RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 SLC6A14Q9UN76 642 aa7.59□□□□□ -1.19
SNORA40.2-201ENST00000390847 ELOA3CA0A087WX78 387 aaPredicted RBP7.58□□□□□ -1.2
SNORA40.2-201ENST00000390847 ELOA3DA6NLF2 546 aaPredicted RBP7.58□□□□□ -1.2
SNORA40.2-201ENST00000390847 ADARB2-AS1A8MUL3 147 aa7.58□□□□□ -1.2
SNORA40.2-201ENST00000390847 GHRHP01286 108 aa7.58□□□□□ -1.2
SNORA40.2-201ENST00000390847 SLURP2P0DP57 97 aa7.58□□□□□ -1.2
SNORA40.2-201ENST00000390847 CPB1P15086 417 aa7.58□□□□□ -1.2
SNORA40.2-201ENST00000390847 EIF2AK2P19525 551 aaKnown RBP7.58□□□□□ -1.2
SNORA40.2-201ENST00000390847 ELOA3BQ3SY89 546 aa7.58□□□□□ -1.2
SNORA40.2-201ENST00000390847 COL13A1Q5TAT6 717 aaPredicted RBP7.58□□□□□ -1.2
SNORA40.2-201ENST00000390847 ELOA3Q8NG57 546 aa7.58□□□□□ -1.2
SNORA40.2-201ENST00000390847 RBSNQ9H1K0 784 aa7.58□□□□□ -1.2
SNORA40.2-201ENST00000390847 LOC102724428A0A0B4J2F2 783 aa7.57□□□□□ -1.2
SNORA40.2-201ENST00000390847 ZBTB42B2RXF5 422 aa7.57□□□□□ -1.2
SNORA40.2-201ENST00000390847 J3QW42 95 aa7.57□□□□□ -1.2
SNORA40.2-201ENST00000390847 BCRP11274 1271 aa7.57□□□□□ -1.2
SNORA40.2-201ENST00000390847 EPXP11678 715 aa7.57□□□□□ -1.2
SNORA40.2-201ENST00000390847 EDN3P14138 238 aa7.57□□□□□ -1.2
SNORA40.2-201ENST00000390847 SIK1P57059 783 aa7.57□□□□□ -1.2
SNORA40.2-201ENST00000390847 MICALL1Q8N3F8 863 aa7.57□□□□□ -1.2
SNORA40.2-201ENST00000390847 GALNT6Q8NCL4 622 aa7.57□□□□□ -1.2
SNORA40.2-201ENST00000390847 GIPC2Q8TF65 315 aa7.57□□□□□ -1.2
SNORA40.2-201ENST00000390847 CCDC74AQ96AQ1 378 aa7.57□□□□□ -1.2
SNORA40.2-201ENST00000390847 SETDB2Q96T68 719 aa7.57□□□□□ -1.2
SNORA40.2-201ENST00000390847 WWC3Q9ULE0 1092 aa7.57□□□□□ -1.2
SNORA40.2-201ENST00000390847 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.57□□□□□ -1.2
SNORA40.2-201ENST00000390847 HOXD8P13378 290 aaPredicted RBP7.56□□□□□ -1.2
SNORA40.2-201ENST00000390847 AMPD1P23109 780 aa7.56□□□□□ -1.2
SNORA40.2-201ENST00000390847 FGD1P98174 961 aa7.56□□□□□ -1.2
SNORA40.2-201ENST00000390847 MAP3K10Q02779 954 aa7.56□□□□□ -1.2
SNORA40.2-201ENST00000390847 ALG1LQ6GMV1 187 aa7.56□□□□□ -1.2
SNORA40.2-201ENST00000390847 ELMSAN1Q6PJG2 1045 aa7.56□□□□□ -1.2
SNORA40.2-201ENST00000390847 LYPD4Q6UWN0 246 aa7.56□□□□□ -1.2
SNORA40.2-201ENST00000390847 FBXO33Q7Z6M2 555 aa7.56□□□□□ -1.2
SNORA40.2-201ENST00000390847 EDARADDQ8WWZ3 215 aa7.56□□□□□ -1.2
SNORA40.2-201ENST00000390847 NPHS2Q9NP85 383 aa7.56□□□□□ -1.2
SNORA40.2-201ENST00000390847 LATS2Q9NRM7 1088 aa7.56□□□□□ -1.2
SNORA40.2-201ENST00000390847 NLRP2Q9NX02 1062 aa7.56□□□□□ -1.2
SNORA40.2-201ENST00000390847 OIP5O43482 229 aa7.55□□□□□ -1.2
SNORA40.2-201ENST00000390847 GADD45BO75293 160 aaPredicted RBP7.55□□□□□ -1.2
SNORA40.2-201ENST00000390847 KIF4AO95239 1232 aa7.55□□□□□ -1.2
SNORA40.2-201ENST00000390847 CELA2BP08218 269 aaPredicted RBP7.55□□□□□ -1.2
SNORA40.2-201ENST00000390847 IRS1P35568 1242 aa7.55□□□□□ -1.2
SNORA40.2-201ENST00000390847 ZNF326Q5BKZ1 582 aaKnown RBP7.55□□□□□ -1.2
SNORA40.2-201ENST00000390847 LCE2AQ5TA79 106 aaPredicted RBP7.55□□□□□ -1.2
SNORA40.2-201ENST00000390847 C1orf229Q6ZS94 237 aaPredicted RBP7.55□□□□□ -1.2
SNORA40.2-201ENST00000390847 GALNT12Q8IXK2 581 aa7.55□□□□□ -1.2
SNORA40.2-201ENST00000390847 SVOPQ8N4V2 548 aa7.55□□□□□ -1.2
SNORA40.2-201ENST00000390847 EPS8L3Q8TE67 593 aaKnown RBP7.55□□□□□ -1.2
SNORA40.2-201ENST00000390847 WHAMMQ8TF30 809 aa7.55□□□□□ -1.2
SNORA40.2-201ENST00000390847 SALL4Q9UJQ4 1053 aa7.55□□□□□ -1.2
SNORA40.2-201ENST00000390847 NAGPAQ9UK23 515 aa7.55□□□□□ -1.2
SNORA40.2-201ENST00000390847 PRPF40AO75400 957 aaKnown RBP7.54□□□□□ -1.2
SNORA40.2-201ENST00000390847 TAGLNQ01995 201 aaKnown RBP7.54□□□□□ -1.2
SNORA40.2-201ENST00000390847 PERM1Q5SV97 790 aa7.54□□□□□ -1.2
SNORA40.2-201ENST00000390847 PSAPL1Q6NUJ1 521 aa7.54□□□□□ -1.2
SNORA40.2-201ENST00000390847 FBF1Q8TES7 1133 aa7.54□□□□□ -1.2
SNORA40.2-201ENST00000390847 ACPPP15309 386 aa7.53□□□□□ -1.2
SNORA40.2-201ENST00000390847 ATP11AP98196 1134 aa7.53□□□□□ -1.2
SNORA40.2-201ENST00000390847 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.53□□□□□ -1.2
SNORA40.2-201ENST00000390847 PI16Q6UXB8 463 aa7.53□□□□□ -1.2
SNORA40.2-201ENST00000390847 CEP120Q8N960 986 aa7.53□□□□□ -1.2
SNORA40.2-201ENST00000390847 NEDD1Q8NHV4 660 aa7.53□□□□□ -1.2
SNORA40.2-201ENST00000390847 NUDT8Q8WV74 236 aa7.53□□□□□ -1.2
SNORA40.2-201ENST00000390847 PLD4Q96BZ4 506 aa7.53□□□□□ -1.2
SNORA40.2-201ENST00000390847 OSMRQ99650 979 aa7.53□□□□□ -1.2
SNORA40.2-201ENST00000390847 MDFIQ99750 246 aa7.53□□□□□ -1.2
SNORA40.2-201ENST00000390847 DUSP9Q99956 384 aaKnown RBP7.53□□□□□ -1.2
SNORA40.2-201ENST00000390847 SMG9Q9H0W8 520 aaKnown RBP7.53□□□□□ -1.2
SNORA40.2-201ENST00000390847 BCL11AQ9H165 835 aa7.53□□□□□ -1.2
SNORA40.2-201ENST00000390847 EHD4Q9H223 541 aa7.53□□□□□ -1.2
SNORA40.2-201ENST00000390847 ENAMQ9NRM1 1142 aa7.53□□□□□ -1.2
SNORA40.2-201ENST00000390847 SHISA8B8ZZ34 492 aa7.52□□□□□ -1.21
SNORA40.2-201ENST00000390847 TRPA1O75762 1119 aa7.52□□□□□ -1.21
SNORA40.2-201ENST00000390847 RGS9O75916 674 aaPredicted RBP7.52□□□□□ -1.21
SNORA40.2-201ENST00000390847 SMNDC1O75940 238 aaKnown RBP eCLIP7.52□□□□□ -1.21
SNORA40.2-201ENST00000390847 XPCQ01831 940 aaPredicted RBP7.52□□□□□ -1.21
SNORA40.2-201ENST00000390847 ZNF385CQ66K41 422 aaPredicted RBP7.52□□□□□ -1.21
SNORA40.2-201ENST00000390847 CHSY3Q70JA7 882 aa7.52□□□□□ -1.21
SNORA40.2-201ENST00000390847 ZKSCAN3Q9BRR0 538 aa7.52□□□□□ -1.21
SNORA40.2-201ENST00000390847 RASSF4Q9H2L5 321 aa7.52□□□□□ -1.21
SNORA40.2-201ENST00000390847 RRAGCQ9HB90 399 aa7.52□□□□□ -1.21
SNORA40.2-201ENST00000390847 JPH1Q9HDC5 661 aaPredicted RBP7.52□□□□□ -1.21
SNORA40.2-201ENST00000390847 LRRC4BQ9NT99 713 aa7.52□□□□□ -1.21
SNORA40.2-201ENST00000390847 A0A1W2PP55 124 aa7.51□□□□□ -1.21
SNORA40.2-201ENST00000390847 WIPF1O43516 503 aa7.51□□□□□ -1.21
SNORA40.2-201ENST00000390847 ZNF16P17020 682 aaPredicted RBP7.51□□□□□ -1.21
SNORA40.2-201ENST00000390847 PEAR1Q5VY43 1037 aaPredicted RBP7.51□□□□□ -1.21
SNORA40.2-201ENST00000390847 CEP135Q66GS9 1140 aa7.51□□□□□ -1.21
SNORA40.2-201ENST00000390847 KANK3Q6NY19 840 aa7.51□□□□□ -1.21
SNORA40.2-201ENST00000390847 BTBD6Q96KE9 485 aa7.51□□□□□ -1.21
SNORA40.2-201ENST00000390847 PBX4Q9BYU1 374 aa7.51□□□□□ -1.21
SNORA40.2-201ENST00000390847 DZANK1Q9NVP4 752 aa7.51□□□□□ -1.21
SNORA40.2-201ENST00000390847 PARP2Q9UGN5 583 aa7.51□□□□□ -1.21
SNORA40.2-201ENST00000390847 SPG7Q9UQ90 795 aa7.51□□□□□ -1.21
SNORA40.2-201ENST00000390847 STARD13Q9Y3M8 1113 aa7.51□□□□□ -1.21
SNORA40.2-201ENST00000390847 RBM47A0AV96 593 aaKnown RBP7.5□□□□□ -1.21
SNORA40.2-201ENST00000390847 M0R082 166 aa7.5□□□□□ -1.21
SNORA40.2-201ENST00000390847 PDE2AO00408 941 aaPredicted RBP7.5□□□□□ -1.21
SNORA40.2-201ENST00000390847 PSMD2Q13200 908 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms