q9P2H0 1117 aa16.25■□□□□ 0.19
PTPN6-202ENST00000399448 CCDC39Q9UFE4 941 aa16.25■□□□□ 0.19
PTPN6-202ENST00000399448 STK3Q13188 491 aa16.24■□□□□ 0.19
PTPN6-202ENST00000399448 CCDC57Q2TAC2 916 aa16.24■□□□□ 0.19
PTPN6-202ENST00000399448 ABCA3Q99758 1704 aa16.24■□□□□ 0.19
PTPN6-202ENST00000399448 ELP1O95163 1332 aa16.24■□□□□ 0.19
PTPN6-202ENST00000399448 MCM5P33992 734 aa16.24■□□□□ 0.19
PTPN6-202ENST00000399448 PUS3Q9BZE2 481 aaKnown RBP16.24■□□□□ 0.19
PTPN6-202ENST00000399448 RNF113AO15541 343 aaKnown RBP16.23■□□□□ 0.19
PTPN6-202ENST00000399448 TPRNQ4KMQ1 711 aa16.23■□□□□ 0.19
PTPN6-202ENST00000399448 KIF6Q6ZMV9 814 aa16.23■□□□□ 0.19
PTPN6-202ENST00000399448 PCCAP05165 728 aaPredicted RBP16.23■□□□□ 0.19
PTPN6-202ENST00000399448 DHX32Q7L7V1 743 aaKnown RBP16.23■□□□□ 0.19
PTPN6-202ENST00000399448 TTC6Q86TZ1 520 aa16.23■□□□□ 0.19
PTPN6-202ENST00000399448 FERMT3Q86UX7 667 aa16.23■□□□□ 0.19
PTPN6-202ENST00000399448 PLA2G12BQ9BX93 195 aa16.23■□□□□ 0.19
PTPN6-202ENST00000399448 AKAP2Q9Y2D5 859 aa16.23■□□□□ 0.19
PTPN6-202ENST00000399448 ZNF335Q9H4Z2 1342 aaPredicted RBP16.22■□□□□ 0.19
PTPN6-202ENST00000399448 HSP90B1P14625 803 aaKnown RBP16.22■□□□□ 0.19
PTPN6-202ENST00000399448 STOX1Q6ZVD7 989 aa16.22■□□□□ 0.19
PTPN6-202ENST00000399448 DNAJC10Q8IXB1 793 aa16.22■□□□□ 0.19
PTPN6-202ENST00000399448 PIGBQ92521 554 aa16.22■□□□□ 0.19
PTPN6-202ENST00000399448 SCAND2PQ9GZW5 306 aaPredicted RBP16.22■□□□□ 0.19
PTPN6-202ENST00000399448 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.22■□□□□ 0.19
PTPN6-202ENST00000399448 ZKSCAN5Q9Y2L8 839 aa16.22■□□□□ 0.19
PTPN6-202ENST00000399448 ZNF500O60304 480 aaPredicted RBP16.21■□□□□ 0.19
PTPN6-202ENST00000399448 STARD3NLO95772 234 aa16.21■□□□□ 0.19
PTPN6-202ENST00000399448 LRRFIP1Q32MZ4 808 aaKnown RBP16.21■□□□□ 0.19
PTPN6-202ENST00000399448 CCDC158Q5M9N0 1113 aa16.21■□□□□ 0.19
PTPN6-202ENST00000399448 LLPHQ9BRT6 129 aaKnown RBP16.21■□□□□ 0.19
PTPN6-202ENST00000399448 FUCA2Q9BTY2 467 aa16.21■□□□□ 0.19
PTPN6-202ENST00000399448 ASAP1Q9ULH1 1129 aa16.21■□□□□ 0.19
PTPN6-202ENST00000399448 STRCQ7RTU9 1775 aa16.21■□□□□ 0.19
PTPN6-202ENST00000399448 SPEF2Q9C093 1822 aa16.21■□□□□ 0.19
PTPN6-202ENST00000399448 CSF1RP07333 972 aa16.21■□□□□ 0.19
PTPN6-202ENST00000399448 HSPD1P10809 573 aaKnown RBP16.21■□□□□ 0.19
PTPN6-202ENST00000399448 FGD1P98174 961 aa16.21■□□□□ 0.19
PTPN6-202ENST00000399448 SLFNL1Q499Z3 407 aa16.21■□□□□ 0.19
PTPN6-202ENST00000399448 ZBTB38Q8NAP3 1195 aaPredicted RBP16.21■□□□□ 0.19
PTPN6-202ENST00000399448 ZNF330Q9Y3S2 320 aaPredicted RBP16.21■□□□□ 0.19
PTPN6-202ENST00000399448 TOGARAM1Q9Y4F4 1720 aa16.2■□□□□ 0.18
PTPN6-202ENST00000399448 JAK2O60674 1132 aa16.2■□□□□ 0.18
PTPN6-202ENST00000399448 PFKFB2O60825 505 aa16.2■□□□□ 0.18
PTPN6-202ENST00000399448 GIMAP6Q6P9H5 292 aa16.2■□□□□ 0.18
PTPN6-202ENST00000399448 BRF1Q92994 677 aa16.2■□□□□ 0.18
PTPN6-202ENST00000399448 OFD1O75665 1012 aa16.2■□□□□ 0.18
PTPN6-202ENST00000399448 EXOSC10Q01780 885 aaKnown RBP16.2■□□□□ 0.18
PTPN6-202ENST00000399448 FAM173BQ6P4H8 233 aa16.2■□□□□ 0.18
PTPN6-202ENST00000399448 MAST3O60307 1309 aa16.19■□□□□ 0.18
PTPN6-202ENST00000399448 HCLS1P14317 486 aaPredicted RBP16.19■□□□□ 0.18
PTPN6-202ENST00000399448 SCRN1Q12765 414 aa16.19■□□□□ 0.18
PTPN6-202ENST00000399448 TTC39AQ5SRH9 613 aa16.19■□□□□ 0.18
PTPN6-202ENST00000399448 GORABQ5T7V8 394 aa16.19■□□□□ 0.18
PTPN6-202ENST00000399448 SMARCC2Q8TAQ2 1214 aa16.19■□□□□ 0.18
PTPN6-202ENST00000399448 FAM89AQ96GI7 184 aa16.19■□□□□ 0.18
PTPN6-202ENST00000399448 XAGE2Q96GT9 111 aa16.19■□□□□ 0.18
PTPN6-202ENST00000399448 AGXT2Q9BYV1 514 aa16.19■□□□□ 0.18
PTPN6-202ENST00000399448 MAP3K15Q6ZN16 1313 aa16.19■□□□□ 0.18
PTPN6-202ENST00000399448 ZFYP08048 801 aaPredicted RBP16.19■□□□□ 0.18
PTPN6-202ENST00000399448 FKBP4Q02790 459 aaKnown RBP eCLIP16.19■□□□□ 0.18
PTPN6-202ENST00000399448 IFIT5Q13325 482 aaKnown RBP16.19■□□□□ 0.18
PTPN6-202ENST00000399448 TAF7LQ5H9L4 462 aa16.19■□□□□ 0.18
PTPN6-202ENST00000399448 GIGYF2Q6Y7W6 1299 aaKnown RBP16.19■□□□□ 0.18
PTPN6-202ENST00000399448 SPATA32Q96LK8 384 aa16.19■□□□□ 0.18
PTPN6-202ENST00000399448 LRRC2Q9BYS8 371 aa16.19■□□□□ 0.18
PTPN6-202ENST00000399448 E7EWF7 191 aa16.18■□□□□ 0.18
PTPN6-202ENST00000399448 ZSCAN16Q9H4T2 348 aaPredicted RBP16.18■□□□□ 0.18
PTPN6-202ENST00000399448 TFIP11Q9UBB9 837 aaKnown RBP16.18■□□□□ 0.18
PTPN6-202ENST00000399448 H3BQV1 296 aa16.17■□□□□ 0.18
PTPN6-202ENST00000399448 M0R2C6 588 aa16.17■□□□□ 0.18
PTPN6-202ENST00000399448 PTMAP06454 111 aaKnown RBP16.17■□□□□ 0.18
PTPN6-202ENST00000399448 ADORA1P30542 326 aa16.17■□□□□ 0.18
PTPN6-202ENST00000399448 RESTQ13127 1097 aa16.17■□□□□ 0.18
PTPN6-202ENST00000399448 IFFO2Q5TF58 517 aa16.17■□□□□ 0.18
PTPN6-202ENST00000399448 LEO1Q8WVC0 666 aaPredicted RBP16.17■□□□□ 0.18
PTPN6-202ENST00000399448 CDHR2Q9BYE9 1310 aa16.17■□□□□ 0.18
PTPN6-202ENST00000399448 GOLGA6L4A6NEF3 574 aa16.17■□□□□ 0.18
PTPN6-202ENST00000399448 HSP90AB3PQ58FF7 597 aa16.17■□□□□ 0.18
PTPN6-202ENST00000399448 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.17■□□□□ 0.18
PTPN6-202ENST00000399448 OSBP2Q969R2 916 aa16.17■□□□□ 0.18
PTPN6-202ENST00000399448 CHMP4CQ96CF2 233 aa16.17■□□□□ 0.18
PTPN6-202ENST00000399448 BTG4Q9NY30 223 aa16.17■□□□□ 0.18
PTPN6-202ENST00000399448 CTNNA3Q9UI47 895 aa16.17■□□□□ 0.18
PTPN6-202ENST00000399448 NHSL1Q5SYE7 1610 aa16.16■□□□□ 0.18
PTPN6-202ENST00000399448 KDM4AO75164 1064 aa16.16■□□□□ 0.18
PTPN6-202ENST00000399448 CCDC192P0DO97 292 aa16.16■□□□□ 0.18
PTPN6-202ENST00000399448 HMGN5P82970 282 aaKnown RBP16.16■□□□□ 0.18
PTPN6-202ENST00000399448 NSUN7Q8NE18 718 aaKnown RBP16.16■□□□□ 0.18
PTPN6-202ENST00000399448 DDX11Q96FC9 970 aa16.16■□□□□ 0.18
PTPN6-202ENST00000399448 USP25Q9UHP3 1055 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms