RNA–Protein interactions for RNA: ENST00000398776.1

CAPN11-201, Transcript of calpain 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN11, Length 2,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11-201ENST00000398776 COPRSQ9NQ92 184 aa11.7□□□□□ -0.54
CAPN11-201ENST00000398776 CHMP3Q9Y3E7 222 aa11.7□□□□□ -0.54
CAPN11-201ENST00000398776 ZSCAN22P10073 491 aaPredicted RBP11.7□□□□□ -0.54
CAPN11-201ENST00000398776 SLFNL1Q499Z3 407 aa11.7□□□□□ -0.54
CAPN11-201ENST00000398776 FUCA2Q9BTY2 467 aa11.7□□□□□ -0.54
CAPN11-201ENST00000398776 GEMIN8Q9NWZ8 242 aaKnown RBP11.7□□□□□ -0.54
CAPN11-201ENST00000398776 NHSL1Q5SYE7 1610 aa11.7□□□□□ -0.54
CAPN11-201ENST00000398776 SHANK3Q9BYB0 1731 aa11.7□□□□□ -0.54
CAPN11-201ENST00000398776 MAP4K4O95819 1239 aaPredicted RBP11.69□□□□□ -0.54
CAPN11-201ENST00000398776 LRMPQ12912 555 aa11.69□□□□□ -0.54
CAPN11-201ENST00000398776 TOM1L2Q6ZVM7 507 aa11.69□□□□□ -0.54
CAPN11-201ENST00000398776 NUP188Q5SRE5 1749 aa11.69□□□□□ -0.54
CAPN11-201ENST00000398776 STX6O43752 255 aa11.69□□□□□ -0.54
CAPN11-201ENST00000398776 CCDC186Q7Z3E2 898 aa11.69□□□□□ -0.54
CAPN11-201ENST00000398776 KCNB2Q92953 911 aa11.69□□□□□ -0.54
CAPN11-201ENST00000398776 SECISBP2LQ93073 1101 aaKnown RBP11.69□□□□□ -0.54
CAPN11-201ENST00000398776 SNRKQ9NRH2 765 aa11.69□□□□□ -0.54
CAPN11-201ENST00000398776 RPAP1Q9BWH6 1393 aaPredicted RBP11.68□□□□□ -0.54
CAPN11-201ENST00000398776 TNNT1P13805 278 aa11.68□□□□□ -0.54
CAPN11-201ENST00000398776 IL2RBP14784 551 aa11.68□□□□□ -0.54
CAPN11-201ENST00000398776 SYT1P21579 422 aa11.68□□□□□ -0.54
CAPN11-201ENST00000398776 MAPK8IP2Q13387 824 aaPredicted RBP11.68□□□□□ -0.54
CAPN11-201ENST00000398776 ZNF592Q92610 1267 aa11.68□□□□□ -0.54
CAPN11-201ENST00000398776 EAF2Q96CJ1 260 aaPredicted RBP11.68□□□□□ -0.54
CAPN11-201ENST00000398776 SNX14Q9Y5W7 946 aa11.68□□□□□ -0.54
CAPN11-201ENST00000398776 KCPQ6ZWJ8 1503 aa11.68□□□□□ -0.54
CAPN11-201ENST00000398776 HNRNPH2P55795 449 aaKnown RBP11.68□□□□□ -0.54
CAPN11-201ENST00000398776 CWC27Q6UX04 472 aaKnown RBP11.68□□□□□ -0.54
CAPN11-201ENST00000398776 CCDC112Q8NEF3 446 aa11.68□□□□□ -0.54
CAPN11-201ENST00000398776 CCDC192P0DO97 292 aa11.67□□□□□ -0.54
CAPN11-201ENST00000398776 DNM1Q05193 864 aaKnown RBP11.67□□□□□ -0.54
CAPN11-201ENST00000398776 CAMK4Q16566 473 aa11.67□□□□□ -0.54
CAPN11-201ENST00000398776 KMT5BQ4FZB7 885 aa11.67□□□□□ -0.54
CAPN11-201ENST00000398776 TM6SF1Q9BZW5 370 aa11.67□□□□□ -0.54
CAPN11-201ENST00000398776 NRBP1Q9UHY1 535 aa11.67□□□□□ -0.54
CAPN11-201ENST00000398776 TNS2Q63HR2 1409 aa11.67□□□□□ -0.54
CAPN11-201ENST00000398776 RFX5P48382 616 aaPredicted RBP11.67□□□□□ -0.54
CAPN11-201ENST00000398776 LUZP1Q86V48 1076 aa11.67□□□□□ -0.54
CAPN11-201ENST00000398776 FBXO41Q8TF61 875 aa11.67□□□□□ -0.54
CAPN11-201ENST00000398776 TTC14Q96N46 770 aa11.67□□□□□ -0.54
CAPN11-201ENST00000398776 F13A1P00488 732 aa11.66□□□□□ -0.54
CAPN11-201ENST00000398776 CASP7P55210 303 aa11.66□□□□□ -0.54
CAPN11-201ENST00000398776 EPHA10Q5JZY3 1008 aa11.66□□□□□ -0.54
CAPN11-201ENST00000398776 ERICH4A6NGS2 130 aa11.66□□□□□ -0.54
CAPN11-201ENST00000398776 RBM6P78332 1123 aaKnown RBP11.66□□□□□ -0.54
CAPN11-201ENST00000398776 SMC3Q9UQE7 1217 aa11.66□□□□□ -0.54
CAPN11-201ENST00000398776 ATP6V1DQ9Y5K8 247 aa11.66□□□□□ -0.54
CAPN11-201ENST00000398776 RFX7Q2KHR2 1363 aa11.66□□□□□ -0.54
CAPN11-201ENST00000398776 A0A087WZG4 1122 aa11.66□□□□□ -0.54
CAPN11-201ENST00000398776 PTPN12Q05209 780 aaKnown RBP11.66□□□□□ -0.54
CAPN11-201ENST00000398776 TPD52L1Q16890 204 aaPredicted RBP11.66□□□□□ -0.54
CAPN11-201ENST00000398776 MUM1L1Q5H9M0 696 aa11.66□□□□□ -0.54
CAPN11-201ENST00000398776 TICAM2Q86XR7 235 aa11.66□□□□□ -0.54
CAPN11-201ENST00000398776 NOL10Q9BSC4 688 aaKnown RBP11.66□□□□□ -0.54
CAPN11-201ENST00000398776 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.66□□□□□ -0.54
CAPN11-201ENST00000398776 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.66□□□□□ -0.54
CAPN11-201ENST00000398776 V9GYY5 206 aaPredicted RBP11.66□□□□□ -0.54
CAPN11-201ENST00000398776 NBPF26B4DH59 902 aa11.65□□□□□ -0.54
CAPN11-201ENST00000398776 H7C1W4 665 aa11.65□□□□□ -0.54
CAPN11-201ENST00000398776 NBPF14Q5TI25 921 aa11.65□□□□□ -0.54
CAPN11-201ENST00000398776 RNF20Q5VTR2 975 aa11.65□□□□□ -0.54
CAPN11-201ENST00000398776 NBPF10Q6P3W6 841 aaKnown RBP11.65□□□□□ -0.54
CAPN11-201ENST00000398776 CTR9Q6PD62 1173 aa11.65□□□□□ -0.54
CAPN11-201ENST00000398776 UBE3BQ7Z3V4 1068 aa11.65□□□□□ -0.54
CAPN11-201ENST00000398776 NBPF15Q8N660 670 aa11.65□□□□□ -0.54
CAPN11-201ENST00000398776 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.65□□□□□ -0.54
CAPN11-201ENST00000398776 ZNF335Q9H4Z2 1342 aaPredicted RBP11.65□□□□□ -0.54
CAPN11-201ENST00000398776 ATP5JP18859 108 aa11.65□□□□□ -0.55
CAPN11-201ENST00000398776 RAD51AP2Q09MP3 1159 aa11.65□□□□□ -0.55
CAPN11-201ENST00000398776 TRIM5Q9C035 493 aa11.65□□□□□ -0.55
CAPN11-201ENST00000398776 CCDC8Q9H0W5 538 aaPredicted RBP11.65□□□□□ -0.55
CAPN11-201ENST00000398776 CCDC171Q6TFL3 1326 aa11.64□□□□□ -0.55
CAPN11-201ENST00000398776 NOP2P46087 812 aaKnown RBP11.64□□□□□ -0.55
CAPN11-201ENST00000398776 AK2P54819 239 aa11.64□□□□□ -0.55
CAPN11-201ENST00000398776 NECTIN1Q15223 517 aa11.64□□□□□ -0.55
CAPN11-201ENST00000398776 CERS3Q8IU89 383 aa11.64□□□□□ -0.55
CAPN11-201ENST00000398776 CKAP2LQ8IYA6 745 aa11.64□□□□□ -0.55
CAPN11-201ENST00000398776 RASEFQ8IZ41 740 aa11.64□□□□□ -0.55
CAPN11-201ENST00000398776 FAM200AQ8TCP9 573 aa11.64□□□□□ -0.55
CAPN11-201ENST00000398776 SIL1Q9H173 461 aa11.64□□□□□ -0.55
CAPN11-201ENST00000398776 LIMCH1Q9UPQ0 1083 aa11.64□□□□□ -0.55
CAPN11-201ENST00000398776 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.64□□□□□ -0.55
CAPN11-201ENST00000398776 TJP1Q07157 1748 aa11.64□□□□□ -0.55
CAPN11-201ENST00000398776 VPS37CA5D8V6 355 aaPredicted RBP11.64□□□□□ -0.55
CAPN11-201ENST00000398776 CPA1P15085 419 aa11.64□□□□□ -0.55
CAPN11-201ENST00000398776 BMS1Q14692 1282 aaKnown RBP11.64□□□□□ -0.55
CAPN11-201ENST00000398776 VPS53Q5VIR6 699 aa11.64□□□□□ -0.55
CAPN11-201ENST00000398776 CCDC191Q8NCU4 936 aa11.64□□□□□ -0.55
CAPN11-201ENST00000398776 MAP4K1Q92918 833 aa11.64□□□□□ -0.55
CAPN11-201ENST00000398776 JCADQ9P266 1359 aa11.63□□□□□ -0.55
CAPN11-201ENST00000398776 ZKSCAN1P17029 563 aaPredicted RBP11.63□□□□□ -0.55
CAPN11-201ENST00000398776 TNNI3KQ59H18 835 aa11.63□□□□□ -0.55
CAPN11-201ENST00000398776 ERO1AQ96HE7 468 aa11.63□□□□□ -0.55
CAPN11-201ENST00000398776 ZSWIM6Q9HCJ5 1215 aa11.63□□□□□ -0.55
CAPN11-201ENST00000398776 CWC25Q9NXE8 425 aaPredicted RBP11.63□□□□□ -0.55
CAPN11-201ENST00000398776 FPGT-TNNI3KV9GXZ4 949 aa11.63□□□□□ -0.55
CAPN11-201ENST00000398776 TOGARAM1Q9Y4F4 1720 aa11.63□□□□□ -0.55
CAPN11-201ENST00000398776 EVA1CP58658 441 aa11.63□□□□□ -0.55
CAPN11-201ENST00000398776 PTH1RQ03431 593 aa11.63□□□□□ -0.55
CAPN11-201ENST00000398776 ZSCAN25Q6NSZ9 544 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms