RNA–Protein interactions for RNA: ENST00000372417.1

YIPF3-201, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 406 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-201ENST00000372417 ECE2O60344 883 aa10.65□□□□□ -0.7
YIPF3-201ENST00000372417 NF2P35240 595 aa10.65□□□□□ -0.7
YIPF3-201ENST00000372417 WASHC4Q2M389 1173 aa10.65□□□□□ -0.7
YIPF3-201ENST00000372417 SPRYD7Q5W111 196 aa10.65□□□□□ -0.7
YIPF3-201ENST00000372417 KIF6Q6ZMV9 814 aa10.65□□□□□ -0.7
YIPF3-201ENST00000372417 PPP1R42Q7Z4L9 355 aa10.65□□□□□ -0.7
YIPF3-201ENST00000372417 IFNL1Q8IU54 200 aa10.65□□□□□ -0.7
YIPF3-201ENST00000372417 GAS2L2Q8NHY3 880 aa10.65□□□□□ -0.7
YIPF3-201ENST00000372417 MANSC4A6NHS7 340 aaPredicted RBP10.64□□□□□ -0.71
YIPF3-201ENST00000372417 MYCP01106 439 aaPredicted RBP10.64□□□□□ -0.71
YIPF3-201ENST00000372417 INHBEP58166 350 aa10.64□□□□□ -0.71
YIPF3-201ENST00000372417 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.64□□□□□ -0.71
YIPF3-201ENST00000372417 NGEFQ8N5V2 710 aa10.64□□□□□ -0.71
YIPF3-201ENST00000372417 DEFB123Q8N688 67 aa10.64□□□□□ -0.71
YIPF3-201ENST00000372417 POLR3GLQ9BT43 218 aa10.64□□□□□ -0.71
YIPF3-201ENST00000372417 OTOFQ9HC10 1997 aa10.64□□□□□ -0.71
YIPF3-201ENST00000372417 WTIPA6NIX2 430 aaPredicted RBP10.63□□□□□ -0.71
YIPF3-201ENST00000372417 RIMBP2O15034 1052 aa10.63□□□□□ -0.71
YIPF3-201ENST00000372417 ZNF280AP59817 542 aaPredicted RBP10.63□□□□□ -0.71
YIPF3-201ENST00000372417 SP3Q02447 781 aa10.63□□□□□ -0.71
YIPF3-201ENST00000372417 PRAMEF18Q5VWM3 479 aa10.63□□□□□ -0.71
YIPF3-201ENST00000372417 GPR153Q6NV75 609 aa10.63□□□□□ -0.71
YIPF3-201ENST00000372417 DDX46Q7L014 1031 aaKnown RBP10.63□□□□□ -0.71
YIPF3-201ENST00000372417 TMC4Q7Z404 712 aa10.63□□□□□ -0.71
YIPF3-201ENST00000372417 HTATIP2Q9BUP3 242 aa10.63□□□□□ -0.71
YIPF3-201ENST00000372417 KCNQ5Q9NR82 932 aa10.63□□□□□ -0.71
YIPF3-201ENST00000372417 SCAF8Q9UPN6 1271 aaKnown RBP10.63□□□□□ -0.71
YIPF3-201ENST00000372417 NR2E3Q9Y5X4 410 aa10.63□□□□□ -0.71
YIPF3-201ENST00000372417 PTCH2Q9Y6C5 1203 aa10.63□□□□□ -0.71
YIPF3-201ENST00000372417 IGF2BP3O00425 579 aaKnown RBP eCLIP10.62□□□□□ -0.71
YIPF3-201ENST00000372417 VIL1P09327 827 aaKnown RBP10.62□□□□□ -0.71
YIPF3-201ENST00000372417 PTPN12Q05209 780 aaKnown RBP10.62□□□□□ -0.71
YIPF3-201ENST00000372417 CRHR2Q13324 411 aa10.62□□□□□ -0.71
YIPF3-201ENST00000372417 GRAPQ13588 217 aa10.62□□□□□ -0.71
YIPF3-201ENST00000372417 ARHGEF6Q15052 776 aa10.62□□□□□ -0.71
YIPF3-201ENST00000372417 ARMC9Q7Z3E5 817 aa10.62□□□□□ -0.71
YIPF3-201ENST00000372417 ZNF34Q8IZ26 560 aa10.62□□□□□ -0.71
YIPF3-201ENST00000372417 GRAPLQ8TC17 118 aaPredicted RBP10.62□□□□□ -0.71
YIPF3-201ENST00000372417 EYSQ5T1H1 3165 aa10.62□□□□□ -0.71
YIPF3-201ENST00000372417 DLG5Q8TDM6 1919 aa10.61□□□□□ -0.71
YIPF3-201ENST00000372417 C6orf229H3BNL8 230 aa10.61□□□□□ -0.71
YIPF3-201ENST00000372417 ZBTB7BO15156 539 aaPredicted RBP10.61□□□□□ -0.71
YIPF3-201ENST00000372417 CAP1Q01518 475 aa10.61□□□□□ -0.71
YIPF3-201ENST00000372417 DOK7Q18PE1 504 aa10.61□□□□□ -0.71
YIPF3-201ENST00000372417 PARP10Q53GL7 1025 aa10.61□□□□□ -0.71
YIPF3-201ENST00000372417 SLC10A5Q5PT55 438 aa10.61□□□□□ -0.71
YIPF3-201ENST00000372417 TTLL7Q6ZT98 887 aa10.61□□□□□ -0.71
YIPF3-201ENST00000372417 NECTIN2Q92692 538 aa10.61□□□□□ -0.71
YIPF3-201ENST00000372417 EYA3Q99504 573 aa10.61□□□□□ -0.71
YIPF3-201ENST00000372417 ZBTB3Q9H5J0 574 aa10.61□□□□□ -0.71
YIPF3-201ENST00000372417 MYOZ2Q9NPC6 264 aa10.61□□□□□ -0.71
YIPF3-201ENST00000372417 MGAMO43451 1857 aa10.6□□□□□ -0.71
YIPF3-201ENST00000372417 PRKG1Q13976 671 aa10.6□□□□□ -0.71
YIPF3-201ENST00000372417 OTUD7BQ6GQQ9 843 aa10.6□□□□□ -0.71
YIPF3-201ENST00000372417 Q7L0L9 218 aa10.6□□□□□ -0.71
YIPF3-201ENST00000372417 AGBL3Q8NEM8 1001 aa10.6□□□□□ -0.71
YIPF3-201ENST00000372417 SHISA4Q96DD7 197 aa10.6□□□□□ -0.71
YIPF3-201ENST00000372417 UTP14AQ9BVJ6 771 aaKnown RBP10.6□□□□□ -0.71
YIPF3-201ENST00000372417 NSFL1CQ9UNZ2 370 aaKnown RBP10.6□□□□□ -0.71
YIPF3-201ENST00000372417 ERBB4Q15303 1308 aa10.59□□□□□ -0.71
YIPF3-201ENST00000372417 DIAPH1O60610 1272 aaKnown RBP10.59□□□□□ -0.71
YIPF3-201ENST00000372417 ZBTB48P10074 688 aaPredicted RBP10.59□□□□□ -0.71
YIPF3-201ENST00000372417 COL9A1P20849 921 aa10.59□□□□□ -0.71
YIPF3-201ENST00000372417 RSBN1LQ6PCB5 846 aaPredicted RBP10.59□□□□□ -0.71
YIPF3-201ENST00000372417 SH3TC2Q8TF17 1288 aa10.59□□□□□ -0.71
YIPF3-201ENST00000372417 PANK3Q9H999 370 aa10.59□□□□□ -0.71
YIPF3-201ENST00000372417 ANGEL1Q9UNK9 670 aaKnown RBP10.59□□□□□ -0.71
YIPF3-201ENST00000372417 PRUNE2Q8WUY3 3088 aa10.59□□□□□ -0.71
YIPF3-201ENST00000372417 G3V3G9 751 aa10.58□□□□□ -0.72
YIPF3-201ENST00000372417 USP17L8P0C7I0 530 aa10.58□□□□□ -0.72
YIPF3-201ENST00000372417 LDLRAD1Q5T700 205 aa10.58□□□□□ -0.72
YIPF3-201ENST00000372417 DCAF8Q5TAQ9 597 aa10.58□□□□□ -0.72
YIPF3-201ENST00000372417 GIGYF2Q6Y7W6 1299 aaKnown RBP10.58□□□□□ -0.72
YIPF3-201ENST00000372417 SLC10A4Q96EP9 437 aa10.58□□□□□ -0.72
YIPF3-201ENST00000372417 WNK4Q96J92 1243 aa10.58□□□□□ -0.72
YIPF3-201ENST00000372417 MTMR10Q9NXD2 777 aa10.58□□□□□ -0.72
YIPF3-201ENST00000372417 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.58□□□□□ -0.72
YIPF3-201ENST00000372417 POLLQ9UGP5 575 aa10.58□□□□□ -0.72
YIPF3-201ENST00000372417 COL4A1P02462 1669 aa10.57□□□□□ -0.72
YIPF3-201ENST00000372417 TTC28Q96AY4 2481 aa10.57□□□□□ -0.72
YIPF3-201ENST00000372417 SPEF2Q9C093 1822 aa10.57□□□□□ -0.72
YIPF3-201ENST00000372417 HCLS1P14317 486 aaPredicted RBP10.57□□□□□ -0.72
YIPF3-201ENST00000372417 NKX2-3Q8TAU0 364 aa10.57□□□□□ -0.72
YIPF3-201ENST00000372417 RRP7AQ9Y3A4 280 aaKnown RBP10.57□□□□□ -0.72
YIPF3-201ENST00000372417 LAMA2P24043 3122 aaKnown RBP10.56□□□□□ -0.72
YIPF3-201ENST00000372417 COL1A1P02452 1464 aaPredicted RBP10.56□□□□□ -0.72
YIPF3-201ENST00000372417 MYL6BP14649 208 aa10.56□□□□□ -0.72
YIPF3-201ENST00000372417 GPSM2P81274 684 aa10.56□□□□□ -0.72
YIPF3-201ENST00000372417 NBPF9Q3BBW0 867 aa10.56□□□□□ -0.72
YIPF3-201ENST00000372417 UBE2Q1Q7Z7E8 422 aa10.56□□□□□ -0.72
YIPF3-201ENST00000372417 ZC3H12CQ9C0D7 883 aaKnown RBP10.56□□□□□ -0.72
YIPF3-201ENST00000372417 STAP2Q9UGK3 403 aa10.56□□□□□ -0.72
YIPF3-201ENST00000372417 TBC1D16Q8TBP0 767 aa10.55□□□□□ -0.72
YIPF3-201ENST00000372417 GMLQ99445 158 aa10.55□□□□□ -0.72
YIPF3-201ENST00000372417 MUC3AQ02505 3323 aa10.55□□□□□ -0.72
YIPF3-201ENST00000372417 SSC5DA1L4H1 1573 aa10.55□□□□□ -0.72
YIPF3-201ENST00000372417 COL3A1P02461 1466 aaPredicted RBP10.55□□□□□ -0.72
YIPF3-201ENST00000372417 U2SURPO15042 1029 aaKnown RBP10.54□□□□□ -0.72
YIPF3-201ENST00000372417 EVI5O60447 810 aa10.54□□□□□ -0.72
YIPF3-201ENST00000372417 PLA2G5P39877 138 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms