RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 KIAA2012Q0VF49 1180 aa22.31■■□□□ 1.16
TNFSF13-204ENST00000396542 TBC1D16Q8TBP0 767 aa22.31■■□□□ 1.16
TNFSF13-204ENST00000396542 MPHOSPH8Q99549 860 aa22.31■■□□□ 1.16
TNFSF13-204ENST00000396542 FZD9O00144 591 aa22.3■■□□□ 1.16
TNFSF13-204ENST00000396542 PPIP5K2O43314 1243 aa22.3■■□□□ 1.16
TNFSF13-204ENST00000396542 AOC3Q16853 763 aa22.3■■□□□ 1.16
TNFSF13-204ENST00000396542 LARGE2Q8N3Y3 721 aa22.3■■□□□ 1.16
TNFSF13-204ENST00000396542 ANKIB1Q9P2G1 1089 aa22.3■■□□□ 1.16
TNFSF13-204ENST00000396542 LRRFIP2Q9Y608 721 aaKnown RBP22.3■■□□□ 1.16
TNFSF13-204ENST00000396542 JDP2Q8WYK2 163 aa22.29■■□□□ 1.16
TNFSF13-204ENST00000396542 ZNF594Q96JF6 807 aaPredicted RBP22.29■■□□□ 1.16
TNFSF13-204ENST00000396542 GLTPD2A6NH11 291 aa22.28■■□□□ 1.16
TNFSF13-204ENST00000396542 C6orf229H3BNL8 230 aa22.28■■□□□ 1.16
TNFSF13-204ENST00000396542 MS4A1P11836 297 aa22.28■■□□□ 1.16
TNFSF13-204ENST00000396542 GGA1Q9UJY5 639 aa22.28■■□□□ 1.16
TNFSF13-204ENST00000396542 WDR90Q96KV7 1748 aa22.28■■□□□ 1.16
TNFSF13-204ENST00000396542 KDM2BQ8NHM5 1336 aa22.28■■□□□ 1.16
TNFSF13-204ENST00000396542 UFL1O94874 794 aa22.27■■□□□ 1.16
TNFSF13-204ENST00000396542 ATP2B4P23634 1241 aa22.27■■□□□ 1.16
TNFSF13-204ENST00000396542 RFX5P48382 616 aaPredicted RBP22.27■■□□□ 1.16
TNFSF13-204ENST00000396542 WASHC4Q2M389 1173 aa22.27■■□□□ 1.16
TNFSF13-204ENST00000396542 TAF7LQ5H9L4 462 aa22.27■■□□□ 1.16
TNFSF13-204ENST00000396542 LDHAL6AQ6ZMR3 332 aa22.27■■□□□ 1.16
TNFSF13-204ENST00000396542 PANK1Q8TE04 598 aa22.27■■□□□ 1.16
TNFSF13-204ENST00000396542 ZNF526Q8TF50 670 aaPredicted RBP22.27■■□□□ 1.16
TNFSF13-204ENST00000396542 EYA3Q99504 573 aa22.27■■□□□ 1.16
TNFSF13-204ENST00000396542 ANKRD2Q9GZV1 360 aa22.27■■□□□ 1.16
TNFSF13-204ENST00000396542 GPBP1L1Q9HC44 474 aaPredicted RBP22.27■■□□□ 1.16
TNFSF13-204ENST00000396542 CHRNDQ07001 517 aa22.26■■□□□ 1.15
TNFSF13-204ENST00000396542 NIM1KQ8IY84 436 aa22.26■■□□□ 1.15
TNFSF13-204ENST00000396542 ZNF541Q9H0D2 1346 aa22.26■■□□□ 1.15
TNFSF13-204ENST00000396542 ZBTB7BO15156 539 aaPredicted RBP22.25■■□□□ 1.15
TNFSF13-204ENST00000396542 PLIN1O60240 522 aa22.25■■□□□ 1.15
TNFSF13-204ENST00000396542 MTX1Q13505 466 aa22.25■■□□□ 1.15
TNFSF13-204ENST00000396542 DPY19L2Q6NUT2 758 aa22.25■■□□□ 1.15
TNFSF13-204ENST00000396542 ITPRIPQ8IWB1 547 aa22.25■■□□□ 1.15
TNFSF13-204ENST00000396542 GPR101Q96P66 508 aaPredicted RBP22.25■■□□□ 1.15
TNFSF13-204ENST00000396542 LEMD3Q9Y2U8 911 aa22.25■■□□□ 1.15
TNFSF13-204ENST00000396542 WTIPA6NIX2 430 aaPredicted RBP22.24■■□□□ 1.15
TNFSF13-204ENST00000396542 GNAI2P04899 355 aa22.24■■□□□ 1.15
TNFSF13-204ENST00000396542 PUS3Q9BZE2 481 aaKnown RBP22.24■■□□□ 1.15
TNFSF13-204ENST00000396542 CNNM1Q9NRU3 951 aa22.24■■□□□ 1.15
TNFSF13-204ENST00000396542 ZNRF3Q9ULT6 936 aa22.24■■□□□ 1.15
TNFSF13-204ENST00000396542 RIPOR2Q9Y4F9 1068 aa22.24■■□□□ 1.15
TNFSF13-204ENST00000396542 MED23Q9ULK4 1368 aa22.24■■□□□ 1.15
TNFSF13-204ENST00000396542 RIMBP2O15034 1052 aa22.23■■□□□ 1.15
TNFSF13-204ENST00000396542 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.23■■□□□ 1.15
TNFSF13-204ENST00000396542 ZC3H12CQ9C0D7 883 aaKnown RBP22.23■■□□□ 1.15
TNFSF13-204ENST00000396542 PTPN12Q05209 780 aaKnown RBP22.22■■□□□ 1.15
TNFSF13-204ENST00000396542 KLHDC4Q8TBB5 520 aa22.22■■□□□ 1.15
TNFSF13-204ENST00000396542 NMRK2Q9NPI5 230 aa22.22■■□□□ 1.15
TNFSF13-204ENST00000396542 ZNF804BA4D1E1 1349 aa22.22■■□□□ 1.15
TNFSF13-204ENST00000396542 PSME4Q14997 1843 aa22.22■■□□□ 1.15
TNFSF13-204ENST00000396542 DDNO94850 711 aaPredicted RBP22.21■■□□□ 1.15
TNFSF13-204ENST00000396542 EIF6P56537 245 aaKnown RBP22.21■■□□□ 1.15
TNFSF13-204ENST00000396542 PDE3AQ14432 1141 aa22.21■■□□□ 1.15
TNFSF13-204ENST00000396542 MVPQ14764 893 aaKnown RBP22.21■■□□□ 1.15
TNFSF13-204ENST00000396542 GPC2Q8N158 579 aa22.21■■□□□ 1.15
TNFSF13-204ENST00000396542 SCN4AP35499 1836 aa22.21■■□□□ 1.15
TNFSF13-204ENST00000396542 MROH5Q6ZUA9 1318 aa22.21■■□□□ 1.15
TNFSF13-204ENST00000396542 SCN9AQ15858 1988 aa22.2■■□□□ 1.14
TNFSF13-204ENST00000396542 YDJCA8MPS7 323 aa22.2■■□□□ 1.14
TNFSF13-204ENST00000396542 TAF5LO75529 589 aa22.2■■□□□ 1.14
TNFSF13-204ENST00000396542 LRRC24Q50LG9 513 aa22.2■■□□□ 1.14
TNFSF13-204ENST00000396542 HELBQ8NG08 1087 aaPredicted RBP22.2■■□□□ 1.14
TNFSF13-204ENST00000396542 L3MBTL3Q96JM7 780 aaPredicted RBP22.2■■□□□ 1.14
TNFSF13-204ENST00000396542 IRS2Q9Y4H2 1338 aa22.2■■□□□ 1.14
TNFSF13-204ENST00000396542 POTECB2RU33 542 aa22.19■■□□□ 1.14
TNFSF13-204ENST00000396542 KIF3CO14782 793 aa22.19■■□□□ 1.14
TNFSF13-204ENST00000396542 CXCL9Q07325 125 aa22.19■■□□□ 1.14
TNFSF13-204ENST00000396542 DBNDD1Q9H9R9 158 aa22.19■■□□□ 1.14
TNFSF13-204ENST00000396542 COPRSQ9NQ92 184 aa22.19■■□□□ 1.14
TNFSF13-204ENST00000396542 FBXO3Q9UK99 471 aa22.19■■□□□ 1.14
TNFSF13-204ENST00000396542 ZNF646O15015 1829 aaPredicted RBP22.18■■□□□ 1.14
TNFSF13-204ENST00000396542 EYA2O00167 538 aa22.18■■□□□ 1.14
TNFSF13-204ENST00000396542 SRGAP3O43295 1099 aa22.18■■□□□ 1.14
TNFSF13-204ENST00000396542 ECE2O60344 883 aa22.18■■□□□ 1.14
TNFSF13-204ENST00000396542 DOK7Q18PE1 504 aa22.18■■□□□ 1.14
TNFSF13-204ENST00000396542 C20orf194Q5TEA3 1177 aa22.18■■□□□ 1.14
TNFSF13-204ENST00000396542 C15orf52Q6ZUT6 534 aaKnown RBP22.18■■□□□ 1.14
TNFSF13-204ENST00000396542 VGLL2Q8N8G2 317 aa22.18■■□□□ 1.14
TNFSF13-204ENST00000396542 RRAGCQ9HB90 399 aa22.18■■□□□ 1.14
TNFSF13-204ENST00000396542 DDX19BQ9UMR2 479 aa22.18■■□□□ 1.14
TNFSF13-204ENST00000396542 COG6Q9Y2V7 657 aa22.18■■□□□ 1.14
TNFSF13-204ENST00000396542 SNAP23O00161 211 aa22.17■■□□□ 1.14
TNFSF13-204ENST00000396542 CIAO1O76071 339 aa22.17■■□□□ 1.14
TNFSF13-204ENST00000396542 KLRK1P26718 216 aa22.17■■□□□ 1.14
TNFSF13-204ENST00000396542 KCNJ4P48050 445 aa22.17■■□□□ 1.14
TNFSF13-204ENST00000396542 ATG9AQ7Z3C6 839 aa22.17■■□□□ 1.14
TNFSF13-204ENST00000396542 TXNRD3Q86VQ6 643 aa22.17■■□□□ 1.14
TNFSF13-204ENST00000396542 PNMA6EA0A0J9YXQ4 647 aa22.15■■□□□ 1.14
TNFSF13-204ENST00000396542 VEGFAP15692 232 aaPredicted RBP22.15■■□□□ 1.14
TNFSF13-204ENST00000396542 UBE4AQ14139 1066 aa22.15■■□□□ 1.14
TNFSF13-204ENST00000396542 CIAPIN1Q6FI81 312 aa22.15■■□□□ 1.14
TNFSF13-204ENST00000396542 PODNQ7Z5L7 613 aa22.15■■□□□ 1.14
TNFSF13-204ENST00000396542 C1orf115Q9H7X2 142 aa22.15■■□□□ 1.14
TNFSF13-204ENST00000396542 RAD17O75943 681 aa22.14■■□□□ 1.13
TNFSF13-204ENST00000396542 PDE8BO95263 885 aa22.14■■□□□ 1.13
TNFSF13-204ENST00000396542 RRP1P56182 461 aaKnown RBP22.14■■□□□ 1.13
TNFSF13-204ENST00000396542 POLA2Q14181 598 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms