RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 MAGEB6P1A0A0J9YX57 407 aa12.68□□□□□ -0.38
PHACTR4-202ENST00000373839 TAF3Q5VWG9 929 aa12.68□□□□□ -0.38
PHACTR4-202ENST00000373839 TTC6Q86TZ1 520 aa12.68□□□□□ -0.38
PHACTR4-202ENST00000373839 FMNL3Q8IVF7 1028 aa12.68□□□□□ -0.38
PHACTR4-202ENST00000373839 ASXL1Q8IXJ9 1541 aa12.68□□□□□ -0.38
PHACTR4-202ENST00000373839 RAD50Q92878 1312 aa12.68□□□□□ -0.38
PHACTR4-202ENST00000373839 BRF1Q92994 677 aa12.68□□□□□ -0.38
PHACTR4-202ENST00000373839 HOOK2Q96ED9 719 aa12.68□□□□□ -0.38
PHACTR4-202ENST00000373839 SPAG5Q96R06 1193 aa12.68□□□□□ -0.38
PHACTR4-202ENST00000373839 SSX2IPQ9Y2D8 614 aa12.68□□□□□ -0.38
PHACTR4-202ENST00000373839 TBX22Q9Y458 520 aa12.68□□□□□ -0.38
PHACTR4-202ENST00000373839 FSD2A1L4K1 749 aa12.68□□□□□ -0.38
PHACTR4-202ENST00000373839 SPDYE3A6NKU9 549 aa12.68□□□□□ -0.38
PHACTR4-202ENST00000373839 TMCO5BA8MYB1 307 aa12.68□□□□□ -0.38
PHACTR4-202ENST00000373839 URI1O94763 535 aaPredicted RBP12.67□□□□□ -0.38
PHACTR4-202ENST00000373839 RBM17Q96I25 401 aaKnown RBP12.67□□□□□ -0.38
PHACTR4-202ENST00000373839 GNA11P29992 359 aa12.67□□□□□ -0.38
PHACTR4-202ENST00000373839 NPATQ14207 1427 aa12.67□□□□□ -0.38
PHACTR4-202ENST00000373839 SLC9C2Q5TAH2 1124 aa12.67□□□□□ -0.38
PHACTR4-202ENST00000373839 ALG1Q9BT22 464 aa12.67□□□□□ -0.38
PHACTR4-202ENST00000373839 MAP3K5Q99683 1374 aa12.67□□□□□ -0.38
PHACTR4-202ENST00000373839 DISP3Q9P2K9 1392 aa12.67□□□□□ -0.38
PHACTR4-202ENST00000373839 PSMA7O14818 248 aa12.67□□□□□ -0.38
PHACTR4-202ENST00000373839 SYKP43405 635 aa12.67□□□□□ -0.38
PHACTR4-202ENST00000373839 NAPAP54920 295 aa12.67□□□□□ -0.38
PHACTR4-202ENST00000373839 FAM83GA6ND36 823 aa12.67□□□□□ -0.38
PHACTR4-202ENST00000373839 STAT6P42226 847 aa12.67□□□□□ -0.38
PHACTR4-202ENST00000373839 GRIPAP1Q4V328 841 aa12.67□□□□□ -0.38
PHACTR4-202ENST00000373839 MSANTD4Q8NCY6 345 aa12.67□□□□□ -0.38
PHACTR4-202ENST00000373839 RRP36Q96EU6 259 aaKnown RBP12.67□□□□□ -0.38
PHACTR4-202ENST00000373839 ACSBG1Q96GR2 724 aa12.67□□□□□ -0.38
PHACTR4-202ENST00000373839 POLR3AO14802 1390 aaPredicted RBP12.67□□□□□ -0.38
PHACTR4-202ENST00000373839 MAST3O60307 1309 aa12.67□□□□□ -0.38
PHACTR4-202ENST00000373839 UQCRHLA0A096LP55 91 aa12.67□□□□□ -0.38
PHACTR4-202ENST00000373839 UQCRHP07919 91 aa12.67□□□□□ -0.38
PHACTR4-202ENST00000373839 CCDC113Q9H0I3 377 aa12.66□□□□□ -0.38
PHACTR4-202ENST00000373839 C11orf95C9JLR9 678 aaPredicted RBP12.66□□□□□ -0.38
PHACTR4-202ENST00000373839 PHACTR2O75167 634 aa12.66□□□□□ -0.38
PHACTR4-202ENST00000373839 CYLC1P35663 651 aaPredicted RBP12.66□□□□□ -0.38
PHACTR4-202ENST00000373839 SREK1Q8WXA9 508 aaKnown RBP12.66□□□□□ -0.38
PHACTR4-202ENST00000373839 STK32BQ9NY57 414 aa12.66□□□□□ -0.38
PHACTR4-202ENST00000373839 PUF60Q9UHX1 559 aaKnown RBP12.66□□□□□ -0.38
PHACTR4-202ENST00000373839 N4BP3O15049 544 aa12.66□□□□□ -0.38
PHACTR4-202ENST00000373839 AKR1B10O60218 316 aa12.66□□□□□ -0.38
PHACTR4-202ENST00000373839 ZNF608Q9ULD9 1512 aaPredicted RBP12.66□□□□□ -0.38
PHACTR4-202ENST00000373839 NUCB1Q02818 461 aa12.66□□□□□ -0.38
PHACTR4-202ENST00000373839 EIF4A2Q14240 407 aaKnown RBP12.66□□□□□ -0.38
PHACTR4-202ENST00000373839 KRT79Q5XKE5 535 aa12.66□□□□□ -0.38
PHACTR4-202ENST00000373839 SYNCQ9H7C4 482 aa12.66□□□□□ -0.38
PHACTR4-202ENST00000373839 ITSN2Q9NZM3 1697 aa12.66□□□□□ -0.38
PHACTR4-202ENST00000373839 IRS4O14654 1257 aaPredicted RBP12.66□□□□□ -0.38
PHACTR4-202ENST00000373839 NOP2P46087 812 aaKnown RBP12.66□□□□□ -0.38
PHACTR4-202ENST00000373839 PAG1Q9NWQ8 432 aa12.66□□□□□ -0.38
PHACTR4-202ENST00000373839 ZNF165P49910 485 aa12.65□□□□□ -0.38
PHACTR4-202ENST00000373839 SPECC1Q5M775 1068 aa12.65□□□□□ -0.38
PHACTR4-202ENST00000373839 MICALCLQ6ZW33 695 aa12.65□□□□□ -0.38
PHACTR4-202ENST00000373839 CCDC144CPQ8IYA2 1237 aa12.65□□□□□ -0.38
PHACTR4-202ENST00000373839 RAPGEF6Q8TEU7 1601 aa12.65□□□□□ -0.38
PHACTR4-202ENST00000373839 LDHBP07195 334 aaKnown RBP12.65□□□□□ -0.38
PHACTR4-202ENST00000373839 PDE1AP54750 535 aa12.65□□□□□ -0.38
PHACTR4-202ENST00000373839 HEATR3Q7Z4Q2 680 aa12.65□□□□□ -0.38
PHACTR4-202ENST00000373839 DENND2AQ9ULE3 1009 aa12.65□□□□□ -0.38
PHACTR4-202ENST00000373839 RNF113AO15541 343 aaKnown RBP12.65□□□□□ -0.38
PHACTR4-202ENST00000373839 TRIM75PA6NK02 468 aa12.65□□□□□ -0.38
PHACTR4-202ENST00000373839 TRAPPC3LQ5T215 181 aa12.64□□□□□ -0.39
PHACTR4-202ENST00000373839 GLT8D2Q9H1C3 349 aa12.64□□□□□ -0.39
PHACTR4-202ENST00000373839 GOPCQ9HD26 462 aa12.64□□□□□ -0.39
PHACTR4-202ENST00000373839 CKAP4Q07065 602 aaKnown RBP12.64□□□□□ -0.39
PHACTR4-202ENST00000373839 VTI1AQ96AJ9 217 aa12.64□□□□□ -0.39
PHACTR4-202ENST00000373839 VEZTQ9HBM0 779 aa12.64□□□□□ -0.39
PHACTR4-202ENST00000373839 HOMER2Q9NSB8 354 aa12.64□□□□□ -0.39
PHACTR4-202ENST00000373839 NSFL1CQ9UNZ2 370 aaKnown RBP12.64□□□□□ -0.39
PHACTR4-202ENST00000373839 RBM8AQ9Y5S9 174 aaKnown RBP12.64□□□□□ -0.39
PHACTR4-202ENST00000373839 GCP02774 474 aa12.64□□□□□ -0.39
PHACTR4-202ENST00000373839 HS2ST1Q7LGA3 356 aa12.64□□□□□ -0.39
PHACTR4-202ENST00000373839 MRPS27Q92552 414 aaKnown RBP12.64□□□□□ -0.39
PHACTR4-202ENST00000373839 IKBKGQ9Y6K9 419 aa12.64□□□□□ -0.39
PHACTR4-202ENST00000373839 EIF2AK4Q9P2K8 1649 aaKnown RBP12.64□□□□□ -0.39
PHACTR4-202ENST00000373839 TUBB4AP04350 444 aa12.64□□□□□ -0.39
PHACTR4-202ENST00000373839 ZSCAN22P10073 491 aaPredicted RBP12.64□□□□□ -0.39
PHACTR4-202ENST00000373839 FERP16591 822 aa12.64□□□□□ -0.39
PHACTR4-202ENST00000373839 PDE6BP35913 854 aa12.64□□□□□ -0.39
PHACTR4-202ENST00000373839 KIAA0753Q2KHM9 967 aa12.64□□□□□ -0.39
PHACTR4-202ENST00000373839 RRAGBQ5VZM2 374 aa12.64□□□□□ -0.39
PHACTR4-202ENST00000373839 CPLX3Q8WVH0 158 aa12.64□□□□□ -0.39
PHACTR4-202ENST00000373839 FAM107BQ9H098 131 aa12.64□□□□□ -0.39
PHACTR4-202ENST00000373839 RBM28Q9NW13 759 aaKnown RBP12.64□□□□□ -0.39
PHACTR4-202ENST00000373839 HOXB7P09629 217 aa12.64□□□□□ -0.39
PHACTR4-202ENST00000373839 MAP3K9P80192 1104 aa12.64□□□□□ -0.39
PHACTR4-202ENST00000373839 PICALMQ13492 652 aa12.64□□□□□ -0.39
PHACTR4-202ENST00000373839 TMC6Q7Z403 805 aa12.64□□□□□ -0.39
PHACTR4-202ENST00000373839 MPNDQ8N594 471 aa12.64□□□□□ -0.39
PHACTR4-202ENST00000373839 IP6K1Q92551 441 aa12.64□□□□□ -0.39
PHACTR4-202ENST00000373839 ANXA1P04083 346 aa12.63□□□□□ -0.39
PHACTR4-202ENST00000373839 PPP1R2P41236 205 aa12.63□□□□□ -0.39
PHACTR4-202ENST00000373839 HLTFQ14527 1009 aaKnown RBP eCLIP12.63□□□□□ -0.39
PHACTR4-202ENST00000373839 PPM1EQ8WY54 764 aa12.63□□□□□ -0.39
PHACTR4-202ENST00000373839 MEIS3Q99687 375 aa12.63□□□□□ -0.39
PHACTR4-202ENST00000373839 ATP10BO94823 1461 aa12.63□□□□□ -0.39
PHACTR4-202ENST00000373839 LMTK3Q96Q04 1460 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 248.7 ms