RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 HLA-DOAP06340 250 aa14.57□□□□□ -0.08
CLTC-202ENST00000393043 NBPF7P0C2Y1 421 aaPredicted RBP14.57□□□□□ -0.08
CLTC-202ENST00000393043 RTN1Q16799 776 aa14.57□□□□□ -0.08
CLTC-202ENST00000393043 RUFY3Q7L099 469 aa14.57□□□□□ -0.08
CLTC-202ENST00000393043 CALML4Q96GE6 196 aa14.57□□□□□ -0.08
CLTC-202ENST00000393043 EHMT1Q9H9B1 1298 aa14.57□□□□□ -0.08
CLTC-202ENST00000393043 KDM6BO15054 1643 aa14.57□□□□□ -0.08
CLTC-202ENST00000393043 GNAQP50148 359 aa14.57□□□□□ -0.08
CLTC-202ENST00000393043 LRRC2Q9BYS8 371 aa14.57□□□□□ -0.08
CLTC-202ENST00000393043 GBP3Q9H0R5 595 aa14.57□□□□□ -0.08
CLTC-202ENST00000393043 IRS4O14654 1257 aaPredicted RBP14.56□□□□□ -0.08
CLTC-202ENST00000393043 PRC1O43663 620 aa14.56□□□□□ -0.08
CLTC-202ENST00000393043 HCLS1P14317 486 aaPredicted RBP14.56□□□□□ -0.08
CLTC-202ENST00000393043 SYKP43405 635 aa14.56□□□□□ -0.08
CLTC-202ENST00000393043 TAF4BQ92750 862 aa14.56□□□□□ -0.08
CLTC-202ENST00000393043 CCDC171Q6TFL3 1326 aa14.56□□□□□ -0.08
CLTC-202ENST00000393043 UBA7P41226 1012 aa14.56□□□□□ -0.08
CLTC-202ENST00000393043 NAA16Q6N069 864 aaPredicted RBP14.56□□□□□ -0.08
CLTC-202ENST00000393043 DHX32Q7L7V1 743 aaKnown RBP14.56□□□□□ -0.08
CLTC-202ENST00000393043 MRPS27Q92552 414 aaKnown RBP14.56□□□□□ -0.08
CLTC-202ENST00000393043 SYNMO15061 1565 aa14.56□□□□□ -0.08
CLTC-202ENST00000393043 GIMAP6Q6P9H5 292 aa14.56□□□□□ -0.08
CLTC-202ENST00000393043 HELLSQ9NRZ9 838 aa14.56□□□□□ -0.08
CLTC-202ENST00000393043 MAGI2Q86UL8 1455 aa14.56□□□□□ -0.08
CLTC-202ENST00000393043 RRP9O43818 475 aaKnown RBP14.56□□□□□ -0.08
CLTC-202ENST00000393043 PPP4R3BQ5MIZ7 849 aa14.56□□□□□ -0.08
CLTC-202ENST00000393043 BIN1O00499 593 aa14.55□□□□□ -0.08
CLTC-202ENST00000393043 PREX2Q70Z35 1606 aa14.55□□□□□ -0.08
CLTC-202ENST00000393043 YEATS4O95619 227 aa14.55□□□□□ -0.08
CLTC-202ENST00000393043 IFIT1BQ5T764 474 aaKnown RBP14.55□□□□□ -0.08
CLTC-202ENST00000393043 RAB11FIP4Q86YS3 637 aa14.55□□□□□ -0.08
CLTC-202ENST00000393043 FAM200AQ8TCP9 573 aa14.55□□□□□ -0.08
CLTC-202ENST00000393043 GOLGA6L9A6NEM1 432 aa14.55□□□□□ -0.08
CLTC-202ENST00000393043 LRRC27Q9C0I9 530 aa14.55□□□□□ -0.08
CLTC-202ENST00000393043 TTC37Q6PGP7 1564 aa14.54□□□□□ -0.08
CLTC-202ENST00000393043 MLH3Q9UHC1 1453 aa14.54□□□□□ -0.08
CLTC-202ENST00000393043 CACNA2D4Q7Z3S7 1137 aa14.54□□□□□ -0.08
CLTC-202ENST00000393043 CCDC150Q8NCX0 1101 aa14.54□□□□□ -0.08
CLTC-202ENST00000393043 CDCA7Q9BWT1 371 aaPredicted RBP14.54□□□□□ -0.08
CLTC-202ENST00000393043 ERVK-7P63135 1459 aa14.54□□□□□ -0.08
CLTC-202ENST00000393043 USP19O94966 1318 aa14.54□□□□□ -0.08
CLTC-202ENST00000393043 ACSBG1Q96GR2 724 aa14.54□□□□□ -0.08
CLTC-202ENST00000393043 CALM1P0DP23 149 aa14.54□□□□□ -0.08
CLTC-202ENST00000393043 CALM2P0DP24 149 aa14.54□□□□□ -0.08
CLTC-202ENST00000393043 CALM3P0DP25 149 aa14.54□□□□□ -0.08
CLTC-202ENST00000393043 TNNT1P13805 278 aa14.54□□□□□ -0.08
CLTC-202ENST00000393043 DNM1Q05193 864 aaKnown RBP14.54□□□□□ -0.08
CLTC-202ENST00000393043 TMC6Q7Z403 805 aa14.54□□□□□ -0.08
CLTC-202ENST00000393043 CCDC191Q8NCU4 936 aa14.54□□□□□ -0.08
CLTC-202ENST00000393043 VPS36Q86VN1 386 aa14.54□□□□□ -0.08
CLTC-202ENST00000393043 SLC52A2Q9HAB3 445 aa14.54□□□□□ -0.08
CLTC-202ENST00000393043 SEPT11Q9NVA2 429 aaKnown RBP14.54□□□□□ -0.08
CLTC-202ENST00000393043 RMND1Q9NWS8 449 aa14.54□□□□□ -0.08
CLTC-202ENST00000393043 FAM135BQ49AJ0 1406 aa14.54□□□□□ -0.08
CLTC-202ENST00000393043 EYA2O00167 538 aa14.53□□□□□ -0.08
CLTC-202ENST00000393043 FAM114A1Q8IWE2 563 aa14.53□□□□□ -0.08
CLTC-202ENST00000393043 CASQ1P31415 396 aa14.53□□□□□ -0.08
CLTC-202ENST00000393043 ABCC4O15439 1325 aa14.53□□□□□ -0.08
CLTC-202ENST00000393043 TPTE2Q6XPS3 522 aa14.53□□□□□ -0.08
CLTC-202ENST00000393043 ORAI2Q96SN7 254 aa14.53□□□□□ -0.08
CLTC-202ENST00000393043 NUP88Q99567 741 aaPredicted RBP14.53□□□□□ -0.08
CLTC-202ENST00000393043 AATKQ6ZMQ8 1374 aa14.53□□□□□ -0.08
CLTC-202ENST00000393043 TMCO3Q6UWJ1 677 aa14.53□□□□□ -0.08
CLTC-202ENST00000393043 CABP5Q9NP86 173 aa14.53□□□□□ -0.08
CLTC-202ENST00000393043 DACT1Q9NYF0 836 aa14.53□□□□□ -0.08
CLTC-202ENST00000393043 ATL3Q6DD88 541 aa14.52□□□□□ -0.08
CLTC-202ENST00000393043 LGR6Q9HBX8 967 aa14.52□□□□□ -0.08
CLTC-202ENST00000393043 STX8Q9UNK0 236 aa14.52□□□□□ -0.08
CLTC-202ENST00000393043 RTL9Q8NET4 1388 aa14.52□□□□□ -0.08
CLTC-202ENST00000393043 MAGEB6P1A0A0J9YX57 407 aa14.52□□□□□ -0.08
CLTC-202ENST00000393043 CNKSR2Q8WXI2 1034 aa14.52□□□□□ -0.08
CLTC-202ENST00000393043 URI1O94763 535 aaPredicted RBP14.52□□□□□ -0.09
CLTC-202ENST00000393043 TSPY3P0CV98 308 aa14.52□□□□□ -0.09
CLTC-202ENST00000393043 TSPY8P0CW00 308 aa14.52□□□□□ -0.09
CLTC-202ENST00000393043 XRCC6P12956 609 aaKnown RBP eCLIP14.52□□□□□ -0.09
CLTC-202ENST00000393043 KIF4BQ2VIQ3 1234 aa14.52□□□□□ -0.09
CLTC-202ENST00000393043 JAKMIP3Q5VZ66 844 aa14.52□□□□□ -0.09
CLTC-202ENST00000393043 YEATS2Q9ULM3 1422 aa14.52□□□□□ -0.09
CLTC-202ENST00000393043 USO1O60763 962 aaKnown RBP14.52□□□□□ -0.09
CLTC-202ENST00000393043 PPFIA3O75145 1194 aa14.52□□□□□ -0.09
CLTC-202ENST00000393043 TNNI3KQ59H18 835 aa14.52□□□□□ -0.09
CLTC-202ENST00000393043 FPGT-TNNI3KV9GXZ4 949 aa14.52□□□□□ -0.09
CLTC-202ENST00000393043 TRAF1Q13077 416 aa14.51□□□□□ -0.09
CLTC-202ENST00000393043 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.51□□□□□ -0.093e-6■■■■■ 33.4
CLTC-202ENST00000393043 ZNF804AQ7Z570 1209 aa14.51□□□□□ -0.09
CLTC-202ENST00000393043 EIF4A1P60842 406 aaKnown RBP14.51□□□□□ -0.09
CLTC-202ENST00000393043 BRAPQ7Z569 592 aa14.51□□□□□ -0.09
CLTC-202ENST00000393043 OTUD7AQ8TE49 926 aaPredicted RBP14.51□□□□□ -0.09
CLTC-202ENST00000393043 PANK2Q9BZ23 570 aa14.51□□□□□ -0.09
CLTC-202ENST00000393043 ANKRD2Q9GZV1 360 aa14.51□□□□□ -0.09
CLTC-202ENST00000393043 MCM3P25205 808 aa14.51□□□□□ -0.09
CLTC-202ENST00000393043 MTIF2P46199 727 aaKnown RBP14.51□□□□□ -0.09
CLTC-202ENST00000393043 ANO6Q4KMQ2 910 aa14.51□□□□□ -0.09
CLTC-202ENST00000393043 POTEJP0CG39 1038 aa14.5□□□□□ -0.09
CLTC-202ENST00000393043 PARP10Q53GL7 1025 aa14.5□□□□□ -0.09
CLTC-202ENST00000393043 SPTLC2O15270 562 aa14.5□□□□□ -0.09
CLTC-202ENST00000393043 TRMT2AQ8IZ69 625 aaKnown RBP14.5□□□□□ -0.09
CLTC-202ENST00000393043 CLASP1Q7Z460 1538 aa14.5□□□□□ -0.09
CLTC-202ENST00000393043 H0YHG0 523 aa14.5□□□□□ -0.09
CLTC-202ENST00000393043 SGSM2O43147 1006 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms