RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 NARFQ9UHQ1 456 aa23.37■■□□□ 1.33
SSU72-204ENST00000378726 RTCBQ9Y3I0 505 aaKnown RBP23.37■■□□□ 1.33
SSU72-204ENST00000378726 A0A0D9SFI3 127 aa23.37■■□□□ 1.33
SSU72-204ENST00000378726 IFIT1P09914 478 aaKnown RBP23.37■■□□□ 1.33
SSU72-204ENST00000378726 ADORA1P30542 326 aa23.36■■□□□ 1.33
SSU72-204ENST00000378726 USPL1Q5W0Q7 1092 aa23.36■■□□□ 1.33
SSU72-204ENST00000378726 BICDL1Q6ZP65 573 aa23.36■■□□□ 1.33
SSU72-204ENST00000378726 BCL2L12Q9HB09 334 aa23.36■■□□□ 1.33
SSU72-204ENST00000378726 SNRKQ9NRH2 765 aa23.36■■□□□ 1.33
SSU72-204ENST00000378726 PAG1Q9NWQ8 432 aa23.36■■□□□ 1.33
SSU72-204ENST00000378726 GOLIM4O00461 696 aa23.35■■□□□ 1.33
SSU72-204ENST00000378726 RGL2O15211 777 aa23.35■■□□□ 1.33
SSU72-204ENST00000378726 ATP2B3Q16720 1220 aa23.35■■□□□ 1.33
SSU72-204ENST00000378726 CCDC152Q4G0S7 254 aa23.35■■□□□ 1.33
SSU72-204ENST00000378726 KBTBD3Q8NAB2 608 aa23.35■■□□□ 1.33
SSU72-204ENST00000378726 GRPEL1Q9HAV7 217 aa23.35■■□□□ 1.33
SSU72-204ENST00000378726 SEC31BQ9NQW1 1179 aa23.35■■□□□ 1.33
SSU72-204ENST00000378726 MYH3P11055 1940 aa23.35■■□□□ 1.33
SSU72-204ENST00000378726 ZPR1O75312 459 aa23.35■■□□□ 1.33
SSU72-204ENST00000378726 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.35■■□□□ 1.33
SSU72-204ENST00000378726 SRP68Q9UHB9 627 aaKnown RBP23.35■■□□□ 1.33
SSU72-204ENST00000378726 PDE8BO95263 885 aa23.34■■□□□ 1.33
SSU72-204ENST00000378726 TTC39AQ5SRH9 613 aa23.34■■□□□ 1.33
SSU72-204ENST00000378726 TBC1D9BQ66K14 1250 aa23.34■■□□□ 1.33
SSU72-204ENST00000378726 SNX14Q9Y5W7 946 aa23.34■■□□□ 1.33
SSU72-204ENST00000378726 FAM196AQ6ZSG2 479 aa23.33■■□□□ 1.33
SSU72-204ENST00000378726 KRT27Q7Z3Y8 459 aa23.33■■□□□ 1.33
SSU72-204ENST00000378726 VGLL2Q8N8G2 317 aa23.33■■□□□ 1.33
SSU72-204ENST00000378726 CCDC171Q6TFL3 1326 aa23.33■■□□□ 1.33
SSU72-204ENST00000378726 ERFEQ4G0M1 354 aa23.33■■□□□ 1.33
SSU72-204ENST00000378726 RASEFQ8IZ41 740 aa23.33■■□□□ 1.33
SSU72-204ENST00000378726 ARHGEF1Q92888 912 aaKnown RBP23.33■■□□□ 1.33
SSU72-204ENST00000378726 GBP4Q96PP9 640 aa23.33■■□□□ 1.33
SSU72-204ENST00000378726 MPHOSPH8Q99549 860 aa23.33■■□□□ 1.33
SSU72-204ENST00000378726 RIC1Q4ADV7 1423 aa23.32■■□□□ 1.32
SSU72-204ENST00000378726 AMIGO3Q86WK7 504 aa23.32■■□□□ 1.32
SSU72-204ENST00000378726 MAP4K1Q92918 833 aa23.32■■□□□ 1.32
SSU72-204ENST00000378726 MROH5Q6ZUA9 1318 aa23.31■■□□□ 1.32
SSU72-204ENST00000378726 SBF2Q86WG5 1849 aa23.31■■□□□ 1.32
SSU72-204ENST00000378726 CHGBP05060 677 aa23.31■■□□□ 1.32
SSU72-204ENST00000378726 GTF2E1P29083 439 aaPredicted RBP23.31■■□□□ 1.32
SSU72-204ENST00000378726 FKBP4Q02790 459 aaKnown RBP eCLIP23.31■■□□□ 1.32
SSU72-204ENST00000378726 UPF3BQ9BZI7 483 aaKnown RBP23.31■■□□□ 1.32
SSU72-204ENST00000378726 RFX7Q2KHR2 1363 aa23.31■■□□□ 1.32
SSU72-204ENST00000378726 NECTIN1Q15223 517 aa23.31■■□□□ 1.32
SSU72-204ENST00000378726 PRPF40BQ6NWY9 871 aaKnown RBP23.31■■□□□ 1.32
SSU72-204ENST00000378726 ZNF589Q86UQ0 364 aaPredicted RBP23.31■■□□□ 1.32
SSU72-204ENST00000378726 HELBQ8NG08 1087 aaPredicted RBP23.31■■□□□ 1.32
SSU72-204ENST00000378726 SETDB2Q96T68 719 aa23.31■■□□□ 1.32
SSU72-204ENST00000378726 LRRC4BQ9NT99 713 aa23.31■■□□□ 1.32
SSU72-204ENST00000378726 KCNJ4P48050 445 aa23.3■■□□□ 1.32
SSU72-204ENST00000378726 MCM2P49736 904 aa23.3■■□□□ 1.32
SSU72-204ENST00000378726 TRAPPC3LQ5T215 181 aa23.29■■□□□ 1.32
SSU72-204ENST00000378726 GAS2L3Q86XJ1 694 aa23.29■■□□□ 1.32
SSU72-204ENST00000378726 RBM8AQ9Y5S9 174 aaKnown RBP23.29■■□□□ 1.32
SSU72-204ENST00000378726 MED23Q9ULK4 1368 aa23.29■■□□□ 1.32
SSU72-204ENST00000378726 BCORQ6W2J9 1755 aa23.29■■□□□ 1.32
SSU72-204ENST00000378726 IGHMBP2P38935 993 aaKnown RBP23.29■■□□□ 1.32
SSU72-204ENST00000378726 MCMDC2Q4G0Z9 681 aa23.29■■□□□ 1.32
SSU72-204ENST00000378726 TICAM2Q86XR7 235 aa23.29■■□□□ 1.32
SSU72-204ENST00000378726 RTL9Q8NET4 1388 aa23.28■■□□□ 1.32
SSU72-204ENST00000378726 TAF5LO75529 589 aa23.28■■□□□ 1.32
SSU72-204ENST00000378726 SEC62Q99442 399 aaKnown RBP23.28■■□□□ 1.32
SSU72-204ENST00000378726 PHF14O94880 888 aa23.28■■□□□ 1.32
SSU72-204ENST00000378726 TRIM37O94972 964 aa23.28■■□□□ 1.32
SSU72-204ENST00000378726 RFC4P35249 363 aa23.28■■□□□ 1.32
SSU72-204ENST00000378726 SLC10A5Q5PT55 438 aa23.28■■□□□ 1.32
SSU72-204ENST00000378726 KCNB2Q92953 911 aa23.28■■□□□ 1.32
SSU72-204ENST00000378726 ISY1Q9ULR0 285 aaKnown RBP23.28■■□□□ 1.32
SSU72-204ENST00000378726 SSFA2P28290 1259 aa23.27■■□□□ 1.32
SSU72-204ENST00000378726 SCARF1Q14162 830 aa23.27■■□□□ 1.32
SSU72-204ENST00000378726 LPIN2Q92539 896 aa23.27■■□□□ 1.32
SSU72-204ENST00000378726 NYXQ9GZU5 481 aa23.27■■□□□ 1.32
SSU72-204ENST00000378726 LY75O60449 1722 aa23.27■■□□□ 1.32
SSU72-204ENST00000378726 SF3B3Q15393 1217 aaKnown RBP23.27■■□□□ 1.31
SSU72-204ENST00000378726 PUM3Q15397 648 aaKnown RBP23.27■■□□□ 1.31
SSU72-204ENST00000378726 ZKSCAN1P17029 563 aaPredicted RBP23.26■■□□□ 1.31
SSU72-204ENST00000378726 CREB3L3Q68CJ9 461 aa23.26■■□□□ 1.31
SSU72-204ENST00000378726 FGFR2P21802 821 aa23.25■■□□□ 1.31
SSU72-204ENST00000378726 CLCN1P35523 988 aa23.25■■□□□ 1.31
SSU72-204ENST00000378726 ZNF772Q68DY9 489 aaPredicted RBP23.25■■□□□ 1.31
SSU72-204ENST00000378726 CCDC129Q6ZRS4 1044 aa23.25■■□□□ 1.31
SSU72-204ENST00000378726 C3orf67Q6ZVT6 689 aa23.25■■□□□ 1.31
SSU72-204ENST00000378726 NBPF5PQ86XG9 351 aaPredicted RBP23.25■■□□□ 1.31
SSU72-204ENST00000378726 DDX60Q8IY21 1712 aaKnown RBP23.25■■□□□ 1.31
SSU72-204ENST00000378726 RNF113AO15541 343 aaKnown RBP23.25■■□□□ 1.31
SSU72-204ENST00000378726 ZAP70P43403 619 aa23.25■■□□□ 1.31
SSU72-204ENST00000378726 RBM6P78332 1123 aaKnown RBP23.25■■□□□ 1.31
SSU72-204ENST00000378726 SKOR2Q2VWA4 1001 aaPredicted RBP23.25■■□□□ 1.31
SSU72-204ENST00000378726 SLFNL1Q499Z3 407 aa23.25■■□□□ 1.31
SSU72-204ENST00000378726 TPTE2Q6XPS3 522 aa23.25■■□□□ 1.31
SSU72-204ENST00000378726 TMX3Q96JJ7 454 aa23.25■■□□□ 1.31
SSU72-204ENST00000378726 ZNF512BQ96KM6 892 aaPredicted RBP23.25■■□□□ 1.31
SSU72-204ENST00000378726 CDC5LQ99459 802 aaKnown RBP23.25■■□□□ 1.31
SSU72-204ENST00000378726 HELLSQ9NRZ9 838 aa23.25■■□□□ 1.31
SSU72-204ENST00000378726 EP400Q96L91 3159 aa23.24■■□□□ 1.31
SSU72-204ENST00000378726 ABCC12Q96J65 1359 aa23.24■■□□□ 1.31
SSU72-204ENST00000378726 SLC27A2O14975 620 aa23.23■■□□□ 1.31
SSU72-204ENST00000378726 MCAMP43121 646 aa23.23■■□□□ 1.31
SSU72-204ENST00000378726 ADCK5Q3MIX3 580 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms