RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 RPS6KB1P23443 525 aa24.14■■□□□ 1.45
VSX1-202ENST00000376709 GJB2P29033 226 aa24.14■■□□□ 1.45
VSX1-202ENST00000376709 ZNF445P59923 1031 aa24.14■■□□□ 1.45
VSX1-202ENST00000376709 IFIT5Q13325 482 aaKnown RBP24.14■■□□□ 1.45
VSX1-202ENST00000376709 KRT32Q14532 448 aa24.14■■□□□ 1.45
VSX1-202ENST00000376709 HSP90AB3PQ58FF7 597 aa24.14■■□□□ 1.45
VSX1-202ENST00000376709 FBXO3Q9UK99 471 aa24.14■■□□□ 1.45
VSX1-202ENST00000376709 TPCN1Q9ULQ1 816 aa24.14■■□□□ 1.45
VSX1-202ENST00000376709 U3KPZ7 1027 aaPredicted RBP24.14■■□□□ 1.45
VSX1-202ENST00000376709 SH3TC1Q8TE82 1336 aa24.14■■□□□ 1.45
VSX1-202ENST00000376709 BARGINQ6ZT62 677 aa24.13■■□□□ 1.45
VSX1-202ENST00000376709 TCEANC2Q96MN5 208 aa24.13■■□□□ 1.45
VSX1-202ENST00000376709 RBM27Q9P2N5 1060 aaKnown RBP24.13■■□□□ 1.45
VSX1-202ENST00000376709 AKAP2Q9Y2D5 859 aa24.13■■□□□ 1.45
VSX1-202ENST00000376709 COL9A3Q14050 684 aaPredicted RBP24.12■■□□□ 1.45
VSX1-202ENST00000376709 GORABQ5T7V8 394 aa24.12■■□□□ 1.45
VSX1-202ENST00000376709 NLRP10Q86W26 655 aa24.12■■□□□ 1.45
VSX1-202ENST00000376709 NECAB1Q8N987 351 aa24.12■■□□□ 1.45
VSX1-202ENST00000376709 TCHHQ07283 1943 aa24.11■■□□□ 1.45
VSX1-202ENST00000376709 ANKRD36CQ5JPF3 1778 aa24.11■■□□□ 1.45
VSX1-202ENST00000376709 CSF1RP07333 972 aa24.11■■□□□ 1.45
VSX1-202ENST00000376709 C8orf37Q96NL8 207 aa24.11■■□□□ 1.45
VSX1-202ENST00000376709 CDHR2Q9BYE9 1310 aa24.11■■□□□ 1.45
VSX1-202ENST00000376709 CCDC158Q5M9N0 1113 aa24.1■■□□□ 1.45
VSX1-202ENST00000376709 SYNE4Q8N205 404 aa24.1■■□□□ 1.45
VSX1-202ENST00000376709 GDPD2Q9HCC8 539 aa24.1■■□□□ 1.45
VSX1-202ENST00000376709 HELLSQ9NRZ9 838 aa24.1■■□□□ 1.45
VSX1-202ENST00000376709 NSFL1CQ9UNZ2 370 aaKnown RBP24.1■■□□□ 1.45
VSX1-202ENST00000376709 TICAM2Q86XR7 235 aa24.1■■□□□ 1.45
VSX1-202ENST00000376709 ALDH8A1Q9H2A2 487 aaPredicted RBP24.1■■□□□ 1.45
VSX1-202ENST00000376709 TBC1D2BQ9UPU7 963 aa24.1■■□□□ 1.45
VSX1-202ENST00000376709 SPEF2Q9C093 1822 aa24.1■■□□□ 1.45
VSX1-202ENST00000376709 IL6STP40189 918 aaPredicted RBP24.09■■□□□ 1.45
VSX1-202ENST00000376709 ST3GAL1Q11201 340 aa24.09■■□□□ 1.45
VSX1-202ENST00000376709 FAM98CQ17RN3 349 aaKnown RBP24.09■■□□□ 1.45
VSX1-202ENST00000376709 DZIP3Q86Y13 1208 aaKnown RBP24.09■■□□□ 1.45
VSX1-202ENST00000376709 TMEM63CQ9P1W3 806 aa24.09■■□□□ 1.45
VSX1-202ENST00000376709 ATP6V1DQ9Y5K8 247 aa24.09■■□□□ 1.45
VSX1-202ENST00000376709 F13A1P00488 732 aa24.09■■□□□ 1.45
VSX1-202ENST00000376709 TTC39AQ5SRH9 613 aa24.09■■□□□ 1.45
VSX1-202ENST00000376709 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.09■■□□□ 1.45
VSX1-202ENST00000376709 NEK1Q96PY6 1258 aa24.09■■□□□ 1.45
VSX1-202ENST00000376709 FKBP4Q02790 459 aaKnown RBP eCLIP24.08■■□□□ 1.45
VSX1-202ENST00000376709 XAGE2Q96GT9 111 aa24.08■■□□□ 1.45
VSX1-202ENST00000376709 NUP98P52948 1817 aa24.08■■□□□ 1.45
VSX1-202ENST00000376709 DTNBO60941 627 aa24.08■■□□□ 1.44
VSX1-202ENST00000376709 CYP21A2P08686 494 aa24.08■■□□□ 1.44
VSX1-202ENST00000376709 ATP6V1AP38606 617 aa24.08■■□□□ 1.44
VSX1-202ENST00000376709 NASPP49321 788 aaPredicted RBP24.08■■□□□ 1.44
VSX1-202ENST00000376709 TOB2Q14106 344 aaPredicted RBP24.08■■□□□ 1.44
VSX1-202ENST00000376709 SLFNL1Q499Z3 407 aa24.08■■□□□ 1.44
VSX1-202ENST00000376709 USP48Q86UV5 1035 aa24.08■■□□□ 1.44
VSX1-202ENST00000376709 NGLY1Q96IV0 654 aa24.08■■□□□ 1.44
VSX1-202ENST00000376709 TRMT112Q9UI30 125 aaKnown RBP24.08■■□□□ 1.44
VSX1-202ENST00000376709 MYH3P11055 1940 aa24.07■■□□□ 1.44
VSX1-202ENST00000376709 ZMYM1Q5SVZ6 1142 aa24.07■■□□□ 1.44
VSX1-202ENST00000376709 LOC102724428A0A0B4J2F2 783 aa24.06■■□□□ 1.44
VSX1-202ENST00000376709 ITGA6P23229 1130 aa24.06■■□□□ 1.44
VSX1-202ENST00000376709 ADORA1P30542 326 aa24.06■■□□□ 1.44
VSX1-202ENST00000376709 SIK1P57059 783 aa24.06■■□□□ 1.44
VSX1-202ENST00000376709 INTS5Q6P9B9 1019 aaKnown RBP24.06■■□□□ 1.44
VSX1-202ENST00000376709 TTLL11Q8NHH1 800 aa24.06■■□□□ 1.44
VSX1-202ENST00000376709 IRS4O14654 1257 aaPredicted RBP24.06■■□□□ 1.44
VSX1-202ENST00000376709 RNF113AO15541 343 aaKnown RBP24.06■■□□□ 1.44
VSX1-202ENST00000376709 KCNQ2O43526 872 aa24.06■■□□□ 1.44
VSX1-202ENST00000376709 CTSWP56202 376 aa24.06■■□□□ 1.44
VSX1-202ENST00000376709 GREM2Q9H772 168 aa24.06■■□□□ 1.44
VSX1-202ENST00000376709 RRAGDQ9NQL2 400 aaPredicted RBP24.06■■□□□ 1.44
VSX1-202ENST00000376709 CCDC87Q9NVE4 849 aa24.06■■□□□ 1.44
VSX1-202ENST00000376709 BCL9LQ86UU0 1499 aa24.05■■□□□ 1.44
VSX1-202ENST00000376709 ERVV-1B6SEH8 477 aa24.05■■□□□ 1.44
VSX1-202ENST00000376709 CRKLP46109 303 aaKnown RBP24.05■■□□□ 1.44
VSX1-202ENST00000376709 LDHAL6AQ6ZMR3 332 aa24.05■■□□□ 1.44
VSX1-202ENST00000376709 DSCC1Q9BVC3 393 aa24.05■■□□□ 1.44
VSX1-202ENST00000376709 CNPY2Q9Y2B0 182 aa24.05■■□□□ 1.44
VSX1-202ENST00000376709 ANKRD18BA2A2Z9 1011 aa24.05■■□□□ 1.44
VSX1-202ENST00000376709 VPS37CA5D8V6 355 aaPredicted RBP24.05■■□□□ 1.44
VSX1-202ENST00000376709 ITPK1Q13572 414 aa24.05■■□□□ 1.44
VSX1-202ENST00000376709 LRRFIP1Q32MZ4 808 aaKnown RBP24.05■■□□□ 1.44
VSX1-202ENST00000376709 METTL24Q5JXM2 366 aa24.05■■□□□ 1.44
VSX1-202ENST00000376709 MTMR6Q9Y217 621 aa24.05■■□□□ 1.44
VSX1-202ENST00000376709 SYCE3A1L190 88 aa24.04■■□□□ 1.44
VSX1-202ENST00000376709 EIF5P55010 431 aaKnown RBP24.04■■□□□ 1.44
VSX1-202ENST00000376709 ANP32BQ92688 251 aaKnown RBP24.04■■□□□ 1.44
VSX1-202ENST00000376709 SYAP1Q96A49 352 aaPredicted RBP24.04■■□□□ 1.44
VSX1-202ENST00000376709 GADD45BO75293 160 aaPredicted RBP24.03■■□□□ 1.44
VSX1-202ENST00000376709 STK3Q13188 491 aa24.03■■□□□ 1.44
VSX1-202ENST00000376709 TMEM87AQ8NBN3 555 aa24.03■■□□□ 1.44
VSX1-202ENST00000376709 MAST3O60307 1309 aa24.03■■□□□ 1.44
VSX1-202ENST00000376709 UBN2Q6ZU65 1347 aa24.03■■□□□ 1.44
VSX1-202ENST00000376709 VPS72Q15906 364 aa24.03■■□□□ 1.44
VSX1-202ENST00000376709 ATP2B3Q16720 1220 aa24.03■■□□□ 1.44
VSX1-202ENST00000376709 LARP1BQ659C4 914 aaKnown RBP24.03■■□□□ 1.44
VSX1-202ENST00000376709 CNNM1Q9NRU3 951 aa24.03■■□□□ 1.44
VSX1-202ENST00000376709 RIC1Q4ADV7 1423 aa24.03■■□□□ 1.44
VSX1-202ENST00000376709 RIPOR2Q9Y4F9 1068 aa24.02■■□□□ 1.44
VSX1-202ENST00000376709 HSPD1P10809 573 aaKnown RBP24.02■■□□□ 1.44
VSX1-202ENST00000376709 PDIA4P13667 645 aaKnown RBP24.02■■□□□ 1.44
VSX1-202ENST00000376709 PDCP20941 246 aa24.02■■□□□ 1.44
VSX1-202ENST00000376709 FGD1P98174 961 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms