RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 CYP7A1P22680 504 aa20.67■□□□□ 0.9
UBL3-201ENST00000380680 UTP14AQ9BVJ6 771 aaKnown RBP20.67■□□□□ 0.9
UBL3-201ENST00000380680 CEP131Q9UPN4 1083 aa20.67■□□□□ 0.9
UBL3-201ENST00000380680 A0A0U1RQG5 324 aaPredicted RBP20.67■□□□□ 0.9
UBL3-201ENST00000380680 ZBTB43O43298 467 aa20.67■□□□□ 0.9
UBL3-201ENST00000380680 CD2BP2O95400 341 aaKnown RBP20.66■□□□□ 0.9
UBL3-201ENST00000380680 ZSCAN29Q8IWY8 852 aaPredicted RBP20.66■□□□□ 0.9
UBL3-201ENST00000380680 GOLGA6L1Q8N7Z2 621 aa20.66■□□□□ 0.9
UBL3-201ENST00000380680 CCDC112Q8NEF3 446 aa20.66■□□□□ 0.9
UBL3-201ENST00000380680 SETD1BQ9UPS6 1966 aaKnown RBP20.66■□□□□ 0.9
UBL3-201ENST00000380680 SLC4A8Q2Y0W8 1093 aa20.65■□□□□ 0.9
UBL3-201ENST00000380680 FAM173BQ6P4H8 233 aa20.65■□□□□ 0.9
UBL3-201ENST00000380680 CATIPQ7Z7H3 387 aa20.65■□□□□ 0.9
UBL3-201ENST00000380680 FAM177A1Q8N128 213 aaPredicted RBP20.65■□□□□ 0.9
UBL3-201ENST00000380680 KDRP35968 1356 aa20.65■□□□□ 0.9
UBL3-201ENST00000380680 TTLL7Q6ZT98 887 aa20.65■□□□□ 0.9
UBL3-201ENST00000380680 KBTBD3Q8NAB2 608 aa20.65■□□□□ 0.9
UBL3-201ENST00000380680 SLC4A4Q9Y6R1 1079 aa20.65■□□□□ 0.9
UBL3-201ENST00000380680 PTCH1Q13635 1447 aa20.65■□□□□ 0.9
UBL3-201ENST00000380680 KIDINS220Q9ULH0 1771 aa20.65■□□□□ 0.9
UBL3-201ENST00000380680 OSBPL3Q9H4L5 887 aa20.65■□□□□ 0.9
UBL3-201ENST00000380680 RPS6KB1P23443 525 aa20.64■□□□□ 0.9
UBL3-201ENST00000380680 CLIP2Q9UDT6 1046 aa20.64■□□□□ 0.9
UBL3-201ENST00000380680 CBFA2T2O43439 604 aa20.64■□□□□ 0.89
UBL3-201ENST00000380680 ITGA6P23229 1130 aa20.64■□□□□ 0.89
UBL3-201ENST00000380680 PPFIBP1Q86W92 1011 aa20.64■□□□□ 0.89
UBL3-201ENST00000380680 ALG1Q9BT22 464 aa20.64■□□□□ 0.89
UBL3-201ENST00000380680 PDE4CQ08493 712 aa20.64■□□□□ 0.89
UBL3-201ENST00000380680 PKP1Q13835 747 aa20.64■□□□□ 0.89
UBL3-201ENST00000380680 ISM2Q6H9L7 571 aa20.64■□□□□ 0.89
UBL3-201ENST00000380680 ZNF444Q8N0Y2 327 aaPredicted RBP20.64■□□□□ 0.89
UBL3-201ENST00000380680 CNNM3Q8NE01 707 aa20.64■□□□□ 0.89
UBL3-201ENST00000380680 MAGEC2Q9UBF1 373 aaPredicted RBP20.64■□□□□ 0.89
UBL3-201ENST00000380680 UVSSAQ2YD98 709 aa20.64■□□□□ 0.89
UBL3-201ENST00000380680 SMARCC1Q92922 1105 aaPredicted RBP20.64■□□□□ 0.89
UBL3-201ENST00000380680 STAP2Q9UGK3 403 aa20.64■□□□□ 0.89
UBL3-201ENST00000380680 PTPDC1A2A3K4 754 aa20.63■□□□□ 0.89
UBL3-201ENST00000380680 WTAPQ15007 396 aa20.63■□□□□ 0.89
UBL3-201ENST00000380680 KLHL10Q6JEL2 608 aa20.63■□□□□ 0.89
UBL3-201ENST00000380680 RPGRQ92834 1020 aaKnown RBP20.63■□□□□ 0.89
UBL3-201ENST00000380680 NLRP3Q96P20 1036 aa20.63■□□□□ 0.89
UBL3-201ENST00000380680 ERBB3P21860 1342 aa20.63■□□□□ 0.89
UBL3-201ENST00000380680 DIP2CQ9Y2E4 1556 aa20.63■□□□□ 0.89
UBL3-201ENST00000380680 PTH1RQ03431 593 aa20.63■□□□□ 0.89
UBL3-201ENST00000380680 XAGE2Q96GT9 111 aa20.63■□□□□ 0.89
UBL3-201ENST00000380680 C8orf37Q96NL8 207 aa20.63■□□□□ 0.89
UBL3-201ENST00000380680 MAP7D2Q96T17 732 aa20.63■□□□□ 0.89
UBL3-201ENST00000380680 SETDB2Q96T68 719 aa20.63■□□□□ 0.89
UBL3-201ENST00000380680 RFC4P35249 363 aa20.62■□□□□ 0.89
UBL3-201ENST00000380680 NPHP4O75161 1426 aaPredicted RBP20.62■□□□□ 0.89
UBL3-201ENST00000380680 POLR1AO95602 1720 aaPredicted RBP20.62■□□□□ 0.89
UBL3-201ENST00000380680 C6orf229H3BNL8 230 aa20.62■□□□□ 0.89
UBL3-201ENST00000380680 CCDC43Q96MW1 224 aaKnown RBP20.62■□□□□ 0.89
UBL3-201ENST00000380680 ZNF287Q9HBT7 754 aa20.62■□□□□ 0.89
UBL3-201ENST00000380680 HELLSQ9NRZ9 838 aa20.62■□□□□ 0.89
UBL3-201ENST00000380680 ARHGEF40Q8TER5 1519 aa20.62■□□□□ 0.89
UBL3-201ENST00000380680 TSPY2A6NKD2 308 aa20.62■□□□□ 0.89
UBL3-201ENST00000380680 SMARCE1Q969G3 411 aa20.62■□□□□ 0.89
UBL3-201ENST00000380680 PTPRMP28827 1452 aa20.62■□□□□ 0.89
UBL3-201ENST00000380680 CAMSAP1Q5T5Y3 1602 aa20.62■□□□□ 0.89
UBL3-201ENST00000380680 SFPQP23246 707 aaKnown RBP eCLIP20.62■□□□□ 0.89
UBL3-201ENST00000380680 NAP1L1P55209 391 aaKnown RBP20.62■□□□□ 0.89
UBL3-201ENST00000380680 AK7Q96M32 723 aa20.62■□□□□ 0.89
UBL3-201ENST00000380680 STIM1Q13586 685 aa20.61■□□□□ 0.89
UBL3-201ENST00000380680 MTERF4Q7Z6M4 381 aaKnown RBP20.61■□□□□ 0.89
UBL3-201ENST00000380680 MIGA1Q8NAN2 632 aa20.61■□□□□ 0.89
UBL3-201ENST00000380680 ZNF830Q96NB3 372 aaPredicted RBP20.61■□□□□ 0.89
UBL3-201ENST00000380680 ERVV-2B6SEH9 535 aa20.61■□□□□ 0.89
UBL3-201ENST00000380680 ATP5JP18859 108 aa20.61■□□□□ 0.89
UBL3-201ENST00000380680 STX1AQ16623 288 aa20.61■□□□□ 0.89
UBL3-201ENST00000380680 CCP110O43303 1012 aa20.61■□□□□ 0.89
UBL3-201ENST00000380680 TOM1O60784 492 aa20.61■□□□□ 0.89
UBL3-201ENST00000380680 LMBRD1Q9NUN5 540 aa20.61■□□□□ 0.89
UBL3-201ENST00000380680 ARGLU1Q9NWB6 273 aaPredicted RBP20.61■□□□□ 0.89
UBL3-201ENST00000380680 CPSF1Q10570 1443 aaKnown RBP20.6■□□□□ 0.89
UBL3-201ENST00000380680 DHX8Q14562 1220 aaKnown RBP20.6■□□□□ 0.89
UBL3-201ENST00000380680 CCDC70Q6NSX1 233 aa20.6■□□□□ 0.89
UBL3-201ENST00000380680 MAGEB6Q8N7X4 407 aa20.6■□□□□ 0.89
UBL3-201ENST00000380680 MED14O60244 1454 aa20.6■□□□□ 0.89
UBL3-201ENST00000380680 NLRP5P59047 1200 aa20.6■□□□□ 0.89
UBL3-201ENST00000380680 ANO6Q4KMQ2 910 aa20.6■□□□□ 0.89
UBL3-201ENST00000380680 CEP89Q96ST8 783 aa20.6■□□□□ 0.89
UBL3-201ENST00000380680 KRT23Q9C075 422 aa20.6■□□□□ 0.89
UBL3-201ENST00000380680 SH3TC1Q8TE82 1336 aa20.6■□□□□ 0.89
UBL3-201ENST00000380680 LRRC7Q96NW7 1537 aa20.6■□□□□ 0.89
UBL3-201ENST00000380680 A0A0D9SFI3 127 aa20.6■□□□□ 0.89
UBL3-201ENST00000380680 UBAP1LF5GYI3 381 aa20.6■□□□□ 0.89
UBL3-201ENST00000380680 RXRAP19793 462 aa20.6■□□□□ 0.89
UBL3-201ENST00000380680 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.6■□□□□ 0.89
UBL3-201ENST00000380680 OFD1O75665 1012 aa20.6■□□□□ 0.89
UBL3-201ENST00000380680 FAM200AQ8TCP9 573 aa20.6■□□□□ 0.89
UBL3-201ENST00000380680 KRT18P05783 430 aaKnown RBP20.59■□□□□ 0.89
UBL3-201ENST00000380680 NEXMIFQ5QGS0 1516 aa20.59■□□□□ 0.89
UBL3-201ENST00000380680 NAA16Q6N069 864 aaPredicted RBP20.59■□□□□ 0.89
UBL3-201ENST00000380680 ANTXR1Q9H6X2 564 aa20.59■□□□□ 0.89
UBL3-201ENST00000380680 EPB41L2O43491 1005 aaKnown RBP20.59■□□□□ 0.89
UBL3-201ENST00000380680 SSBP05455 408 aaKnown RBP eCLIP20.59■□□□□ 0.89
UBL3-201ENST00000380680 MARCKSP29966 332 aaPredicted RBP20.59■□□□□ 0.89
UBL3-201ENST00000380680 EPS15P42566 896 aa20.58■□□□□ 0.89
UBL3-201ENST00000380680 TCIRG1Q13488 830 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms