RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 RPS6KB1P23443 525 aa24.14■■□□□ 1.45
VSX1-202ENST00000376709 GJB2P29033 226 aa24.14■■□□□ 1.45
VSX1-202ENST00000376709 ZNF445P59923 1031 aa24.14■■□□□ 1.45
VSX1-202ENST00000376709 IFIT5Q13325 482 aaKnown RBP24.14■■□□□ 1.45
VSX1-202ENST00000376709 KRT32Q14532 448 aa24.14■■□□□ 1.45
VSX1-202ENST00000376709 HSP90AB3PQ58FF7 597 aa24.14■■□□□ 1.45
VSX1-202ENST00000376709 FBXO3Q9UK99 471 aa24.14■■□□□ 1.45
VSX1-202ENST00000376709 TPCN1Q9ULQ1 816 aa24.14■■□□□ 1.45
VSX1-202ENST00000376709 U3KPZ7 1027 aaPredicted RBP24.14■■□□□ 1.45
VSX1-202ENST00000376709 SH3TC1Q8TE82 1336 aa24.14■■□□□ 1.45
VSX1-202ENST00000376709 BARGINQ6ZT62 677 aa24.13■■□□□ 1.45
VSX1-202ENST00000376709 TCEANC2Q96MN5 208 aa24.13■■□□□ 1.45
VSX1-202ENST00000376709 RBM27Q9P2N5 1060 aaKnown RBP24.13■■□□□ 1.45
VSX1-202ENST00000376709 AKAP2Q9Y2D5 859 aa24.13■■□□□ 1.45
VSX1-202ENST00000376709 COL9A3Q14050 684 aaPredicted RBP24.12■■□□□ 1.45
VSX1-202ENST00000376709 GORABQ5T7V8 394 aa24.12■■□□□ 1.45
VSX1-202ENST00000376709 NLRP10Q86W26 655 aa24.12■■□□□ 1.45
VSX1-202ENST00000376709 NECAB1Q8N987 351 aa24.12■■□□□ 1.45
VSX1-202ENST00000376709 TCHHQ07283 1943 aa24.11■■□□□ 1.45
VSX1-202ENST00000376709 ANKRD36CQ5JPF3 1778 aa24.11■■□□□ 1.45
VSX1-202ENST00000376709 CSF1RP07333 972 aa24.11■■□□□ 1.45
VSX1-202ENST00000376709 C8orf37Q96NL8 207 aa24.11■■□□□ 1.45
VSX1-202ENST00000376709 CDHR2Q9BYE9 1310 aa24.11■■□□□ 1.45
VSX1-202ENST00000376709 CCDC158Q5M9N0 1113 aa24.1■■□□□ 1.45
VSX1-202ENST00000376709 SYNE4Q8N205 404 aa24.1■■□□□ 1.45
VSX1-202ENST00000376709 GDPD2Q9HCC8 539 aa24.1■■□□□ 1.45
VSX1-202ENST00000376709 HELLSQ9NRZ9 838 aa24.1■■□□□ 1.45
VSX1-202ENST00000376709 NSFL1CQ9UNZ2 370 aaKnown RBP24.1■■□□□ 1.45
VSX1-202ENST00000376709 TICAM2Q86XR7 235 aa24.1■■□□□ 1.45
VSX1-202ENST00000376709 ALDH8A1Q9H2A2 487 aaPredicted RBP24.1■■□□□ 1.45
VSX1-202ENST00000376709 TBC1D2BQ9UPU7 963 aa24.1■■□□□ 1.45
VSX1-202ENST00000376709 SPEF2Q9C093 1822 aa24.1■■□□□ 1.45
VSX1-202ENST00000376709 IL6STP40189 918 aaPredicted RBP24.09■■□□□ 1.45
VSX1-202ENST00000376709 ST3GAL1Q11201 340 aa24.09■■□□□ 1.45
VSX1-202ENST00000376709 FAM98CQ17RN3 349 aaKnown RBP24.09■■□□□ 1.45
VSX1-202ENST00000376709 DZIP3Q86Y13 1208 aaKnown RBP24.09■■□□□ 1.45
VSX1-202ENST00000376709 TMEM63CQ9P1W3 806 aa24.09■■□□□ 1.45
VSX1-202ENST00000376709 ATP6V1DQ9Y5K8 247 aa24.09■■□□□ 1.45
VSX1-202ENST00000376709 F13A1P00488 732 aa24.09■■□□□ 1.45
VSX1-202ENST00000376709 TTC39AQ5SRH9 613 aa24.09■■□□□ 1.45
VSX1-202ENST00000376709 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.09■■□□□ 1.45
VSX1-202ENST00000376709 NEK1Q96PY6 1258 aa24.09■■□□□ 1.45
VSX1-202ENST00000376709 FKBP4Q02790 459 aaKnown RBP eCLIP24.08■■□□□ 1.45
VSX1-202ENST00000376709 XAGE2Q96GT9 111 aa24.08■■□□□ 1.45
VSX1-202ENST00000376709 NUP98P52948 1817 aa24.08■■□□□ 1.45
VSX1-202ENST00000376709 DTNBO60941 627 aa24.08■■□□□ 1.44
VSX1-202ENST00000376709 CYP21A2P08686 494 aa24.08■■□□□ 1.44
VSX1-202ENST00000376709 ATP6V1AP38606 617 aa24.08■■□□□ 1.44
VSX1-202ENST00000376709 NASPP49321 788 aaPredicted RBP24.08■■□□□ 1.44
VSX1-202ENST00000376709 TOB2Q14106 344 aaPredicted RBP24.08■■□□□ 1.44
VSX1-202ENST00000376709 SLFNL1Q499Z3 407 aa24.08■■□□□ 1.44
VSX1-202ENST00000376709 USP48Q86UV5 1035 aa24.08■■□□□ 1.44
VSX1-202ENST00000376709 NGLY1Q96IV0 654 aa24.08■■□□□ 1.44
VSX1-202ENST00000376709 TRMT112Q9UI30 125 aaKnown RBP24.08■■□□□ 1.44
VSX1-202ENST00000376709 MYH3P11055 1940 aa24.07■■□□□ 1.44
VSX1-202ENST00000376709 ZMYM1Q5SVZ6 1142 aa24.07■■□□□ 1.44
VSX1-202ENST00000376709 LOC102724428A0A0B4J2F2 783 aa24.06■■□□□ 1.44
VSX1-202ENST00000376709 ITGA6P23229 1130 aa24.06■■□□□ 1.44
VSX1-202ENST00000376709 ADORA1P30542 326 aa24.06■■□□□ 1.44
VSX1-202ENST00000376709 SIK1P57059 783 aa24.06■■□□□ 1.44
VSX1-202ENST00000376709 INTS5Q6P9B9 1019 aaKnown RBP24.06■■□□□ 1.44
VSX1-202ENST00000376709 TTLL11Q8NHH1 800 aa24.06■■□□□ 1.44
VSX1-202ENST00000376709 IRS4O14654 1257 aaPredicted RBP24.06■■□□□ 1.44
VSX1-202ENST00000376709 RNF113AO15541 343 aaKnown RBP24.06■■□□□ 1.44
VSX1-202ENST00000376709 KCNQ2O43526 872 aa24.06■■□□□ 1.44
VSX1-202ENST00000376709 CTSWP56202 376 aa24.06■■□□□ 1.44
VSX1-202ENST00000376709 GREM2Q9H772 168 aa24.06■■□□□ 1.44
VSX1-202ENST00000376709 RRAGDQ9NQL2 400 aaPredicted RBP24.06■■□□□ 1.44
VSX1-202ENST00000376709 CCDC87Q9NVE4 849 aa24.06■■□□□ 1.44
VSX1-202ENST00000376709 BCL9LQ86UU0 1499 aa24.05■■□□□ 1.44
VSX1-202ENST00000376709 ERVV-1B6SEH8 477 aa24.05■■□□□ 1.44
VSX1-202ENST00000376709 CRKLP46109 303 aaKnown RBP24.05■■□□□ 1.44
VSX1-202ENST00000376709 LDHAL6AQ6ZMR3 332 aa24.05■■□□□ 1.44
VSX1-202ENST00000376709 DSCC1Q9BVC3 393 aa24.05■■□□□ 1.44
VSX1-202ENST00000376709 CNPY2Q9Y2B0 182 aa24.05■■□□□ 1.44
VSX1-202ENST00000376709 ANKRD18BA2A2Z9 1011 aa24.05■■□□□ 1.44
VSX1-202ENST00000376709 VPS37CA5D8V6 355 aaPredicted RBP24.05■■□□□ 1.44
VSX1-202ENST00000376709 ITPK1Q13572 414 aa24.05■■□□□ 1.44
VSX1-202ENST00000376709 LRRFIP1Q32MZ4 808 aaKnown RBP24.05■■□□□ 1.44
VSX1-202ENST00000376709 METTL24Q5JXM2 366 aa24.05■■□□□ 1.44
VSX1-202ENST00000376709 MTMR6Q9Y217 621 aa24.05■■□□□ 1.44
VSX1-202ENST00000376709 SYCE3A1L190 88 aa24.04■■□□□ 1.44
VSX1-202ENST00000376709 EIF5P55010 431 aaKnown RBP24.04■■□□□ 1.44
VSX1-202ENST00000376709 ANP32BQ92688 251 aaKnown RBP24.04■■□□□ 1.44
VSX1-202ENST00000376709 SYAP1Q96A49 352 aaPredicted RBP24.04■■□□□ 1.44
VSX1-202ENST00000376709 GADD45BO75293 160 aaPredicted RBP24.03■■□□□ 1.44
VSX1-202ENST00000376709 STK3Q13188 491 aa24.03■■□□□ 1.44
VSX1-202ENST00000376709 TMEM87AQ8NBN3 555 aa24.03■■□□□ 1.44
VSX1-202ENST00000376709 MAST3O60307 1309 aa24.03■■□□□ 1.44
VSX1-202ENST00000376709 UBN2Q6ZU65 1347 aa24.03■■□□□ 1.44
VSX1-202ENST00000376709 VPS72Q15906 364 aa24.03■■□□□ 1.44
VSX1-202ENST00000376709 ATP2B3Q16720 1220 aa24.03■■□□□ 1.44
VSX1-202ENST00000376709 LARP1BQ659C4 914 aaKnown RBP24.03■■□□□ 1.44
VSX1-202ENST00000376709 CNNM1Q9NRU3 951 aa24.03■■□□□ 1.44
VSX1-202ENST00000376709 RIC1Q4ADV7 1423 aa24.03■■□□□ 1.44
VSX1-202ENST00000376709 RIPOR2Q9Y4F9 1068 aa24.02■■□□□ 1.44
VSX1-202ENST00000376709 HSPD1P10809 573 aaKnown RBP24.02■■□□□ 1.44
VSX1-202ENST00000376709 PDIA4P13667 645 aaKnown RBP24.02■■□□□ 1.44
VSX1-202ENST00000376709 PDCP20941 246 aa24.02■■□□□ 1.44
VSX1-202ENST00000376709 FGD1P98174 961 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms