RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 NECTIN2Q92692 538 aa22.83■■□□□ 1.25
HMGN1-203ENST00000380748 REM2Q8IYK8 340 aaPredicted RBP22.81■■□□□ 1.24
HMGN1-203ENST00000380748 EYA3Q99504 573 aa22.8■■□□□ 1.24
HMGN1-203ENST00000380748 PAPPA2Q9BXP8 1791 aa22.79■■□□□ 1.24
HMGN1-203ENST00000380748 VIL1P09327 827 aaKnown RBP22.79■■□□□ 1.24
HMGN1-203ENST00000380748 PKN2Q16513 984 aaKnown RBP22.79■■□□□ 1.24
HMGN1-203ENST00000380748 ANGEL2Q5VTE6 544 aaKnown RBP22.79■■□□□ 1.24
HMGN1-203ENST00000380748 TBC1D16Q8TBP0 767 aa22.79■■□□□ 1.24
HMGN1-203ENST00000380748 ZNF296Q8WUU4 475 aaPredicted RBP22.79■■□□□ 1.24
HMGN1-203ENST00000380748 HDAC9Q9UKV0 1011 aa22.79■■□□□ 1.24
HMGN1-203ENST00000380748 TBC1D8O95759 1140 aa22.78■■□□□ 1.24
HMGN1-203ENST00000380748 SF3B3Q15393 1217 aaKnown RBP22.78■■□□□ 1.24
HMGN1-203ENST00000380748 SCARF1Q14162 830 aa22.77■■□□□ 1.24
HMGN1-203ENST00000380748 MOB2Q70IA6 237 aa22.77■■□□□ 1.24
HMGN1-203ENST00000380748 FAM89AQ96GI7 184 aa22.77■■□□□ 1.24
HMGN1-203ENST00000380748 MAPK8IP3Q9UPT6 1336 aa22.77■■□□□ 1.24
HMGN1-203ENST00000380748 SCAF8Q9UPN6 1271 aaKnown RBP22.76■■□□□ 1.23
HMGN1-203ENST00000380748 ZNF280AP59817 542 aaPredicted RBP22.75■■□□□ 1.23
HMGN1-203ENST00000380748 FKBP1BP68106 108 aa22.75■■□□□ 1.23
HMGN1-203ENST00000380748 MKI67P46013 3256 aaKnown RBP22.74■■□□□ 1.23
HMGN1-203ENST00000380748 RTL5Q5HYW3 569 aaPredicted RBP22.74■■□□□ 1.23
HMGN1-203ENST00000380748 ZC3H12CQ9C0D7 883 aaKnown RBP22.74■■□□□ 1.23
HMGN1-203ENST00000380748 ATP5J2-PTCD1G3V325 749 aa22.73■■□□□ 1.23
HMGN1-203ENST00000380748 KRT24Q2M2I5 525 aa22.73■■□□□ 1.23
HMGN1-203ENST00000380748 ISCA1Q9BUE6 129 aa22.73■■□□□ 1.23
HMGN1-203ENST00000380748 ZNF609O15014 1411 aa22.73■■□□□ 1.23
HMGN1-203ENST00000380748 HTTP42858 3142 aa22.72■■□□□ 1.23
HMGN1-203ENST00000380748 UBE2Q2LH0YL09 131 aa22.72■■□□□ 1.23
HMGN1-203ENST00000380748 UFL1O94874 794 aa22.72■■□□□ 1.23
HMGN1-203ENST00000380748 RPS8P62241 208 aaKnown RBP22.72■■□□□ 1.23
HMGN1-203ENST00000380748 RSBN1LQ6PCB5 846 aaPredicted RBP22.72■■□□□ 1.23
HMGN1-203ENST00000380748 CHPF2Q9P2E5 772 aa22.72■■□□□ 1.23
HMGN1-203ENST00000380748 G3V3G9 751 aa22.71■■□□□ 1.23
HMGN1-203ENST00000380748 GPR25O00155 361 aa22.71■■□□□ 1.23
HMGN1-203ENST00000380748 DCAF8Q5TAQ9 597 aa22.71■■□□□ 1.23
HMGN1-203ENST00000380748 FBXO46Q6PJ61 603 aaPredicted RBP22.71■■□□□ 1.23
HMGN1-203ENST00000380748 AGBL3Q8NEM8 1001 aa22.71■■□□□ 1.23
HMGN1-203ENST00000380748 PLBD2Q8NHP8 589 aa22.71■■□□□ 1.23
HMGN1-203ENST00000380748 BABAM1Q9NWV8 329 aa22.71■■□□□ 1.23
HMGN1-203ENST00000380748 PODXL2Q9NZ53 605 aa22.71■■□□□ 1.23
HMGN1-203ENST00000380748 PSME4Q14997 1843 aa22.71■■□□□ 1.23
HMGN1-203ENST00000380748 RIPK4P57078 832 aa22.7■■□□□ 1.22
HMGN1-203ENST00000380748 PRAMEF18Q5VWM3 479 aa22.7■■□□□ 1.22
HMGN1-203ENST00000380748 MYOZ2Q9NPC6 264 aa22.7■■□□□ 1.22
HMGN1-203ENST00000380748 PITPNM2Q9BZ72 1349 aa22.7■■□□□ 1.22
HMGN1-203ENST00000380748 IRS4O14654 1257 aaPredicted RBP22.69■■□□□ 1.22
HMGN1-203ENST00000380748 MKRN3Q13064 507 aaKnown RBP22.69■■□□□ 1.22
HMGN1-203ENST00000380748 GCC1Q96CN9 775 aa22.69■■□□□ 1.22
HMGN1-203ENST00000380748 GMLQ99445 158 aa22.69■■□□□ 1.22
HMGN1-203ENST00000380748 PNNQ9H307 717 aaKnown RBP22.69■■□□□ 1.22
HMGN1-203ENST00000380748 SEC31BQ9NQW1 1179 aa22.69■■□□□ 1.22
HMGN1-203ENST00000380748 ANKIB1Q9P2G1 1089 aa22.69■■□□□ 1.22
HMGN1-203ENST00000380748 USP17L8P0C7I0 530 aa22.68■■□□□ 1.22
HMGN1-203ENST00000380748 TM4SF4P48230 202 aa22.68■■□□□ 1.22
HMGN1-203ENST00000380748 ANKRD13DQ6ZTN6 518 aa22.68■■□□□ 1.22
HMGN1-203ENST00000380748 GGA1Q9UJY5 639 aa22.68■■□□□ 1.22
HMGN1-203ENST00000380748 NOM1Q5C9Z4 860 aaKnown RBP22.67■■□□□ 1.22
HMGN1-203ENST00000380748 R3HDMLQ9H3Y0 253 aa22.67■■□□□ 1.22
HMGN1-203ENST00000380748 TTLL12Q14166 644 aaPredicted RBP22.66■■□□□ 1.22
HMGN1-203ENST00000380748 HABP4Q5JVS0 413 aaKnown RBP22.66■■□□□ 1.22
HMGN1-203ENST00000380748 FKTNO75072 461 aa22.65■■□□□ 1.22
HMGN1-203ENST00000380748 CENPFP49454 3210 aa22.65■■□□□ 1.22
HMGN1-203ENST00000380748 NBPF9Q3BBW0 867 aa22.64■■□□□ 1.21
HMGN1-203ENST00000380748 HDGFL1Q5TGJ6 251 aa22.64■■□□□ 1.21
HMGN1-203ENST00000380748 TMPOP42166 694 aaKnown RBP22.63■■□□□ 1.21
HMGN1-203ENST00000380748 USP17L3A6NCW0 530 aa22.62■■□□□ 1.21
HMGN1-203ENST00000380748 USP17L4A6NCW7 530 aa22.62■■□□□ 1.21
HMGN1-203ENST00000380748 CHL1O00533 1208 aa22.62■■□□□ 1.21
HMGN1-203ENST00000380748 LMOD3Q0VAK6 560 aa22.62■■□□□ 1.21
HMGN1-203ENST00000380748 SREBF2Q12772 1141 aa22.62■■□□□ 1.21
HMGN1-203ENST00000380748 TRIM28Q13263 835 aaKnown RBP22.62■■□□□ 1.21
HMGN1-203ENST00000380748 USP17L1Q7RTZ2 530 aa22.62■■□□□ 1.21
HMGN1-203ENST00000380748 CFHR5Q9BXR6 569 aa22.62■■□□□ 1.21
HMGN1-203ENST00000380748 POTEFA5A3E0 1075 aa22.6■■□□□ 1.21
HMGN1-203ENST00000380748 ZBTB38Q8NAP3 1195 aaPredicted RBP22.6■■□□□ 1.21
HMGN1-203ENST00000380748 CCDC85AQ96PX6 553 aaPredicted RBP22.6■■□□□ 1.21
HMGN1-203ENST00000380748 MXD3Q9BW11 206 aa22.6■■□□□ 1.21
HMGN1-203ENST00000380748 DBF4Q9UBU7 674 aaPredicted RBP22.6■■□□□ 1.21
HMGN1-203ENST00000380748 LAS1LQ9Y4W2 734 aaKnown RBP22.6■■□□□ 1.21
HMGN1-203ENST00000380748 BRCA2P51587 3418 aa22.59■■□□□ 1.21
HMGN1-203ENST00000380748 WTIPA6NIX2 430 aaPredicted RBP22.59■■□□□ 1.21
HMGN1-203ENST00000380748 PTPN12Q05209 780 aaKnown RBP22.59■■□□□ 1.21
HMGN1-203ENST00000380748 ZNF646O15015 1829 aaPredicted RBP22.59■■□□□ 1.21
HMGN1-203ENST00000380748 XDHP47989 1333 aa22.58■■□□□ 1.21
HMGN1-203ENST00000380748 WNT10BO00744 389 aa22.58■■□□□ 1.21
HMGN1-203ENST00000380748 NF2P35240 595 aa22.58■■□□□ 1.21
HMGN1-203ENST00000380748 PRKG1Q13976 671 aa22.58■■□□□ 1.21
HMGN1-203ENST00000380748 PODNQ7Z5L7 613 aa22.58■■□□□ 1.21
HMGN1-203ENST00000380748 CCDC152Q4G0S7 254 aa22.57■■□□□ 1.2
HMGN1-203ENST00000380748 HYPKQ9NX55 129 aa22.57■■□□□ 1.2
HMGN1-203ENST00000380748 TRIM17Q9Y577 477 aa22.57■■□□□ 1.2
HMGN1-203ENST00000380748 SASH1O94885 1247 aa22.56■■□□□ 1.2
HMGN1-203ENST00000380748 HOXB7P09629 217 aa22.56■■□□□ 1.2
HMGN1-203ENST00000380748 ATP2B4P23634 1241 aa22.56■■□□□ 1.2
HMGN1-203ENST00000380748 NEUROD2Q15784 382 aa22.56■■□□□ 1.2
HMGN1-203ENST00000380748 DACT2Q5SW24 774 aa22.56■■□□□ 1.2
HMGN1-203ENST00000380748 SPRYD7Q5W111 196 aa22.56■■□□□ 1.2
HMGN1-203ENST00000380748 JARID2Q92833 1246 aaPredicted RBP22.56■■□□□ 1.2
HMGN1-203ENST00000380748 KIAA0100Q14667 2235 aaKnown RBP22.55■■□□□ 1.2
HMGN1-203ENST00000380748 OTOP1Q7RTM1 612 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms