RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 PRC1O43663 620 aa5.77□□□□□ -1.49
SMAD4-202ENST00000398417 TNNT1P13805 278 aa5.77□□□□□ -1.49
SMAD4-202ENST00000398417 CCDC82Q8N4S0 544 aa5.77□□□□□ -1.49
SMAD4-202ENST00000398417 PDILTQ8N807 584 aa5.77□□□□□ -1.49
SMAD4-202ENST00000398417 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.77□□□□□ -1.49
SMAD4-202ENST00000398417 ZNF165P49910 485 aa5.77□□□□□ -1.49
SMAD4-202ENST00000398417 DCAF5Q96JK2 942 aa5.77□□□□□ -1.49
SMAD4-202ENST00000398417 EYA2O00167 538 aa5.77□□□□□ -1.49
SMAD4-202ENST00000398417 ATP5JP18859 108 aa5.77□□□□□ -1.49
SMAD4-202ENST00000398417 ST3GAL1Q11201 340 aa5.77□□□□□ -1.49
SMAD4-202ENST00000398417 TOB2Q14106 344 aaPredicted RBP5.77□□□□□ -1.49
SMAD4-202ENST00000398417 AOPEPQ8N6M6 819 aa5.77□□□□□ -1.49
SMAD4-202ENST00000398417 NOC3LQ8WTT2 800 aaKnown RBP5.77□□□□□ -1.49
SMAD4-202ENST00000398417 PDLIM2Q96JY6 352 aa5.77□□□□□ -1.49
SMAD4-202ENST00000398417 PDCL3Q9H2J4 239 aa5.77□□□□□ -1.49
SMAD4-202ENST00000398417 CHD1O14646 1710 aa5.77□□□□□ -1.49
SMAD4-202ENST00000398417 CDC42BPBQ9Y5S2 1711 aa5.77□□□□□ -1.49
SMAD4-202ENST00000398417 DIP2CQ9Y2E4 1556 aa5.77□□□□□ -1.49
SMAD4-202ENST00000398417 ZAP70P43403 619 aa5.77□□□□□ -1.49
SMAD4-202ENST00000398417 TRMT112Q9UI30 125 aaKnown RBP5.77□□□□□ -1.49
SMAD4-202ENST00000398417 PIK3C2BO00750 1634 aa5.77□□□□□ -1.49
SMAD4-202ENST00000398417 CYP21A2P08686 494 aa5.76□□□□□ -1.49
SMAD4-202ENST00000398417 IL15P40933 162 aaPredicted RBP5.76□□□□□ -1.49
SMAD4-202ENST00000398417 CEP57L1Q8IYX8 460 aa5.76□□□□□ -1.49
SMAD4-202ENST00000398417 TMOD3Q9NYL9 352 aa5.76□□□□□ -1.49
SMAD4-202ENST00000398417 CTNNA3Q9UI47 895 aa5.76□□□□□ -1.49
SMAD4-202ENST00000398417 MRVI1Q9Y6F6 885 aa5.76□□□□□ -1.49
SMAD4-202ENST00000398417 NRDCO43847 1150 aa5.76□□□□□ -1.49
SMAD4-202ENST00000398417 BICDL1Q6ZP65 573 aa5.76□□□□□ -1.49
SMAD4-202ENST00000398417 CCDC112Q8NEF3 446 aa5.76□□□□□ -1.49
SMAD4-202ENST00000398417 NRBP1Q9UHY1 535 aa5.76□□□□□ -1.49
SMAD4-202ENST00000398417 TBC1D2BQ9UPU7 963 aa5.76□□□□□ -1.49
SMAD4-202ENST00000398417 C16orf45Q96MC5 204 aaPredicted RBP5.76□□□□□ -1.49
SMAD4-202ENST00000398417 HECW2Q9P2P5 1572 aa5.76□□□□□ -1.49
SMAD4-202ENST00000398417 A0A1B0GUL7 405 aa5.76□□□□□ -1.49
SMAD4-202ENST00000398417 ZNF213O14771 459 aa5.76□□□□□ -1.49
SMAD4-202ENST00000398417 CPLX2Q6PUV4 134 aaKnown RBP5.76□□□□□ -1.49
SMAD4-202ENST00000398417 MTX1Q13505 466 aa5.76□□□□□ -1.49
SMAD4-202ENST00000398417 COL9A3Q14050 684 aaPredicted RBP5.76□□□□□ -1.49
SMAD4-202ENST00000398417 DHX32Q7L7V1 743 aaKnown RBP5.76□□□□□ -1.49
SMAD4-202ENST00000398417 DNAJC10Q8IXB1 793 aa5.76□□□□□ -1.49
SMAD4-202ENST00000398417 PIBF1Q8WXW3 757 aa5.76□□□□□ -1.49
SMAD4-202ENST00000398417 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.76□□□□□ -1.49
SMAD4-202ENST00000398417 CFAP45Q9UL16 551 aa5.76□□□□□ -1.49
SMAD4-202ENST00000398417 V9GYY5 206 aaPredicted RBP5.76□□□□□ -1.49
SMAD4-202ENST00000398417 A0A0G2JLW4 131 aa5.76□□□□□ -1.49
SMAD4-202ENST00000398417 LRMPQ12912 555 aa5.76□□□□□ -1.49
SMAD4-202ENST00000398417 PI16Q6UXB8 463 aa5.76□□□□□ -1.49
SMAD4-202ENST00000398417 LDHAL6AQ6ZMR3 332 aa5.76□□□□□ -1.49
SMAD4-202ENST00000398417 HOMER1Q86YM7 354 aa5.76□□□□□ -1.49
SMAD4-202ENST00000398417 PDCL2Q8N4E4 241 aa5.76□□□□□ -1.49
SMAD4-202ENST00000398417 C8orf76Q96K31 380 aa5.76□□□□□ -1.49
SMAD4-202ENST00000398417 HELLSQ9NRZ9 838 aa5.76□□□□□ -1.49
SMAD4-202ENST00000398417 ANO10Q9NW15 660 aa5.76□□□□□ -1.49
SMAD4-202ENST00000398417 NPHP3Q7Z494 1330 aa5.76□□□□□ -1.49
SMAD4-202ENST00000398417 XAGE2Q96GT9 111 aa5.75□□□□□ -1.49
SMAD4-202ENST00000398417 HMGN5P82970 282 aaKnown RBP5.75□□□□□ -1.49
SMAD4-202ENST00000398417 FAM89AQ96GI7 184 aa5.75□□□□□ -1.49
SMAD4-202ENST00000398417 USP28Q96RU2 1077 aa5.75□□□□□ -1.49
SMAD4-202ENST00000398417 CCDC69A6NI79 296 aa5.75□□□□□ -1.49
SMAD4-202ENST00000398417 ZNF75DP51815 510 aa5.75□□□□□ -1.49
SMAD4-202ENST00000398417 PPP4R3BQ5MIZ7 849 aa5.75□□□□□ -1.49
SMAD4-202ENST00000398417 TMC6Q7Z403 805 aa5.75□□□□□ -1.49
SMAD4-202ENST00000398417 MYL10Q9BUA6 226 aa5.75□□□□□ -1.49
SMAD4-202ENST00000398417 IQSEC3Q9UPP2 1182 aaPredicted RBP5.75□□□□□ -1.49
SMAD4-202ENST00000398417 ANKRD18BA2A2Z9 1011 aa5.75□□□□□ -1.49
SMAD4-202ENST00000398417 MARCKSP29966 332 aaPredicted RBP5.75□□□□□ -1.49
SMAD4-202ENST00000398417 RESTQ13127 1097 aa5.75□□□□□ -1.49
SMAD4-202ENST00000398417 LRRFIP1Q32MZ4 808 aaKnown RBP5.75□□□□□ -1.49
SMAD4-202ENST00000398417 MAP7D2Q96T17 732 aa5.75□□□□□ -1.49
SMAD4-202ENST00000398417 MRPS27Q92552 414 aaKnown RBP5.75□□□□□ -1.49
SMAD4-202ENST00000398417 KAZALD1Q96I82 304 aa5.75□□□□□ -1.49
SMAD4-202ENST00000398417 SRCAPQ6ZRS2 3230 aa5.75□□□□□ -1.49
SMAD4-202ENST00000398417 E7EWF7 191 aa5.75□□□□□ -1.49
SMAD4-202ENST00000398417 RIOK3O14730 519 aaKnown RBP5.75□□□□□ -1.49
SMAD4-202ENST00000398417 AP5Z1O43299 807 aa5.75□□□□□ -1.49
SMAD4-202ENST00000398417 SERPINC1P01008 464 aa5.75□□□□□ -1.49
SMAD4-202ENST00000398417 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.75□□□□□ -1.49
SMAD4-202ENST00000398417 RAI14Q9P0K7 980 aa5.75□□□□□ -1.49
SMAD4-202ENST00000398417 AKAP2Q9Y2D5 859 aa5.75□□□□□ -1.49
SMAD4-202ENST00000398417 A0A1B0GVL5 298 aa5.75□□□□□ -1.49
SMAD4-202ENST00000398417 IGSF3O75054 1194 aa5.75□□□□□ -1.49
SMAD4-202ENST00000398417 SCRN1Q12765 414 aa5.75□□□□□ -1.49
SMAD4-202ENST00000398417 KBTBD3Q8NAB2 608 aa5.75□□□□□ -1.49
SMAD4-202ENST00000398417 NCOA7Q8NI08 942 aa5.75□□□□□ -1.49
SMAD4-202ENST00000398417 C19orf44Q9H6X5 657 aa5.75□□□□□ -1.49
SMAD4-202ENST00000398417 GOLGB1Q14789 3259 aaKnown RBP5.75□□□□□ -1.49
SMAD4-202ENST00000398417 CYP27B1O15528 508 aa5.74□□□□□ -1.49
SMAD4-202ENST00000398417 IFIT5Q13325 482 aaKnown RBP5.74□□□□□ -1.49
SMAD4-202ENST00000398417 PTPN21Q16825 1174 aa5.74□□□□□ -1.49
SMAD4-202ENST00000398417 C11orf57Q6ZUT1 292 aaPredicted RBP5.74□□□□□ -1.49
SMAD4-202ENST00000398417 AIDAQ96BJ3 306 aa5.74□□□□□ -1.49
SMAD4-202ENST00000398417 COPRSQ9NQ92 184 aa5.74□□□□□ -1.49
SMAD4-202ENST00000398417 GTF2E1P29083 439 aaPredicted RBP5.74□□□□□ -1.49
SMAD4-202ENST00000398417 PDIA6Q15084 440 aa5.74□□□□□ -1.49
SMAD4-202ENST00000398417 NSUN7Q8NE18 718 aaKnown RBP5.74□□□□□ -1.49
SMAD4-202ENST00000398417 H7C1W4 665 aa5.74□□□□□ -1.49
SMAD4-202ENST00000398417 PFKFB2O60825 505 aa5.74□□□□□ -1.49
SMAD4-202ENST00000398417 AKAP17AQ02040 695 aaKnown RBP5.74□□□□□ -1.49
SMAD4-202ENST00000398417 HSP90AA4PQ58FG1 418 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms