RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 LRP5O75197 1615 aa22.36■■□□□ 1.17
MBD1-208ENST00000398493 REC8O95072 547 aa22.36■■□□□ 1.17
MBD1-208ENST00000398493 RABL6Q3YEC7 729 aaPredicted RBP22.36■■□□□ 1.17
MBD1-208ENST00000398493 HSCBQ8IWL3 235 aa22.36■■□□□ 1.17
MBD1-208ENST00000398493 IL1RAPL2Q9NP60 686 aa22.36■■□□□ 1.17
MBD1-208ENST00000398493 H0YIN7 160 aa22.36■■□□□ 1.17
MBD1-208ENST00000398493 HSP90B1P14625 803 aaKnown RBP22.35■■□□□ 1.17
MBD1-208ENST00000398493 CLASRPQ8N2M8 674 aaKnown RBP22.34■■□□□ 1.17
MBD1-208ENST00000398493 ZNF622Q969S3 477 aaKnown RBP eCLIP22.34■■□□□ 1.175e-7■■■□□ 14.6
MBD1-208ENST00000398493 SNX21Q969T3 373 aa22.34■■□□□ 1.17
MBD1-208ENST00000398493 COL4A1P02462 1669 aa22.34■■□□□ 1.17
MBD1-208ENST00000398493 COL11A2P13942 1736 aaPredicted RBP22.34■■□□□ 1.17
MBD1-208ENST00000398493 KIAA1551Q9HCM1 1747 aa22.34■■□□□ 1.17
MBD1-208ENST00000398493 LAMB2P55268 1798 aa22.34■■□□□ 1.17
MBD1-208ENST00000398493 G3BP1Q13283 466 aaKnown RBP eCLIP22.34■■□□□ 1.17
MBD1-208ENST00000398493 CCDC152Q4G0S7 254 aa22.34■■□□□ 1.17
MBD1-208ENST00000398493 SLC51AQ86UW1 340 aa22.34■■□□□ 1.17
MBD1-208ENST00000398493 MASTLQ96GX5 879 aa22.34■■□□□ 1.17
MBD1-208ENST00000398493 CHMP3Q9Y3E7 222 aa22.34■■□□□ 1.17
MBD1-208ENST00000398493 TRIM6-TRIM34B2RNG4 842 aa22.33■■□□□ 1.16
MBD1-208ENST00000398493 ERC2O15083 957 aa22.33■■□□□ 1.16
MBD1-208ENST00000398493 NPR1P16066 1061 aa22.33■■□□□ 1.16
MBD1-208ENST00000398493 HOXA10P31260 410 aaPredicted RBP22.33■■□□□ 1.16
MBD1-208ENST00000398493 RPGRQ92834 1020 aaKnown RBP22.33■■□□□ 1.16
MBD1-208ENST00000398493 CELF1Q92879 486 aaKnown RBP22.33■■□□□ 1.16
MBD1-208ENST00000398493 ITGA6P23229 1130 aa22.31■■□□□ 1.16
MBD1-208ENST00000398493 RILPL2Q969X0 211 aa22.31■■□□□ 1.16
MBD1-208ENST00000398493 USP26Q9BXU7 913 aa22.31■■□□□ 1.16
MBD1-208ENST00000398493 RBM17Q96I25 401 aaKnown RBP22.31■■□□□ 1.16
MBD1-208ENST00000398493 GPATCH3Q96I76 525 aa22.31■■□□□ 1.16
MBD1-208ENST00000398493 STYK1Q6J9G0 422 aa22.3■■□□□ 1.16
MBD1-208ENST00000398493 DDX46Q7L014 1031 aaKnown RBP22.3■■□□□ 1.16
MBD1-208ENST00000398493 KLHDC4Q8TBB5 520 aa22.3■■□□□ 1.16
MBD1-208ENST00000398493 TTC41PQ6P2S7 1318 aa22.3■■□□□ 1.16
MBD1-208ENST00000398493 ZNF594Q96JF6 807 aaPredicted RBP22.29■■□□□ 1.16
MBD1-208ENST00000398493 TAF1P21675 1872 aa22.29■■□□□ 1.16
MBD1-208ENST00000398493 RFX5P48382 616 aaPredicted RBP22.29■■□□□ 1.16
MBD1-208ENST00000398493 TSHZ3Q63HK5 1081 aa22.29■■□□□ 1.16
MBD1-208ENST00000398493 CRAMP1Q96RY5 1269 aa22.29■■□□□ 1.16
MBD1-208ENST00000398493 MYH3P11055 1940 aa22.28■■□□□ 1.16
MBD1-208ENST00000398493 IFIT5Q13325 482 aaKnown RBP22.28■■□□□ 1.16
MBD1-208ENST00000398493 GRAPQ13588 217 aa22.28■■□□□ 1.16
MBD1-208ENST00000398493 GRAPLQ8TC17 118 aaPredicted RBP22.28■■□□□ 1.16
MBD1-208ENST00000398493 PIM2Q9P1W9 311 aa22.28■■□□□ 1.16
MBD1-208ENST00000398493 RTL9Q8NET4 1388 aa22.28■■□□□ 1.16
MBD1-208ENST00000398493 IFIT2P09913 472 aaKnown RBP22.27■■□□□ 1.16
MBD1-208ENST00000398493 CCDC57Q2TAC2 916 aa22.27■■□□□ 1.16
MBD1-208ENST00000398493 ANKRD18BA2A2Z9 1011 aa22.27■■□□□ 1.15
MBD1-208ENST00000398493 GLRX3O76003 335 aaKnown RBP22.27■■□□□ 1.15
MBD1-208ENST00000398493 ALDH1B1P30837 517 aa22.27■■□□□ 1.15
MBD1-208ENST00000398493 PRPF40BQ6NWY9 871 aaKnown RBP22.27■■□□□ 1.15
MBD1-208ENST00000398493 OLFM4Q6UX06 510 aa22.27■■□□□ 1.15
MBD1-208ENST00000398493 TTLL6Q8N841 843 aa22.27■■□□□ 1.15
MBD1-208ENST00000398493 KIF2CQ99661 725 aa22.27■■□□□ 1.15
MBD1-208ENST00000398493 PA2G4Q9UQ80 394 aaKnown RBP22.27■■□□□ 1.15
MBD1-208ENST00000398493 RPS8P62241 208 aaKnown RBP22.26■■□□□ 1.15
MBD1-208ENST00000398493 RABEP1Q15276 862 aa22.26■■□□□ 1.15
MBD1-208ENST00000398493 CNTROBQ8N137 903 aa22.26■■□□□ 1.15
MBD1-208ENST00000398493 CNKSR1Q969H4 720 aa22.26■■□□□ 1.15
MBD1-208ENST00000398493 CHMLP26374 656 aa22.25■■□□□ 1.15
MBD1-208ENST00000398493 PTPN12Q05209 780 aaKnown RBP22.25■■□□□ 1.15
MBD1-208ENST00000398493 ESYT1Q9BSJ8 1104 aa22.25■■□□□ 1.15
MBD1-208ENST00000398493 SLKQ9H2G2 1235 aaPredicted RBP22.25■■□□□ 1.15
MBD1-208ENST00000398493 ZNF219Q9P2Y4 722 aaPredicted RBP22.25■■□□□ 1.15
MBD1-208ENST00000398493 PI4K2BQ8TCG2 481 aa22.24■■□□□ 1.15
MBD1-208ENST00000398493 PUS3Q9BZE2 481 aaKnown RBP22.24■■□□□ 1.15
MBD1-208ENST00000398493 DALRD3Q5D0E6 543 aaKnown RBP22.24■■□□□ 1.15
MBD1-208ENST00000398493 ANKRD18AQ8IVF6 992 aa22.24■■□□□ 1.15
MBD1-208ENST00000398493 C7orf43Q8WVR3 580 aa22.24■■□□□ 1.15
MBD1-208ENST00000398493 ECHDC1Q9NTX5 307 aa22.24■■□□□ 1.15
MBD1-208ENST00000398493 BCS1LQ9Y276 419 aa22.24■■□□□ 1.15
MBD1-208ENST00000398493 DLEC1Q9Y238 1755 aa22.24■■□□□ 1.15
MBD1-208ENST00000398493 SLX4Q8IY92 1834 aa22.23■■□□□ 1.15
MBD1-208ENST00000398493 MCCP23508 829 aa22.23■■□□□ 1.15
MBD1-208ENST00000398493 NFKBIBQ15653 356 aa22.23■■□□□ 1.15
MBD1-208ENST00000398493 CDC5LQ99459 802 aaKnown RBP22.23■■□□□ 1.15
MBD1-208ENST00000398493 COPRSQ9NQ92 184 aa22.23■■□□□ 1.15
MBD1-208ENST00000398493 PPEF1O14829 653 aaPredicted RBP22.22■■□□□ 1.15
MBD1-208ENST00000398493 EPB41L2O43491 1005 aaKnown RBP22.22■■□□□ 1.15
MBD1-208ENST00000398493 BBOX1O75936 387 aa22.22■■□□□ 1.15
MBD1-208ENST00000398493 AACSQ86V21 672 aa22.22■■□□□ 1.15
MBD1-208ENST00000398493 C21orf2O43822 256 aa22.22■■□□□ 1.15
MBD1-208ENST00000398493 ANTXR1Q9H6X2 564 aa22.22■■□□□ 1.15
MBD1-208ENST00000398493 BRCA1P38398 1863 aaKnown RBP22.21■■□□□ 1.15
MBD1-208ENST00000398493 IGHMBP2P38935 993 aaKnown RBP22.21■■□□□ 1.15
MBD1-208ENST00000398493 LRRC24Q50LG9 513 aa22.21■■□□□ 1.15
MBD1-208ENST00000398493 TAF7LQ5H9L4 462 aa22.21■■□□□ 1.15
MBD1-208ENST00000398493 SIL1Q9H173 461 aa22.21■■□□□ 1.15
MBD1-208ENST00000398493 SASH1O94885 1247 aa22.2■■□□□ 1.14
MBD1-208ENST00000398493 BSDC1Q9NW68 430 aaPredicted RBP22.2■■□□□ 1.14
MBD1-208ENST00000398493 YBX3P16989 372 aaKnown RBP eCLIP22.2■■□□□ 1.14
MBD1-208ENST00000398493 LDHAL6AQ6ZMR3 332 aa22.2■■□□□ 1.14
MBD1-208ENST00000398493 MPHOSPH8Q99549 860 aa22.2■■□□□ 1.14
MBD1-208ENST00000398493 CHMP5Q9NZZ3 219 aa22.2■■□□□ 1.14
MBD1-208ENST00000398493 K7ELQ4 463 aaPredicted RBP22.19■■□□□ 1.14
MBD1-208ENST00000398493 ATP6V0A2Q9Y487 856 aa22.19■■□□□ 1.14
MBD1-208ENST00000398493 SP8Q8IXZ3 490 aa22.18■■□□□ 1.14
MBD1-208ENST00000398493 SPRYD3Q8NCJ5 442 aa22.18■■□□□ 1.14
MBD1-208ENST00000398493 MINPP1Q9UNW1 487 aa22.18■■□□□ 1.14
MBD1-208ENST00000398493 CACNA1SQ13698 1873 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms