RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 MINPP1Q9UNW1 487 aa14.64□□□□□ -0.07
DEPDC4-202ENST00000378244 MYH3P11055 1940 aa14.63□□□□□ -0.07
DEPDC4-202ENST00000378244 TAF5LO75529 589 aa14.63□□□□□ -0.07
DEPDC4-202ENST00000378244 PRKCSHP14314 528 aaPredicted RBP14.63□□□□□ -0.07
DEPDC4-202ENST00000378244 CRBNQ96SW2 442 aa14.63□□□□□ -0.07
DEPDC4-202ENST00000378244 C6orf229H3BNL8 230 aa14.63□□□□□ -0.07
DEPDC4-202ENST00000378244 SNAP23O00161 211 aa14.63□□□□□ -0.07
DEPDC4-202ENST00000378244 LRRC24Q50LG9 513 aa14.63□□□□□ -0.07
DEPDC4-202ENST00000378244 ZBTB40Q9NUA8 1239 aa14.63□□□□□ -0.07
DEPDC4-202ENST00000378244 CC2D2BQ6DHV5 1058 aa14.62□□□□□ -0.07
DEPDC4-202ENST00000378244 TMC4Q7Z404 712 aa14.62□□□□□ -0.07
DEPDC4-202ENST00000378244 RNF181Q9P0P0 153 aa14.62□□□□□ -0.07
DEPDC4-202ENST00000378244 FKBP4Q02790 459 aaKnown RBP eCLIP14.61□□□□□ -0.07
DEPDC4-202ENST00000378244 PTPN12Q05209 780 aaKnown RBP14.61□□□□□ -0.07
DEPDC4-202ENST00000378244 CHRNDQ07001 517 aa14.61□□□□□ -0.07
DEPDC4-202ENST00000378244 C9orf131Q5VYM1 1079 aa14.61□□□□□ -0.07
DEPDC4-202ENST00000378244 RIMBP2O15034 1052 aa14.61□□□□□ -0.07
DEPDC4-202ENST00000378244 RFX5P48382 616 aaPredicted RBP14.61□□□□□ -0.07
DEPDC4-202ENST00000378244 POLLQ9UGP5 575 aa14.61□□□□□ -0.07
DEPDC4-202ENST00000378244 ARFGEF1Q9Y6D6 1849 aa14.6□□□□□ -0.07
DEPDC4-202ENST00000378244 UFL1O94874 794 aa14.6□□□□□ -0.07
DEPDC4-202ENST00000378244 LMNB1P20700 586 aa14.6□□□□□ -0.07
DEPDC4-202ENST00000378244 AOC3Q16853 763 aa14.6□□□□□ -0.07
DEPDC4-202ENST00000378244 BCL11AQ9H165 835 aa14.6□□□□□ -0.07
DEPDC4-202ENST00000378244 MTX1Q13505 466 aa14.59□□□□□ -0.07
DEPDC4-202ENST00000378244 CEP85Q6P2H3 762 aa14.59□□□□□ -0.07
DEPDC4-202ENST00000378244 TBC1D16Q8TBP0 767 aa14.59□□□□□ -0.07
DEPDC4-202ENST00000378244 XDHP47989 1333 aa14.59□□□□□ -0.07
DEPDC4-202ENST00000378244 PPIP5K2O43314 1243 aa14.59□□□□□ -0.07
DEPDC4-202ENST00000378244 ATP8B2P98198 1209 aa14.59□□□□□ -0.07
DEPDC4-202ENST00000378244 WASHC4Q2M389 1173 aa14.59□□□□□ -0.07
DEPDC4-202ENST00000378244 LARGE2Q8N3Y3 721 aa14.59□□□□□ -0.07
DEPDC4-202ENST00000378244 PSMD1Q99460 953 aa14.59□□□□□ -0.07
DEPDC4-202ENST00000378244 CHMP4BQ9H444 224 aaKnown RBP14.59□□□□□ -0.07
DEPDC4-202ENST00000378244 GGA1Q9UJY5 639 aa14.59□□□□□ -0.07
DEPDC4-202ENST00000378244 SNED1Q8TER0 1413 aa14.58□□□□□ -0.08
DEPDC4-202ENST00000378244 KCNJ4P48050 445 aa14.58□□□□□ -0.08
DEPDC4-202ENST00000378244 METTL24Q5JXM2 366 aa14.58□□□□□ -0.08
DEPDC4-202ENST00000378244 EXOC6Q8TAG9 804 aa14.58□□□□□ -0.08
DEPDC4-202ENST00000378244 RIPOR2Q9Y4F9 1068 aa14.58□□□□□ -0.08
DEPDC4-202ENST00000378244 SPEF2Q9C093 1822 aa14.58□□□□□ -0.08
DEPDC4-202ENST00000378244 EYA2O00167 538 aa14.58□□□□□ -0.08
DEPDC4-202ENST00000378244 IARSP41252 1262 aaKnown RBP14.58□□□□□ -0.08
DEPDC4-202ENST00000378244 CENPBP07199 599 aaPredicted RBP14.57□□□□□ -0.08
DEPDC4-202ENST00000378244 KLRK1P26718 216 aa14.57□□□□□ -0.08
DEPDC4-202ENST00000378244 GRIPAP1Q4V328 841 aa14.57□□□□□ -0.08
DEPDC4-202ENST00000378244 ANKRD2Q9GZV1 360 aa14.57□□□□□ -0.08
DEPDC4-202ENST00000378244 SURF6O75683 361 aaKnown RBP14.57□□□□□ -0.08
DEPDC4-202ENST00000378244 DOK7Q18PE1 504 aa14.57□□□□□ -0.08
DEPDC4-202ENST00000378244 ATG9AQ7Z3C6 839 aa14.57□□□□□ -0.08
DEPDC4-202ENST00000378244 SIRT2Q8IXJ6 389 aa14.57□□□□□ -0.08
DEPDC4-202ENST00000378244 ZNF526Q8TF50 670 aaPredicted RBP14.57□□□□□ -0.08
DEPDC4-202ENST00000378244 JDP2Q8WYK2 163 aa14.57□□□□□ -0.08
DEPDC4-202ENST00000378244 ZC3H12CQ9C0D7 883 aaKnown RBP14.57□□□□□ -0.08
DEPDC4-202ENST00000378244 COPRSQ9NQ92 184 aa14.57□□□□□ -0.08
DEPDC4-202ENST00000378244 PODXL2Q9NZ53 605 aa14.57□□□□□ -0.08
DEPDC4-202ENST00000378244 LTBP3Q9NS15 1303 aa14.56□□□□□ -0.08
DEPDC4-202ENST00000378244 TXNRD3Q86VQ6 643 aa14.56□□□□□ -0.08
DEPDC4-202ENST00000378244 SUPT20HQ8NEM7 779 aa14.56□□□□□ -0.08
DEPDC4-202ENST00000378244 SSH3Q8TE77 659 aa14.56□□□□□ -0.08
DEPDC4-202ENST00000378244 RTFDC1Q9BY42 306 aaPredicted RBP14.56□□□□□ -0.08
DEPDC4-202ENST00000378244 DBNDD1Q9H9R9 158 aa14.56□□□□□ -0.08
DEPDC4-202ENST00000378244 ZNF804BA4D1E1 1349 aa14.56□□□□□ -0.08
DEPDC4-202ENST00000378244 FER1L6Q2WGJ9 1857 aa14.55□□□□□ -0.08
DEPDC4-202ENST00000378244 APBB1O00213 710 aa14.55□□□□□ -0.08
DEPDC4-202ENST00000378244 OS9Q13438 667 aaPredicted RBP14.55□□□□□ -0.08
DEPDC4-202ENST00000378244 G3V3G9 751 aa14.55□□□□□ -0.08
DEPDC4-202ENST00000378244 ATP2B4P23634 1241 aa14.55□□□□□ -0.08
DEPDC4-202ENST00000378244 YY1P25490 414 aa14.55□□□□□ -0.08
DEPDC4-202ENST00000378244 POLA2Q14181 598 aa14.55□□□□□ -0.08
DEPDC4-202ENST00000378244 DCAF8Q5TAQ9 597 aa14.55□□□□□ -0.08
DEPDC4-202ENST00000378244 RPAP2Q8IXW5 612 aaPredicted RBP14.55□□□□□ -0.08
DEPDC4-202ENST00000378244 EXOC6BQ9Y2D4 811 aa14.55□□□□□ -0.08
DEPDC4-202ENST00000378244 PCDHB15Q9Y5E8 787 aa14.55□□□□□ -0.08
DEPDC4-202ENST00000378244 MROH5Q6ZUA9 1318 aa14.55□□□□□ -0.08
DEPDC4-202ENST00000378244 KIAA2012Q0VF49 1180 aa14.54□□□□□ -0.08
DEPDC4-202ENST00000378244 G3BP1Q13283 466 aaKnown RBP eCLIP14.54□□□□□ -0.08
DEPDC4-202ENST00000378244 DUOX1Q9NRD9 1551 aa14.54□□□□□ -0.08
DEPDC4-202ENST00000378244 PDE8BO95263 885 aa14.54□□□□□ -0.08
DEPDC4-202ENST00000378244 EYA3Q99504 573 aa14.54□□□□□ -0.08
DEPDC4-202ENST00000378244 CEP126Q9P2H0 1117 aa14.54□□□□□ -0.08
DEPDC4-202ENST00000378244 LEMD3Q9Y2U8 911 aa14.54□□□□□ -0.08
DEPDC4-202ENST00000378244 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.54□□□□□ -0.08
DEPDC4-202ENST00000378244 LRRC37AA6NMS7 1700 aa14.54□□□□□ -0.08
DEPDC4-202ENST00000378244 IL15P40933 162 aaPredicted RBP14.53□□□□□ -0.08
DEPDC4-202ENST00000378244 TFCP2Q12800 502 aa14.53□□□□□ -0.08
DEPDC4-202ENST00000378244 NIM1KQ8IY84 436 aa14.53□□□□□ -0.08
DEPDC4-202ENST00000378244 VGLL2Q8N8G2 317 aa14.53□□□□□ -0.08
DEPDC4-202ENST00000378244 KCNQ5Q9NR82 932 aa14.53□□□□□ -0.08
DEPDC4-202ENST00000378244 COL4A5P29400 1685 aa14.52□□□□□ -0.08
DEPDC4-202ENST00000378244 HMMRO75330 724 aa14.52□□□□□ -0.08
DEPDC4-202ENST00000378244 CIAO1O76071 339 aa14.52□□□□□ -0.08
DEPDC4-202ENST00000378244 RAD17O75943 681 aa14.52□□□□□ -0.09
DEPDC4-202ENST00000378244 GYG1P46976 350 aa14.52□□□□□ -0.09
DEPDC4-202ENST00000378244 SASH1O94885 1247 aa14.51□□□□□ -0.09
DEPDC4-202ENST00000378244 TIMM10P62072 90 aa14.51□□□□□ -0.09
DEPDC4-202ENST00000378244 GJA3Q9Y6H8 435 aa14.51□□□□□ -0.09
DEPDC4-202ENST00000378244 CCDC88AQ3V6T2 1871 aa14.51□□□□□ -0.09
DEPDC4-202ENST00000378244 ECE2O60344 883 aa14.5□□□□□ -0.09
DEPDC4-202ENST00000378244 DDNO94850 711 aaPredicted RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms