RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 CNTROBQ8N137 903 aa31.37■■■□□ 2.61
TNFRSF4-201ENST00000379236 GREM2Q9H772 168 aa31.37■■■□□ 2.61
TNFRSF4-201ENST00000379236 PASKQ96RG2 1323 aa31.37■■■□□ 2.61
TNFRSF4-201ENST00000379236 XDHP47989 1333 aa31.36■■■□□ 2.61
TNFRSF4-201ENST00000379236 ECE2O60344 883 aa31.36■■■□□ 2.61
TNFRSF4-201ENST00000379236 RTL9Q8NET4 1388 aa31.35■■■□□ 2.61
TNFRSF4-201ENST00000379236 YDJCA8MPS7 323 aa31.35■■■□□ 2.61
TNFRSF4-201ENST00000379236 F6X3S4 739 aa31.35■■■□□ 2.61
TNFRSF4-201ENST00000379236 DOK7Q18PE1 504 aa31.35■■■□□ 2.61
TNFRSF4-201ENST00000379236 GPR101Q96P66 508 aaPredicted RBP31.35■■■□□ 2.61
TNFRSF4-201ENST00000379236 E9PSI1 815 aa31.34■■■□□ 2.61
TNFRSF4-201ENST00000379236 ITGBL1O95965 494 aaPredicted RBP31.34■■■□□ 2.61
TNFRSF4-201ENST00000379236 IGHMBP2P38935 993 aaKnown RBP31.34■■■□□ 2.61
TNFRSF4-201ENST00000379236 TRPM7Q96QT4 1865 aa31.33■■■□□ 2.61
TNFRSF4-201ENST00000379236 PLA2G12BQ9BX93 195 aa31.33■■■□□ 2.61
TNFRSF4-201ENST00000379236 TMEM88BA6NKF7 163 aa31.32■■■□□ 2.6
TNFRSF4-201ENST00000379236 CCER2I3L3R5 266 aa31.32■■■□□ 2.6
TNFRSF4-201ENST00000379236 ATP2B4P23634 1241 aa31.31■■■□□ 2.6
TNFRSF4-201ENST00000379236 JMYQ8N9B5 988 aa31.31■■■□□ 2.6
TNFRSF4-201ENST00000379236 BSDC1Q9NW68 430 aaPredicted RBP31.31■■■□□ 2.6
TNFRSF4-201ENST00000379236 H7C1D1 291 aa31.3■■■□□ 2.6
TNFRSF4-201ENST00000379236 PSMD14O00487 310 aa31.3■■■□□ 2.6
TNFRSF4-201ENST00000379236 BEND3Q5T5X7 828 aa31.3■■■□□ 2.6
TNFRSF4-201ENST00000379236 SLC4A10Q6U841 1118 aa31.3■■■□□ 2.6
TNFRSF4-201ENST00000379236 MKRN1Q9UHC7 482 aaKnown RBP31.3■■■□□ 2.6
TNFRSF4-201ENST00000379236 PSME4Q14997 1843 aa31.3■■■□□ 2.6
TNFRSF4-201ENST00000379236 SCN9AQ15858 1988 aa31.3■■■□□ 2.6
TNFRSF4-201ENST00000379236 MPHOSPH8Q99549 860 aa31.29■■■□□ 2.6
TNFRSF4-201ENST00000379236 CNOT7Q9UIV1 285 aaKnown RBP31.29■■■□□ 2.6
TNFRSF4-201ENST00000379236 ITGA6P23229 1130 aa31.28■■■□□ 2.6
TNFRSF4-201ENST00000379236 CASP7P55210 303 aa31.28■■■□□ 2.6
TNFRSF4-201ENST00000379236 FAM161AQ3B820 660 aa31.28■■■□□ 2.6
TNFRSF4-201ENST00000379236 ZBTB12Q9Y330 459 aaPredicted RBP31.28■■■□□ 2.6
TNFRSF4-201ENST00000379236 CHMP3Q9Y3E7 222 aa31.28■■■□□ 2.6
TNFRSF4-201ENST00000379236 C9orf78Q9NZ63 289 aaPredicted RBP31.27■■■□□ 2.6
TNFRSF4-201ENST00000379236 MINPP1Q9UNW1 487 aa31.27■■■□□ 2.6
TNFRSF4-201ENST00000379236 RPS12P25398 132 aaKnown RBP31.26■■■□□ 2.59
TNFRSF4-201ENST00000379236 MICALL2Q8IY33 904 aa31.26■■■□□ 2.59
TNFRSF4-201ENST00000379236 ANKRD18BA2A2Z9 1011 aa31.25■■■□□ 2.59
TNFRSF4-201ENST00000379236 DPF2Q92785 391 aa31.25■■■□□ 2.59
TNFRSF4-201ENST00000379236 SRCIN1Q9C0H9 1055 aa31.25■■■□□ 2.59
TNFRSF4-201ENST00000379236 CSF1RP07333 972 aa31.24■■■□□ 2.59
TNFRSF4-201ENST00000379236 SLFN5Q08AF3 891 aa31.24■■■□□ 2.59
TNFRSF4-201ENST00000379236 GRM8O00222 908 aa31.23■■■□□ 2.59
TNFRSF4-201ENST00000379236 ALDH1L1O75891 902 aa31.23■■■□□ 2.59
TNFRSF4-201ENST00000379236 CCT4P50991 539 aaKnown RBP31.23■■■□□ 2.59
TNFRSF4-201ENST00000379236 ANKRD2Q9GZV1 360 aa31.23■■■□□ 2.59
TNFRSF4-201ENST00000379236 KCNQ5Q9NR82 932 aa31.23■■■□□ 2.59
TNFRSF4-201ENST00000379236 ABT1Q9ULW3 272 aaKnown RBP31.23■■■□□ 2.59
TNFRSF4-201ENST00000379236 CNTNAP1P78357 1384 aa31.22■■■□□ 2.59
TNFRSF4-201ENST00000379236 MED23Q9ULK4 1368 aa31.22■■■□□ 2.59
TNFRSF4-201ENST00000379236 IFIT5Q13325 482 aaKnown RBP31.22■■■□□ 2.59
TNFRSF4-201ENST00000379236 TRPM4Q8TD43 1214 aa31.21■■■□□ 2.59
TNFRSF4-201ENST00000379236 ZC3H15Q8WU90 426 aaKnown RBP31.21■■■□□ 2.59
TNFRSF4-201ENST00000379236 A0A1B0GUL6 1792 aa31.2■■■□□ 2.59
TNFRSF4-201ENST00000379236 SHTN1A0MZ66 631 aa31.2■■■□□ 2.59
TNFRSF4-201ENST00000379236 KCNJ4P48050 445 aa31.2■■■□□ 2.59
TNFRSF4-201ENST00000379236 MRPL50Q8N5N7 158 aaKnown RBP31.2■■■□□ 2.59
TNFRSF4-201ENST00000379236 LEMD3Q9Y2U8 911 aa31.2■■■□□ 2.59
TNFRSF4-201ENST00000379236 PTPRCP08575 1304 aa31.2■■■□□ 2.58
TNFRSF4-201ENST00000379236 PCNTO95613 3336 aa31.19■■■□□ 2.58
TNFRSF4-201ENST00000379236 TAF7LQ5H9L4 462 aa31.19■■■□□ 2.58
TNFRSF4-201ENST00000379236 POLR2AP24928 1970 aaKnown RBP31.18■■■□□ 2.58
TNFRSF4-201ENST00000379236 VIL1P09327 827 aaKnown RBP31.18■■■□□ 2.58
TNFRSF4-201ENST00000379236 FOXO4P98177 505 aa31.18■■■□□ 2.58
TNFRSF4-201ENST00000379236 PODNQ7Z5L7 613 aa31.18■■■□□ 2.58
TNFRSF4-201ENST00000379236 TRAF5O00463 557 aa31.17■■■□□ 2.58
TNFRSF4-201ENST00000379236 CCDC57Q2TAC2 916 aa31.17■■■□□ 2.58
TNFRSF4-201ENST00000379236 TBC1D10BQ4KMP7 808 aaPredicted RBP31.17■■■□□ 2.58
TNFRSF4-201ENST00000379236 RBM26Q5T8P6 1007 aaKnown RBP31.17■■■□□ 2.58
TNFRSF4-201ENST00000379236 LMBR1LQ6UX01 489 aa31.17■■■□□ 2.58
TNFRSF4-201ENST00000379236 SAMD7Q7Z3H4 446 aa31.17■■■□□ 2.58
TNFRSF4-201ENST00000379236 CDCA7LQ96GN5 454 aa31.17■■■□□ 2.58
TNFRSF4-201ENST00000379236 HIRAP54198 1017 aaPredicted RBP31.16■■■□□ 2.58
TNFRSF4-201ENST00000379236 DEFB115Q30KQ5 88 aa31.16■■■□□ 2.58
TNFRSF4-201ENST00000379236 RSBN1LQ6PCB5 846 aaPredicted RBP31.16■■■□□ 2.58
TNFRSF4-201ENST00000379236 SSH1Q8WYL5 1049 aa31.16■■■□□ 2.58
TNFRSF4-201ENST00000379236 FBXW7Q969H0 707 aa31.16■■■□□ 2.58
TNFRSF4-201ENST00000379236 GLIS2Q9BZE0 524 aaPredicted RBP31.16■■■□□ 2.58
TNFRSF4-201ENST00000379236 ZNF804BA4D1E1 1349 aa31.16■■■□□ 2.58
TNFRSF4-201ENST00000379236 USP17L3A6NCW0 530 aa31.15■■■□□ 2.58
TNFRSF4-201ENST00000379236 USP17L4A6NCW7 530 aa31.15■■■□□ 2.58
TNFRSF4-201ENST00000379236 FMR1Q06787 632 aaKnown RBP eCLIP31.15■■■□□ 2.58
TNFRSF4-201ENST00000379236 CHRNDQ07001 517 aa31.15■■■□□ 2.58
TNFRSF4-201ENST00000379236 CDC37L1Q7L3B6 337 aa31.15■■■□□ 2.58
TNFRSF4-201ENST00000379236 USP17L1Q7RTZ2 530 aa31.15■■■□□ 2.58
TNFRSF4-201ENST00000379236 PGAP2Q9UHJ9 254 aa31.15■■■□□ 2.58
TNFRSF4-201ENST00000379236 HSPA1AP0DMV8 641 aaKnown RBP31.14■■■□□ 2.58
TNFRSF4-201ENST00000379236 HSPA1BP0DMV9 641 aaKnown RBP31.14■■■□□ 2.58
TNFRSF4-201ENST00000379236 PAXIP1Q6ZW49 1069 aaPredicted RBP31.14■■■□□ 2.58
TNFRSF4-201ENST00000379236 AGBL3Q8NEM8 1001 aa31.14■■■□□ 2.58
TNFRSF4-201ENST00000379236 KIF4BQ2VIQ3 1234 aa31.13■■■□□ 2.57
TNFRSF4-201ENST00000379236 ALDH1L2Q3SY69 923 aa31.13■■■□□ 2.57
TNFRSF4-201ENST00000379236 COA1Q9GZY4 146 aa31.13■■■□□ 2.57
TNFRSF4-201ENST00000379236 SMC4Q9NTJ3 1288 aa31.13■■■□□ 2.57
TNFRSF4-201ENST00000379236 WTIPA6NIX2 430 aaPredicted RBP31.12■■■□□ 2.57
TNFRSF4-201ENST00000379236 RASSF10A6NK89 507 aa31.12■■■□□ 2.57
TNFRSF4-201ENST00000379236 ZNF408Q9H9D4 720 aa31.12■■■□□ 2.57
TNFRSF4-201ENST00000379236 ZNF609O15014 1411 aa31.11■■■□□ 2.57
TNFRSF4-201ENST00000379236 CELF2O95319 508 aaKnown RBP31.11■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms