RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 POLA2Q14181 598 aa19.08■□□□□ 0.64
PHTF1-205ENST00000393357 SUCLG2Q96I99 432 aa19.08■□□□□ 0.64
PHTF1-205ENST00000393357 REREQ9P2R6 1566 aa19.08■□□□□ 0.64
PHTF1-205ENST00000393357 NDUFA8P51970 172 aa19.08■□□□□ 0.64
PHTF1-205ENST00000393357 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.08■□□□□ 0.64
PHTF1-205ENST00000393357 LRRC59Q96AG4 307 aaKnown RBP19.08■□□□□ 0.64
PHTF1-205ENST00000393357 BTBD11A6QL63 1104 aa19.07■□□□□ 0.64
PHTF1-205ENST00000393357 KARSQ15046 597 aaKnown RBP19.07■□□□□ 0.64
PHTF1-205ENST00000393357 CHMP4CQ96CF2 233 aa19.07■□□□□ 0.64
PHTF1-205ENST00000393357 ABTB2Q8N961 1025 aa19.07■□□□□ 0.64
PHTF1-205ENST00000393357 SMARCE1Q969G3 411 aa19.07■□□□□ 0.64
PHTF1-205ENST00000393357 RNF216Q9NWF9 866 aaPredicted RBP19.07■□□□□ 0.64
PHTF1-205ENST00000393357 MCM6Q14566 821 aa19.06■□□□□ 0.64
PHTF1-205ENST00000393357 PLEKHA4Q9H4M7 779 aa19.06■□□□□ 0.64
PHTF1-205ENST00000393357 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.06■□□□□ 0.645e-7■■■■□ 25.2
PHTF1-205ENST00000393357 RXRAP19793 462 aa19.06■□□□□ 0.64
PHTF1-205ENST00000393357 PLA2G4AP47712 749 aa19.06■□□□□ 0.64
PHTF1-205ENST00000393357 ANKRD1Q15327 319 aa19.06■□□□□ 0.64
PHTF1-205ENST00000393357 SPECC1Q5M775 1068 aa19.06■□□□□ 0.64
PHTF1-205ENST00000393357 FHOD1Q9Y613 1164 aa19.06■□□□□ 0.64
PHTF1-205ENST00000393357 ERBB3P21860 1342 aa19.06■□□□□ 0.64
PHTF1-205ENST00000393357 ELP1O95163 1332 aa19.05■□□□□ 0.64
PHTF1-205ENST00000393357 CYP21A2P08686 494 aa19.05■□□□□ 0.64
PHTF1-205ENST00000393357 ATP2B1P20020 1258 aa19.05■□□□□ 0.64
PHTF1-205ENST00000393357 RAD51AP2Q09MP3 1159 aa19.05■□□□□ 0.64
PHTF1-205ENST00000393357 RIC3Q7Z5B4 369 aa19.05■□□□□ 0.64
PHTF1-205ENST00000393357 DESI2Q9BSY9 194 aa19.05■□□□□ 0.64
PHTF1-205ENST00000393357 OAS2P29728 719 aaKnown RBP19.05■□□□□ 0.64
PHTF1-205ENST00000393357 EVCP57679 992 aa19.05■□□□□ 0.64
PHTF1-205ENST00000393357 NBPF11Q86T75 865 aa19.05■□□□□ 0.64
PHTF1-205ENST00000393357 NRDCO43847 1150 aa19.04■□□□□ 0.64
PHTF1-205ENST00000393357 GNG11P61952 73 aa19.04■□□□□ 0.64
PHTF1-205ENST00000393357 SLC39A6Q13433 755 aa19.04■□□□□ 0.64
PHTF1-205ENST00000393357 WWC2Q6AWC2 1192 aa19.04■□□□□ 0.64
PHTF1-205ENST00000393357 CPLX3Q8WVH0 158 aa19.04■□□□□ 0.64
PHTF1-205ENST00000393357 CLIC4Q9Y696 253 aa19.04■□□□□ 0.64
PHTF1-205ENST00000393357 CCDC191Q8NCU4 936 aa19.04■□□□□ 0.64
PHTF1-205ENST00000393357 DPF2Q92785 391 aa19.04■□□□□ 0.64
PHTF1-205ENST00000393357 MRFAP1L1Q96HT8 127 aa19.04■□□□□ 0.64
PHTF1-205ENST00000393357 TM6SF1Q9BZW5 370 aa19.04■□□□□ 0.64
PHTF1-205ENST00000393357 PCDHA7Q9UN72 937 aa19.04■□□□□ 0.64
PHTF1-205ENST00000393357 SETD1BQ9UPS6 1966 aaKnown RBP19.04■□□□□ 0.64
PHTF1-205ENST00000393357 AATKQ6ZMQ8 1374 aa19.04■□□□□ 0.64
PHTF1-205ENST00000393357 CCDC85AQ96PX6 553 aaPredicted RBP19.04■□□□□ 0.64
PHTF1-205ENST00000393357 IRX2Q9BZI1 471 aaPredicted RBP19.04■□□□□ 0.64
PHTF1-205ENST00000393357 TOMM22Q9NS69 142 aa19.04■□□□□ 0.64
PHTF1-205ENST00000393357 LCMT1Q9UIC8 334 aa19.04■□□□□ 0.64
PHTF1-205ENST00000393357 AOX1Q06278 1338 aa19.03■□□□□ 0.64
PHTF1-205ENST00000393357 TTC41PQ6P2S7 1318 aa19.03■□□□□ 0.64
PHTF1-205ENST00000393357 ATP5J2-PTCD1G3V325 749 aa19.03■□□□□ 0.64
PHTF1-205ENST00000393357 PTCD1O75127 700 aaKnown RBP19.03■□□□□ 0.64
PHTF1-205ENST00000393357 NAT10Q9H0A0 1025 aaKnown RBP19.03■□□□□ 0.64
PHTF1-205ENST00000393357 PUF60Q9UHX1 559 aaKnown RBP19.03■□□□□ 0.64
PHTF1-205ENST00000393357 TMEM232C9JQI7 657 aa19.03■□□□□ 0.64
PHTF1-205ENST00000393357 TFRCP02786 760 aaKnown RBP19.03■□□□□ 0.64
PHTF1-205ENST00000393357 RSPH14Q9UHP6 348 aa19.03■□□□□ 0.64
PHTF1-205ENST00000393357 RIMS1Q86UR5 1692 aaKnown RBP19.03■□□□□ 0.64
PHTF1-205ENST00000393357 SNRKQ9NRH2 765 aa19.02■□□□□ 0.64
PHTF1-205ENST00000393357 ARGLU1Q9NWB6 273 aaPredicted RBP19.02■□□□□ 0.64
PHTF1-205ENST00000393357 NEO1Q92859 1461 aa19.02■□□□□ 0.64
PHTF1-205ENST00000393357 TAF5LO75529 589 aa19.02■□□□□ 0.64
PHTF1-205ENST00000393357 HINFPQ9BQA5 517 aa19.02■□□□□ 0.64
PHTF1-205ENST00000393357 GOLIM4O00461 696 aa19.02■□□□□ 0.63
PHTF1-205ENST00000393357 SLC3A2P08195 630 aaKnown RBP19.01■□□□□ 0.63
PHTF1-205ENST00000393357 FAM160A1Q05DH4 1040 aa19.01■□□□□ 0.63
PHTF1-205ENST00000393357 ZNF530Q6P9A1 599 aaPredicted RBP19.01■□□□□ 0.63
PHTF1-205ENST00000393357 SIGLEC1Q9BZZ2 1709 aa19.01■□□□□ 0.63
PHTF1-205ENST00000393357 ADKP55263 362 aaKnown RBP19.01■□□□□ 0.63
PHTF1-205ENST00000393357 DBNDD2Q9BQY9 259 aa19.01■□□□□ 0.63
PHTF1-205ENST00000393357 RABEP2Q9H5N1 569 aa19.01■□□□□ 0.63
PHTF1-205ENST00000393357 STOX1Q6ZVD7 989 aa19■□□□□ 0.63
PHTF1-205ENST00000393357 UBASH3AP57075 661 aa19■□□□□ 0.63
PHTF1-205ENST00000393357 TFCP2Q12800 502 aa19■□□□□ 0.63
PHTF1-205ENST00000393357 SASH3O75995 380 aa19■□□□□ 0.63
PHTF1-205ENST00000393357 SYCP1Q15431 976 aa19■□□□□ 0.63
PHTF1-205ENST00000393357 MRPS27Q92552 414 aaKnown RBP19■□□□□ 0.63
PHTF1-205ENST00000393357 LZTFL1Q9NQ48 299 aa19■□□□□ 0.63
PHTF1-205ENST00000393357 PIK3C2BO00750 1634 aa19■□□□□ 0.63
PHTF1-205ENST00000393357 ALKQ9UM73 1620 aa19■□□□□ 0.63
PHTF1-205ENST00000393357 CYP2C19P33261 490 aa18.99■□□□□ 0.63
PHTF1-205ENST00000393357 EIF4A1P60842 406 aaKnown RBP18.99■□□□□ 0.63
PHTF1-205ENST00000393357 EPHA10Q5JZY3 1008 aa18.99■□□□□ 0.63
PHTF1-205ENST00000393357 ZNF330Q9Y3S2 320 aaPredicted RBP18.99■□□□□ 0.63
PHTF1-205ENST00000393357 NEMFO60524 1076 aa18.99■□□□□ 0.63
PHTF1-205ENST00000393357 FANCCQ00597 558 aa18.99■□□□□ 0.63
PHTF1-205ENST00000393357 CCDC82Q8N4S0 544 aa18.99■□□□□ 0.63
PHTF1-205ENST00000393357 AIFM3Q96NN9 605 aa18.99■□□□□ 0.63
PHTF1-205ENST00000393357 SUGCTQ9HAC7 445 aa18.99■□□□□ 0.63
PHTF1-205ENST00000393357 NSUN7Q8NE18 718 aaKnown RBP18.98■□□□□ 0.63
PHTF1-205ENST00000393357 MYD88Q99836 296 aa18.98■□□□□ 0.63
PHTF1-205ENST00000393357 SMC1AQ14683 1233 aaKnown RBP18.98■□□□□ 0.63
PHTF1-205ENST00000393357 ZNF827Q17R98 1081 aa18.98■□□□□ 0.63
PHTF1-205ENST00000393357 SYNE3Q6ZMZ3 975 aa18.98■□□□□ 0.63
PHTF1-205ENST00000393357 MYO5BQ9ULV0 1848 aa18.98■□□□□ 0.63
PHTF1-205ENST00000393357 COBLO75128 1261 aa18.98■□□□□ 0.63
PHTF1-205ENST00000393357 TIMM10P62072 90 aa18.98■□□□□ 0.63
PHTF1-205ENST00000393357 AEBP2Q6ZN18 517 aaPredicted RBP18.98■□□□□ 0.63
PHTF1-205ENST00000393357 WDR24Q96S15 920 aa18.98■□□□□ 0.63
PHTF1-205ENST00000393357 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.98■□□□□ 0.63
PHTF1-205ENST00000393357 ORC3Q9UBD5 711 aaPredicted RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms