RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 ITGA6P23229 1130 aa28.75■■■□□ 2.19
COL9A2-201ENST00000372736 FOXO4P98177 505 aa28.75■■■□□ 2.19
COL9A2-201ENST00000372736 CHADLQ6NUI6 762 aa28.75■■■□□ 2.19
COL9A2-201ENST00000372736 LDHDQ86WU2 507 aa28.75■■■□□ 2.19
COL9A2-201ENST00000372736 EYA3Q99504 573 aa28.75■■■□□ 2.19
COL9A2-201ENST00000372736 BSDC1Q9NW68 430 aaPredicted RBP28.75■■■□□ 2.19
COL9A2-201ENST00000372736 XDHP47989 1333 aa28.74■■■□□ 2.19
COL9A2-201ENST00000372736 GGA1Q9UJY5 639 aa28.74■■■□□ 2.19
COL9A2-201ENST00000372736 RIMBP2O15034 1052 aa28.73■■■□□ 2.19
COL9A2-201ENST00000372736 RAD17O75943 681 aa28.73■■■□□ 2.19
COL9A2-201ENST00000372736 CIAPIN1Q6FI81 312 aa28.73■■■□□ 2.19
COL9A2-201ENST00000372736 DBNDD1Q9H9R9 158 aa28.73■■■□□ 2.19
COL9A2-201ENST00000372736 SMC4Q9NTJ3 1288 aa28.73■■■□□ 2.19
COL9A2-201ENST00000372736 SCN9AQ15858 1988 aa28.73■■■□□ 2.19
COL9A2-201ENST00000372736 LMOD1P29536 600 aaPredicted RBP28.72■■■□□ 2.19
COL9A2-201ENST00000372736 EAPPQ56P03 285 aaPredicted RBP28.72■■■□□ 2.19
COL9A2-201ENST00000372736 MINPP1Q9UNW1 487 aa28.72■■■□□ 2.19
COL9A2-201ENST00000372736 A0A1B0GUL6 1792 aa28.71■■■□□ 2.19
COL9A2-201ENST00000372736 EPS15P42566 896 aa28.71■■■□□ 2.19
COL9A2-201ENST00000372736 EPHA10Q5JZY3 1008 aa28.71■■■□□ 2.19
COL9A2-201ENST00000372736 PNMA8AQ86V59 439 aaPredicted RBP28.71■■■□□ 2.19
COL9A2-201ENST00000372736 C9orf78Q9NZ63 289 aaPredicted RBP28.71■■■□□ 2.19
COL9A2-201ENST00000372736 ECE2O60344 883 aa28.7■■■□□ 2.18
COL9A2-201ENST00000372736 IGHMBP2P38935 993 aaKnown RBP28.7■■■□□ 2.18
COL9A2-201ENST00000372736 UTYO14607 1347 aa28.69■■■□□ 2.18
COL9A2-201ENST00000372736 GMPSP49915 693 aaPredicted RBP28.69■■■□□ 2.18
COL9A2-201ENST00000372736 TNIP1Q15025 636 aa28.69■■■□□ 2.18
COL9A2-201ENST00000372736 DOK7Q18PE1 504 aa28.69■■■□□ 2.18
COL9A2-201ENST00000372736 GPRC5DQ9NZD1 345 aa28.69■■■□□ 2.18
COL9A2-201ENST00000372736 PSME4Q14997 1843 aa28.69■■■□□ 2.18
COL9A2-201ENST00000372736 ATP2B4P23634 1241 aa28.68■■■□□ 2.18
COL9A2-201ENST00000372736 HTRA3P83110 453 aa28.68■■■□□ 2.18
COL9A2-201ENST00000372736 ZC3H12CQ9C0D7 883 aaKnown RBP28.68■■■□□ 2.18
COL9A2-201ENST00000372736 ANKRD18BA2A2Z9 1011 aa28.67■■■□□ 2.18
COL9A2-201ENST00000372736 WTIPA6NIX2 430 aaPredicted RBP28.67■■■□□ 2.18
COL9A2-201ENST00000372736 LMBR1LQ6UX01 489 aa28.67■■■□□ 2.18
COL9A2-201ENST00000372736 PSMD14O00487 310 aa28.66■■■□□ 2.18
COL9A2-201ENST00000372736 NBPF7P0C2Y1 421 aaPredicted RBP28.66■■■□□ 2.18
COL9A2-201ENST00000372736 HNRNPUQ00839 825 aaKnown RBP eCLIP28.66■■■□□ 2.18
COL9A2-201ENST00000372736 KAZALD1Q96I82 304 aa28.66■■■□□ 2.18
COL9A2-201ENST00000372736 SUCLG2Q96I99 432 aa28.66■■■□□ 2.18
COL9A2-201ENST00000372736 MED23Q9ULK4 1368 aa28.65■■■□□ 2.18
COL9A2-201ENST00000372736 BRPF1P55201 1214 aaPredicted RBP28.65■■■□□ 2.18
COL9A2-201ENST00000372736 IFIT5Q13325 482 aaKnown RBP28.65■■■□□ 2.18
COL9A2-201ENST00000372736 MPHOSPH8Q99549 860 aa28.65■■■□□ 2.18
COL9A2-201ENST00000372736 KCNQ5Q9NR82 932 aa28.65■■■□□ 2.18
COL9A2-201ENST00000372736 CHMP3Q9Y3E7 222 aa28.65■■■□□ 2.18
COL9A2-201ENST00000372736 CCT4P50991 539 aaKnown RBP28.64■■■□□ 2.18
COL9A2-201ENST00000372736 RARSP54136 660 aaKnown RBP28.64■■■□□ 2.18
COL9A2-201ENST00000372736 DNAJC5GQ8N7S2 189 aa28.64■■■□□ 2.18
COL9A2-201ENST00000372736 CLEC11AQ9Y240 323 aa28.64■■■□□ 2.18
COL9A2-201ENST00000372736 PASKQ96RG2 1323 aa28.64■■■□□ 2.17
COL9A2-201ENST00000372736 USP50Q70EL3 339 aaPredicted RBP28.63■■■□□ 2.17
COL9A2-201ENST00000372736 ADARB2Q9NS39 739 aaKnown RBP28.63■■■□□ 2.17
COL9A2-201ENST00000372736 ZBTB12Q9Y330 459 aaPredicted RBP28.62■■■□□ 2.17
COL9A2-201ENST00000372736 ZNF646O15015 1829 aaPredicted RBP28.62■■■□□ 2.17
COL9A2-201ENST00000372736 ITGBL1O95965 494 aaPredicted RBP28.61■■■□□ 2.17
COL9A2-201ENST00000372736 CHRNDQ07001 517 aa28.61■■■□□ 2.17
COL9A2-201ENST00000372736 MAP1SQ66K74 1059 aaPredicted RBP28.61■■■□□ 2.17
COL9A2-201ENST00000372736 ANKRD2Q9GZV1 360 aa28.61■■■□□ 2.17
COL9A2-201ENST00000372736 NOB1Q9ULX3 412 aaKnown RBP28.61■■■□□ 2.17
COL9A2-201ENST00000372736 SHTN1A0MZ66 631 aa28.6■■■□□ 2.17
COL9A2-201ENST00000372736 LEMD3Q9Y2U8 911 aa28.6■■■□□ 2.17
COL9A2-201ENST00000372736 ZNF609O15014 1411 aa28.6■■■□□ 2.17
COL9A2-201ENST00000372736 G3V3G9 751 aa28.59■■■□□ 2.17
COL9A2-201ENST00000372736 CCDC57Q2TAC2 916 aa28.59■■■□□ 2.17
COL9A2-201ENST00000372736 DCAF8Q5TAQ9 597 aa28.59■■■□□ 2.17
COL9A2-201ENST00000372736 DPF2Q92785 391 aa28.59■■■□□ 2.17
COL9A2-201ENST00000372736 ZNF594Q96JF6 807 aaPredicted RBP28.59■■■□□ 2.17
COL9A2-201ENST00000372736 USP44Q9H0E7 712 aa28.59■■■□□ 2.17
COL9A2-201ENST00000372736 BICC1Q9H694 974 aaKnown RBP28.59■■■□□ 2.17
COL9A2-201ENST00000372736 RPS12P25398 132 aaKnown RBP28.58■■■□□ 2.17
COL9A2-201ENST00000372736 RABL6Q3YEC7 729 aaPredicted RBP28.58■■■□□ 2.17
COL9A2-201ENST00000372736 MICALL2Q8IY33 904 aa28.58■■■□□ 2.17
COL9A2-201ENST00000372736 CNTROBQ8N137 903 aa28.58■■■□□ 2.17
COL9A2-201ENST00000372736 ANKRD44Q8N8A2 993 aa28.58■■■□□ 2.17
COL9A2-201ENST00000372736 CNOT7Q9UIV1 285 aaKnown RBP28.58■■■□□ 2.17
COL9A2-201ENST00000372736 ZNF804BA4D1E1 1349 aa28.58■■■□□ 2.17
COL9A2-201ENST00000372736 VIL1P09327 827 aaKnown RBP28.57■■■□□ 2.16
COL9A2-201ENST00000372736 KLRK1P26718 216 aa28.57■■■□□ 2.16
COL9A2-201ENST00000372736 TXNRD3Q86VQ6 643 aa28.57■■■□□ 2.16
COL9A2-201ENST00000372736 TRPM4Q8TD43 1214 aa28.57■■■□□ 2.16
COL9A2-201ENST00000372736 KIF16BQ96L93 1317 aa28.57■■■□□ 2.16
COL9A2-201ENST00000372736 PODNQ7Z5L7 613 aa28.56■■■□□ 2.16
COL9A2-201ENST00000372736 API5Q9BZZ5 524 aaKnown RBP28.56■■■□□ 2.16
COL9A2-201ENST00000372736 TAF7LQ5H9L4 462 aa28.55■■■□□ 2.16
COL9A2-201ENST00000372736 KLRG1Q96E93 195 aa28.55■■■□□ 2.16
COL9A2-201ENST00000372736 CREBZFQ9NS37 354 aa28.55■■■□□ 2.16
COL9A2-201ENST00000372736 IRS2Q9Y4H2 1338 aa28.54■■■□□ 2.16
COL9A2-201ENST00000372736 HIRAP54198 1017 aaPredicted RBP28.54■■■□□ 2.16
COL9A2-201ENST00000372736 ZBED9Q6R2W3 1325 aa28.53■■■□□ 2.16
COL9A2-201ENST00000372736 H7C1D1 291 aa28.53■■■□□ 2.16
COL9A2-201ENST00000372736 TAF5LO75529 589 aa28.53■■■□□ 2.16
COL9A2-201ENST00000372736 KCNJ4P48050 445 aa28.53■■■□□ 2.16
COL9A2-201ENST00000372736 LDHAL6AQ6ZMR3 332 aa28.53■■■□□ 2.16
COL9A2-201ENST00000372736 HELBQ8NG08 1087 aaPredicted RBP28.53■■■□□ 2.16
COL9A2-201ENST00000372736 SNAP23O00161 211 aa28.52■■■□□ 2.16
COL9A2-201ENST00000372736 RSBN1LQ6PCB5 846 aaPredicted RBP28.52■■■□□ 2.16
COL9A2-201ENST00000372736 ARHGAP45Q92619 1136 aa28.52■■■□□ 2.16
COL9A2-201ENST00000372736 COA1Q9GZY4 146 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms