RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 PSEN1P49768 467 aa23.99■■□□□ 1.43
TMEFF1-201ENST00000374879 PSD3Q9NYI0 1048 aa23.99■■□□□ 1.43
TMEFF1-201ENST00000374879 EID1Q9Y6B2 187 aa23.99■■□□□ 1.43
TMEFF1-201ENST00000374879 SBNO1A3KN83 1393 aa23.99■■□□□ 1.43
TMEFF1-201ENST00000374879 A0A1B0GUL7 405 aa23.98■■□□□ 1.43
TMEFF1-201ENST00000374879 TUBB4AP04350 444 aa23.98■■□□□ 1.43
TMEFF1-201ENST00000374879 TMC6Q7Z403 805 aa23.98■■□□□ 1.43
TMEFF1-201ENST00000374879 IQUBQ8NA54 791 aa23.98■■□□□ 1.43
TMEFF1-201ENST00000374879 TCEANC2Q96MN5 208 aa23.98■■□□□ 1.43
TMEFF1-201ENST00000374879 PHLPP2Q6ZVD8 1323 aa23.98■■□□□ 1.43
TMEFF1-201ENST00000374879 RAB11FIP3O75154 756 aa23.98■■□□□ 1.43
TMEFF1-201ENST00000374879 ERCC4Q92889 916 aaPredicted RBP23.98■■□□□ 1.43
TMEFF1-201ENST00000374879 CEBPZQ03701 1054 aaKnown RBP23.97■■□□□ 1.43
TMEFF1-201ENST00000374879 EYA1Q99502 592 aa23.97■■□□□ 1.43
TMEFF1-201ENST00000374879 BRMS1Q9HCU9 246 aa23.97■■□□□ 1.43
TMEFF1-201ENST00000374879 SOS1Q07889 1333 aaPredicted RBP23.97■■□□□ 1.43
TMEFF1-201ENST00000374879 ADGRL3Q9HAR2 1447 aa23.97■■□□□ 1.43
TMEFF1-201ENST00000374879 FMN2Q9NZ56 1722 aa23.97■■□□□ 1.43
TMEFF1-201ENST00000374879 TPM1P09493 284 aa23.97■■□□□ 1.43
TMEFF1-201ENST00000374879 SFPQP23246 707 aaKnown RBP eCLIP23.97■■□□□ 1.43
TMEFF1-201ENST00000374879 TRIM65Q6PJ69 517 aa23.97■■□□□ 1.43
TMEFF1-201ENST00000374879 NCAPGQ9BPX3 1015 aa23.97■■□□□ 1.43
TMEFF1-201ENST00000374879 KDRP35968 1356 aa23.97■■□□□ 1.43
TMEFF1-201ENST00000374879 SURF6O75683 361 aaKnown RBP23.97■■□□□ 1.43
TMEFF1-201ENST00000374879 TSGA10IPQ3SY00 556 aa23.97■■□□□ 1.43
TMEFF1-201ENST00000374879 CCDC150Q8NCX0 1101 aa23.97■■□□□ 1.43
TMEFF1-201ENST00000374879 KCNB2Q92953 911 aa23.97■■□□□ 1.43
TMEFF1-201ENST00000374879 DDX11Q96FC9 970 aa23.97■■□□□ 1.43
TMEFF1-201ENST00000374879 DRC1Q96MC2 740 aa23.97■■□□□ 1.43
TMEFF1-201ENST00000374879 MYCBPQ99417 103 aaPredicted RBP23.97■■□□□ 1.43
TMEFF1-201ENST00000374879 ANO10Q9NW15 660 aa23.97■■□□□ 1.43
TMEFF1-201ENST00000374879 H3BQF6 201 aa23.96■■□□□ 1.43
TMEFF1-201ENST00000374879 NECTIN1Q15223 517 aa23.96■■□□□ 1.43
TMEFF1-201ENST00000374879 TTC31Q49AM3 519 aaPredicted RBP23.96■■□□□ 1.43
TMEFF1-201ENST00000374879 SRRTQ9BXP5 876 aaKnown RBP23.96■■□□□ 1.43
TMEFF1-201ENST00000374879 FUT8Q9BYC5 575 aa23.96■■□□□ 1.43
TMEFF1-201ENST00000374879 CTAGE5O15320 804 aa23.96■■□□□ 1.43
TMEFF1-201ENST00000374879 RHPN1Q8TCX5 695 aa23.96■■□□□ 1.43
TMEFF1-201ENST00000374879 XPO4Q9C0E2 1151 aaKnown RBP23.96■■□□□ 1.43
TMEFF1-201ENST00000374879 STK3Q13188 491 aa23.95■■□□□ 1.42
TMEFF1-201ENST00000374879 LRRFIP1Q32MZ4 808 aaKnown RBP23.95■■□□□ 1.42
TMEFF1-201ENST00000374879 CCAR1Q8IX12 1150 aaKnown RBP23.95■■□□□ 1.42
TMEFF1-201ENST00000374879 GOLPH3LQ9H4A5 285 aa23.95■■□□□ 1.42
TMEFF1-201ENST00000374879 ARFGAP3Q9NP61 516 aa23.95■■□□□ 1.42
TMEFF1-201ENST00000374879 KCNJ6P48051 423 aa23.95■■□□□ 1.42
TMEFF1-201ENST00000374879 NOM1Q5C9Z4 860 aaKnown RBP23.95■■□□□ 1.42
TMEFF1-201ENST00000374879 CEP170BQ9Y4F5 1589 aaPredicted RBP23.95■■□□□ 1.42
TMEFF1-201ENST00000374879 PARP3Q9Y6F1 533 aa23.95■■□□□ 1.42
TMEFF1-201ENST00000374879 IGSF1Q8N6C5 1336 aa23.94■■□□□ 1.42
TMEFF1-201ENST00000374879 SMC2O95347 1197 aa23.94■■□□□ 1.42
TMEFF1-201ENST00000374879 ZKSCAN1P17029 563 aaPredicted RBP23.94■■□□□ 1.42
TMEFF1-201ENST00000374879 MAGEA9P43362 315 aa23.94■■□□□ 1.42
TMEFF1-201ENST00000374879 FOXR1Q6PIV2 292 aa23.94■■□□□ 1.42
TMEFF1-201ENST00000374879 CEP57L1Q8IYX8 460 aa23.94■■□□□ 1.42
TMEFF1-201ENST00000374879 GIGYF1O75420 1035 aaPredicted RBP23.94■■□□□ 1.42
TMEFF1-201ENST00000374879 RESTQ13127 1097 aa23.94■■□□□ 1.42
TMEFF1-201ENST00000374879 IFNKQ9P0W0 207 aa23.94■■□□□ 1.42
TMEFF1-201ENST00000374879 HDAC5Q9UQL6 1122 aa23.94■■□□□ 1.42
TMEFF1-201ENST00000374879 PLPPR3Q6T4P5 718 aa23.93■■□□□ 1.42
TMEFF1-201ENST00000374879 STK31Q9BXU1 1019 aa23.93■■□□□ 1.42
TMEFF1-201ENST00000374879 CREB3L3Q68CJ9 461 aa23.93■■□□□ 1.42
TMEFF1-201ENST00000374879 GNL2Q13823 731 aaKnown RBP23.92■■□□□ 1.42
TMEFF1-201ENST00000374879 LEKR1Q6ZMV7 388 aa23.92■■□□□ 1.42
TMEFF1-201ENST00000374879 GPR161Q8N6U8 529 aaKnown RBP23.92■■□□□ 1.42
TMEFF1-201ENST00000374879 SSH3Q8TE77 659 aa23.92■■□□□ 1.42
TMEFF1-201ENST00000374879 RUFY2Q8WXA3 655 aa23.92■■□□□ 1.42
TMEFF1-201ENST00000374879 PARD6BQ9BYG5 372 aa23.92■■□□□ 1.42
TMEFF1-201ENST00000374879 SART3Q15020 963 aaKnown RBP23.91■■□□□ 1.42
TMEFF1-201ENST00000374879 GPATCH11Q8N954 259 aa23.91■■□□□ 1.42
TMEFF1-201ENST00000374879 RBM8AQ9Y5S9 174 aaKnown RBP23.91■■□□□ 1.42
TMEFF1-201ENST00000374879 TTC41PQ6P2S7 1318 aa23.91■■□□□ 1.42
TMEFF1-201ENST00000374879 JAK2O60674 1132 aa23.91■■□□□ 1.42
TMEFF1-201ENST00000374879 USP44Q9H0E7 712 aa23.91■■□□□ 1.42
TMEFF1-201ENST00000374879 RGPD8O14715 1765 aaPredicted RBP23.91■■□□□ 1.42
TMEFF1-201ENST00000374879 IVLP07476 585 aa23.9■■□□□ 1.42
TMEFF1-201ENST00000374879 NLRP6P59044 892 aa23.9■■□□□ 1.42
TMEFF1-201ENST00000374879 FLIIQ13045 1269 aa23.9■■□□□ 1.42
TMEFF1-201ENST00000374879 FTOQ9C0B1 505 aaKnown RBP eCLIP23.9■■□□□ 1.42
TMEFF1-201ENST00000374879 RNF216Q9NWF9 866 aaPredicted RBP23.9■■□□□ 1.42
TMEFF1-201ENST00000374879 TBX22Q9Y458 520 aa23.9■■□□□ 1.42
TMEFF1-201ENST00000374879 EIF3CLB5ME19 914 aaKnown RBP23.9■■□□□ 1.42
TMEFF1-201ENST00000374879 PPP1R42Q7Z4L9 355 aa23.9■■□□□ 1.42
TMEFF1-201ENST00000374879 EIF3CQ99613 913 aaKnown RBP23.9■■□□□ 1.42
TMEFF1-201ENST00000374879 CFAP45Q9UL16 551 aa23.9■■□□□ 1.42
TMEFF1-201ENST00000374879 NRDCO43847 1150 aa23.89■■□□□ 1.42
TMEFF1-201ENST00000374879 FAM177A1Q8N128 213 aaPredicted RBP23.89■■□□□ 1.42
TMEFF1-201ENST00000374879 NECTIN2Q92692 538 aa23.89■■□□□ 1.42
TMEFF1-201ENST00000374879 BRF1Q92994 677 aa23.89■■□□□ 1.42
TMEFF1-201ENST00000374879 DIP2AQ14689 1571 aa23.89■■□□□ 1.42
TMEFF1-201ENST00000374879 ATP2B1P20020 1258 aa23.89■■□□□ 1.41
TMEFF1-201ENST00000374879 NAT10Q9H0A0 1025 aaKnown RBP23.89■■□□□ 1.41
TMEFF1-201ENST00000374879 KINO60870 393 aaKnown RBP23.88■■□□□ 1.41
TMEFF1-201ENST00000374879 PRR29P0C7W0 189 aa23.88■■□□□ 1.41
TMEFF1-201ENST00000374879 UBTFL1P0CB47 393 aaPredicted RBP23.88■■□□□ 1.41
TMEFF1-201ENST00000374879 TOB2Q14106 344 aaPredicted RBP23.88■■□□□ 1.41
TMEFF1-201ENST00000374879 NUTM2GQ5VZR2 741 aa23.88■■□□□ 1.41
TMEFF1-201ENST00000374879 VPS18Q9P253 973 aa23.88■■□□□ 1.41
TMEFF1-201ENST00000374879 PIK3C2AO00443 1686 aa23.88■■□□□ 1.41
TMEFF1-201ENST00000374879 GNAT3A8MTJ3 354 aa23.87■■□□□ 1.41
TMEFF1-201ENST00000374879 LONRF2Q1L5Z9 754 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms