RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 CLIP2Q9UDT6 1046 aa16.89■□□□□ 0.29
PSME4-201ENST00000389993 SOS1Q07889 1333 aaPredicted RBP16.89■□□□□ 0.29
PSME4-201ENST00000389993 TNNT1P13805 278 aa16.88■□□□□ 0.29
PSME4-201ENST00000389993 PDE4BQ07343 736 aa16.88■□□□□ 0.29
PSME4-201ENST00000389993 ZBTB43O43298 467 aa16.88■□□□□ 0.29
PSME4-201ENST00000389993 IDEP14735 1019 aa16.88■□□□□ 0.29
PSME4-201ENST00000389993 PROSER3Q2NL68 480 aa16.88■□□□□ 0.29
PSME4-201ENST00000389993 TTLL7Q6ZT98 887 aa16.88■□□□□ 0.29
PSME4-201ENST00000389993 SCAND2PQ9GZW5 306 aaPredicted RBP16.88■□□□□ 0.29
PSME4-201ENST00000389993 MCM9Q9NXL9 1143 aa16.88■□□□□ 0.29
PSME4-201ENST00000389993 BMP2KQ9NSY1 1161 aaPredicted RBP16.88■□□□□ 0.29
PSME4-201ENST00000389993 CCNL1Q9UK58 526 aaPredicted RBP16.88■□□□□ 0.29
PSME4-201ENST00000389993 PRDM1O75626 825 aa16.87■□□□□ 0.29
PSME4-201ENST00000389993 ZNF287Q9HBT7 754 aa16.87■□□□□ 0.29
PSME4-201ENST00000389993 CCDC196A0A1B0GTZ2 297 aa16.87■□□□□ 0.29
PSME4-201ENST00000389993 BAG3O95817 575 aa16.87■□□□□ 0.29
PSME4-201ENST00000389993 MYL10Q9BUA6 226 aa16.87■□□□□ 0.29
PSME4-201ENST00000389993 USP26Q9BXU7 913 aa16.87■□□□□ 0.29
PSME4-201ENST00000389993 ADCY5O95622 1261 aa16.87■□□□□ 0.29
PSME4-201ENST00000389993 SSR1P43307 286 aaKnown RBP16.87■□□□□ 0.29
PSME4-201ENST00000389993 CENPHQ9H3R5 247 aa16.87■□□□□ 0.29
PSME4-201ENST00000389993 RNF113AO15541 343 aaKnown RBP16.86■□□□□ 0.29
PSME4-201ENST00000389993 MBD4O95243 580 aa16.86■□□□□ 0.29
PSME4-201ENST00000389993 UQCRFS1P1P0C7P4 283 aa16.86■□□□□ 0.29
PSME4-201ENST00000389993 METTL22Q9BUU2 404 aaPredicted RBP16.86■□□□□ 0.29
PSME4-201ENST00000389993 DCAF8L1A6NGE4 600 aa16.86■□□□□ 0.29
PSME4-201ENST00000389993 EIF4A1P60842 406 aaKnown RBP16.86■□□□□ 0.29
PSME4-201ENST00000389993 hCG_1642624A0A1W2PR95 340 aa16.86■□□□□ 0.29
PSME4-201ENST00000389993 OTUD7BQ6GQQ9 843 aa16.86■□□□□ 0.29
PSME4-201ENST00000389993 TMC6Q7Z403 805 aa16.86■□□□□ 0.29
PSME4-201ENST00000389993 SMC5Q8IY18 1101 aa16.86■□□□□ 0.29
PSME4-201ENST00000389993 SAMM50Q9Y512 469 aa16.86■□□□□ 0.29
PSME4-201ENST00000389993 HMGN5P82970 282 aaKnown RBP16.86■□□□□ 0.29
PSME4-201ENST00000389993 KIAA1328Q86T90 577 aa16.86■□□□□ 0.29
PSME4-201ENST00000389993 B4E1Z4 1266 aa16.85■□□□□ 0.29
PSME4-201ENST00000389993 TNNI3KQ59H18 835 aa16.85■□□□□ 0.29
PSME4-201ENST00000389993 FPGT-TNNI3KV9GXZ4 949 aa16.85■□□□□ 0.29
PSME4-201ENST00000389993 C16orf45Q96MC5 204 aaPredicted RBP16.85■□□□□ 0.29
PSME4-201ENST00000389993 XAGE2Q96GT9 111 aa16.85■□□□□ 0.29
PSME4-201ENST00000389993 ARGLU1Q9NWB6 273 aaPredicted RBP16.85■□□□□ 0.29
PSME4-201ENST00000389993 CTDSPL2Q05D32 466 aa16.85■□□□□ 0.29
PSME4-201ENST00000389993 RTN1Q16799 776 aa16.85■□□□□ 0.29
PSME4-201ENST00000389993 PRKCSHP14314 528 aaPredicted RBP16.85■□□□□ 0.29
PSME4-201ENST00000389993 CCDC112Q8NEF3 446 aa16.84■□□□□ 0.29
PSME4-201ENST00000389993 CHAMP1Q96JM3 812 aa16.84■□□□□ 0.29
PSME4-201ENST00000389993 ROBO2Q9HCK4 1378 aa16.84■□□□□ 0.29
PSME4-201ENST00000389993 TPTE2Q6XPS3 522 aa16.84■□□□□ 0.29
PSME4-201ENST00000389993 SCLT1Q96NL6 688 aa16.84■□□□□ 0.29
PSME4-201ENST00000389993 ANO10Q9NW15 660 aa16.84■□□□□ 0.29
PSME4-201ENST00000389993 SMTNL1A8MU46 457 aa16.84■□□□□ 0.29
PSME4-201ENST00000389993 CCDC181Q5TID7 509 aa16.84■□□□□ 0.29
PSME4-201ENST00000389993 PLBD2Q8NHP8 589 aa16.84■□□□□ 0.29
PSME4-201ENST00000389993 KDM5CP41229 1560 aa16.83■□□□□ 0.29
PSME4-201ENST00000389993 TRAPPC3LQ5T215 181 aa16.83■□□□□ 0.29
PSME4-201ENST00000389993 FAM170AA1A519 330 aa16.83■□□□□ 0.28
PSME4-201ENST00000389993 CBFA2T2O43439 604 aa16.83■□□□□ 0.28
PSME4-201ENST00000389993 ANO6Q4KMQ2 910 aa16.83■□□□□ 0.28
PSME4-201ENST00000389993 SEC62Q99442 399 aaKnown RBP16.83■□□□□ 0.28
PSME4-201ENST00000389993 SPECC1Q5M775 1068 aa16.82■□□□□ 0.28
PSME4-201ENST00000389993 EPB41L2O43491 1005 aaKnown RBP16.82■□□□□ 0.28
PSME4-201ENST00000389993 DACT1Q9NYF0 836 aa16.82■□□□□ 0.28
PSME4-201ENST00000389993 HMG20BQ9P0W2 317 aa16.82■□□□□ 0.28
PSME4-201ENST00000389993 RUFY3Q7L099 469 aa16.82■□□□□ 0.28
PSME4-201ENST00000389993 AATFQ9NY61 560 aaKnown RBP eCLIP16.82■□□□□ 0.28
PSME4-201ENST00000389993 NUP88Q99567 741 aaPredicted RBP16.82■□□□□ 0.28
PSME4-201ENST00000389993 ERVK-7P63135 1459 aa16.82■□□□□ 0.28
PSME4-201ENST00000389993 ARHGEF5Q12774 1597 aa16.82■□□□□ 0.28
PSME4-201ENST00000389993 SPATA31E1Q6ZUB1 1445 aa16.81■□□□□ 0.28
PSME4-201ENST00000389993 KIF1BO60333 1816 aa16.81■□□□□ 0.28
PSME4-201ENST00000389993 CMTR1Q8N1G2 835 aaKnown RBP16.81■□□□□ 0.28
PSME4-201ENST00000389993 DNAJC25Q9H1X3 360 aa16.81■□□□□ 0.28
PSME4-201ENST00000389993 ZYXQ15942 572 aaKnown RBP16.81■□□□□ 0.28
PSME4-201ENST00000389993 CUL5Q93034 780 aa16.81■□□□□ 0.28
PSME4-201ENST00000389993 PLEKHF1Q96S99 279 aa16.81■□□□□ 0.28
PSME4-201ENST00000389993 PRR36Q9H6K5 1346 aa16.81■□□□□ 0.28
PSME4-201ENST00000389993 TOP1P11387 765 aaKnown RBP16.81■□□□□ 0.28
PSME4-201ENST00000389993 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.81■□□□□ 0.287e-6■□□□□ 8.3
PSME4-201ENST00000389993 UFL1O94874 794 aa16.81■□□□□ 0.28
PSME4-201ENST00000389993 HLA-DOAP06340 250 aa16.81■□□□□ 0.28
PSME4-201ENST00000389993 AXDND1Q5T1B0 1012 aaPredicted RBP16.81■□□□□ 0.28
PSME4-201ENST00000389993 WWC2Q6AWC2 1192 aa16.81■□□□□ 0.28
PSME4-201ENST00000389993 USP21Q9UK80 565 aa16.81■□□□□ 0.28
PSME4-201ENST00000389993 PARP3Q9Y6F1 533 aa16.81■□□□□ 0.28
PSME4-201ENST00000389993 KDM2BQ8NHM5 1336 aa16.81■□□□□ 0.28
PSME4-201ENST00000389993 F13A1P00488 732 aa16.8■□□□□ 0.28
PSME4-201ENST00000389993 MCM7P33993 719 aa16.8■□□□□ 0.28
PSME4-201ENST00000389993 ZAP70P43403 619 aa16.8■□□□□ 0.28
PSME4-201ENST00000389993 HSP90B2PQ58FF3 399 aa16.8■□□□□ 0.28
PSME4-201ENST00000389993 PKD2L1Q9P0L9 805 aa16.8■□□□□ 0.28
PSME4-201ENST00000389993 CCDC171Q6TFL3 1326 aa16.8■□□□□ 0.28
PSME4-201ENST00000389993 PTPDC1A2A3K4 754 aa16.8■□□□□ 0.28
PSME4-201ENST00000389993 SMARCC1Q92922 1105 aaPredicted RBP16.8■□□□□ 0.28
PSME4-201ENST00000389993 GCKRQ14397 625 aa16.8■□□□□ 0.28
PSME4-201ENST00000389993 SLF2Q8IX21 1173 aa16.8■□□□□ 0.28
PSME4-201ENST00000389993 ZC3H12CQ9C0D7 883 aaKnown RBP16.8■□□□□ 0.28
PSME4-201ENST00000389993 ASAP1Q9ULH1 1129 aa16.8■□□□□ 0.28
PSME4-201ENST00000389993 ZNF165P49910 485 aa16.8■□□□□ 0.28
PSME4-201ENST00000389993 PLS1Q14651 629 aa16.8■□□□□ 0.28
PSME4-201ENST00000389993 TAF3Q5VWG9 929 aa16.8■□□□□ 0.28
PSME4-201ENST00000389993 TCERG1LQ5VWI1 586 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms