RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 ZBTB43O43298 467 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 MCM5P33992 734 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 CDR1P51861 262 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 AKNAD1Q5T1N1 836 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 IPO4Q8TEX9 1081 aaKnown RBP5.75□□□□□ -1.49
LTN1-202ENST00000389194 KIAA0754O94854 1291 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 HEATR3Q7Z4Q2 680 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 MAGEB6Q8N7X4 407 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 WASF1Q92558 559 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 DBNDD2Q9BQY9 259 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 PALD1Q9ULE6 856 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 PTPDC1A2A3K4 754 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 RRAGBQ5VZM2 374 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 CCDC102BQ68D86 513 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 KSR2Q6VAB6 950 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 GTF3C6Q969F1 213 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 HINFPQ9BQA5 517 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 ZKSCAN5Q9Y2L8 839 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 UBA7P41226 1012 aa5.74□□□□□ -1.49
LTN1-202ENST00000389194 SYT10Q6XYQ8 523 aa5.74□□□□□ -1.49
LTN1-202ENST00000389194 ORAI2Q96SN7 254 aa5.74□□□□□ -1.49
LTN1-202ENST00000389194 TAF5LO75529 589 aa5.74□□□□□ -1.49
LTN1-202ENST00000389194 A1BGP04217 495 aa5.74□□□□□ -1.49
LTN1-202ENST00000389194 KCNA6P17658 529 aa5.74□□□□□ -1.49
LTN1-202ENST00000389194 WTAPQ15007 396 aa5.74□□□□□ -1.49
LTN1-202ENST00000389194 RNF187Q5TA31 235 aaPredicted RBP5.74□□□□□ -1.49
LTN1-202ENST00000389194 SEC62Q99442 399 aaKnown RBP5.74□□□□□ -1.49
LTN1-202ENST00000389194 CEP131Q9UPN4 1083 aa5.74□□□□□ -1.49
LTN1-202ENST00000389194 EIF3JO75822 258 aaKnown RBP5.74□□□□□ -1.49
LTN1-202ENST00000389194 U2AF2P26368 475 aaKnown RBP eCLIP5.74□□□□□ -1.493e-6■■■■■ 27
LTN1-202ENST00000389194 CCT6AP40227 531 aaKnown RBP5.74□□□□□ -1.49
LTN1-202ENST00000389194 RNASE9P60153 205 aaKnown RBP5.74□□□□□ -1.49
LTN1-202ENST00000389194 RHOXF2BP0C7M4 288 aa5.74□□□□□ -1.49
LTN1-202ENST00000389194 GSPT1P15170 499 aaKnown RBP5.74□□□□□ -1.49
LTN1-202ENST00000389194 MCM7P33993 719 aa5.74□□□□□ -1.49
LTN1-202ENST00000389194 EIF6P56537 245 aaKnown RBP5.74□□□□□ -1.49
LTN1-202ENST00000389194 SEPT7Q16181 437 aaKnown RBP5.74□□□□□ -1.49
LTN1-202ENST00000389194 CCDC148Q8NFR7 591 aa5.74□□□□□ -1.49
LTN1-202ENST00000389194 TAF4BQ92750 862 aa5.74□□□□□ -1.49
LTN1-202ENST00000389194 PHKBQ93100 1093 aa5.74□□□□□ -1.49
LTN1-202ENST00000389194 EEF2KMTQ96G04 330 aa5.74□□□□□ -1.49
LTN1-202ENST00000389194 TRIM47Q96LD4 638 aa5.74□□□□□ -1.49
LTN1-202ENST00000389194 RHOXF2Q9BQY4 288 aa5.74□□□□□ -1.49
LTN1-202ENST00000389194 B4E1Z4 1266 aa5.74□□□□□ -1.49
LTN1-202ENST00000389194 ZSCAN12O43309 604 aa5.74□□□□□ -1.49
LTN1-202ENST00000389194 HMGB1P09429 215 aaKnown RBP5.74□□□□□ -1.49
LTN1-202ENST00000389194 ATP6V1AP38606 617 aa5.74□□□□□ -1.49
LTN1-202ENST00000389194 GAS2L3Q86XJ1 694 aa5.74□□□□□ -1.49
LTN1-202ENST00000389194 USP19O94966 1318 aa5.74□□□□□ -1.49
LTN1-202ENST00000389194 FAM200AQ8TCP9 573 aa5.74□□□□□ -1.49
LTN1-202ENST00000389194 TMEM63CQ9P1W3 806 aa5.74□□□□□ -1.49
LTN1-202ENST00000389194 IL16Q14005 1332 aa5.74□□□□□ -1.49
LTN1-202ENST00000389194 PLS1Q14651 629 aa5.73□□□□□ -1.49
LTN1-202ENST00000389194 CDC37L1Q7L3B6 337 aa5.73□□□□□ -1.49
LTN1-202ENST00000389194 RGS22Q8NE09 1264 aa5.73□□□□□ -1.49
LTN1-202ENST00000389194 SNX21Q969T3 373 aa5.73□□□□□ -1.49
LTN1-202ENST00000389194 NIP7Q9Y221 180 aaKnown RBP eCLIP5.73□□□□□ -1.49
LTN1-202ENST00000389194 RAPGEF6Q8TEU7 1601 aa5.73□□□□□ -1.49
LTN1-202ENST00000389194 TRIM21P19474 475 aaKnown RBP5.73□□□□□ -1.49
LTN1-202ENST00000389194 IFIT1BQ5T764 474 aaKnown RBP5.73□□□□□ -1.49
LTN1-202ENST00000389194 ZNF397Q8NF99 534 aaPredicted RBP5.73□□□□□ -1.49
LTN1-202ENST00000389194 ARHGAP45Q92619 1136 aa5.73□□□□□ -1.49
LTN1-202ENST00000389194 RPGRQ92834 1020 aaKnown RBP5.73□□□□□ -1.49
LTN1-202ENST00000389194 UTP14AQ9BVJ6 771 aaKnown RBP5.73□□□□□ -1.49
LTN1-202ENST00000389194 SAMM50Q9Y512 469 aa5.73□□□□□ -1.49
LTN1-202ENST00000389194 BIVM-ERCC5R4GMW8 1640 aa5.73□□□□□ -1.49
LTN1-202ENST00000389194 PZPP20742 1482 aa5.73□□□□□ -1.49
LTN1-202ENST00000389194 RIMBP2O15034 1052 aa5.73□□□□□ -1.49
LTN1-202ENST00000389194 COBLO75128 1261 aa5.73□□□□□ -1.49
LTN1-202ENST00000389194 CCDC40Q4G0X9 1142 aa5.73□□□□□ -1.49
LTN1-202ENST00000389194 RUFY3Q7L099 469 aa5.73□□□□□ -1.49
LTN1-202ENST00000389194 CCDC196A0A1B0GTZ2 297 aa5.73□□□□□ -1.49
LTN1-202ENST00000389194 RTN1Q16799 776 aa5.73□□□□□ -1.49
LTN1-202ENST00000389194 ZCRB1Q8TBF4 217 aaKnown RBP5.73□□□□□ -1.49
LTN1-202ENST00000389194 MRPS27Q92552 414 aaKnown RBP5.73□□□□□ -1.49
LTN1-202ENST00000389194 SIRT1Q96EB6 747 aa5.73□□□□□ -1.49
LTN1-202ENST00000389194 KAT14Q9H8E8 782 aa5.73□□□□□ -1.49
LTN1-202ENST00000389194 SAP30BPQ9UHR5 308 aaKnown RBP5.73□□□□□ -1.49
LTN1-202ENST00000389194 SERPINA10Q9UK55 444 aa5.73□□□□□ -1.49
LTN1-202ENST00000389194 SNX14Q9Y5W7 946 aa5.73□□□□□ -1.49
LTN1-202ENST00000389194 SPTLC2O15270 562 aa5.73□□□□□ -1.49
LTN1-202ENST00000389194 CCDC191Q8NCU4 936 aa5.73□□□□□ -1.49
LTN1-202ENST00000389194 PSMB7Q99436 277 aa5.73□□□□□ -1.49
LTN1-202ENST00000389194 UBE4AQ14139 1066 aa5.73□□□□□ -1.49
LTN1-202ENST00000389194 ZNF174Q15697 407 aa5.73□□□□□ -1.49
LTN1-202ENST00000389194 DYDC1Q8WWB3 177 aa5.73□□□□□ -1.49
LTN1-202ENST00000389194 PODXL2Q9NZ53 605 aa5.73□□□□□ -1.49
LTN1-202ENST00000389194 RTL1A6NKG5 1358 aa5.73□□□□□ -1.49
LTN1-202ENST00000389194 SMIM23A6NLE4 172 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 POLR3AO14802 1390 aaPredicted RBP5.72□□□□□ -1.49
LTN1-202ENST00000389194 GCP02774 474 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 SOS1Q07889 1333 aaPredicted RBP5.72□□□□□ -1.49
LTN1-202ENST00000389194 GUCA1BQ9UMX6 200 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 HOXC9P31274 260 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 NBPF6Q5VWK0 638 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 NBPF5PQ86XG9 351 aaPredicted RBP5.72□□□□□ -1.49
LTN1-202ENST00000389194 UNC5CLQ8IV45 518 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 NBPF4Q96M43 638 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 CABP5Q9NP86 173 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 PKD2L1Q9P0L9 805 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms