RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 MRPS9P82933 396 aaKnown RBP17.28■□□□□ 0.36
COL5A1-201ENST00000371817 GOLGA6BA6NDN3 693 aa17.28■□□□□ 0.36
COL5A1-201ENST00000371817 DCAF8L1A6NGE4 600 aa17.28■□□□□ 0.36
COL5A1-201ENST00000371817 SMIM24O75264 130 aa17.28■□□□□ 0.36
COL5A1-201ENST00000371817 USP48Q86UV5 1035 aa17.28■□□□□ 0.36
COL5A1-201ENST00000371817 LRRD1A4D1F6 860 aa17.28■□□□□ 0.36
COL5A1-201ENST00000371817 PPP1R7Q15435 360 aa17.28■□□□□ 0.36
COL5A1-201ENST00000371817 SPATS2Q86XZ4 545 aaKnown RBP17.28■□□□□ 0.36
COL5A1-201ENST00000371817 CCDC194A0A1B0GVG4 234 aa17.28■□□□□ 0.36
COL5A1-201ENST00000371817 FAF1Q9UNN5 650 aaPredicted RBP17.28■□□□□ 0.36
COL5A1-201ENST00000371817 RIOK3O14730 519 aaKnown RBP17.27■□□□□ 0.36
COL5A1-201ENST00000371817 UBA7P41226 1012 aa17.27■□□□□ 0.36
COL5A1-201ENST00000371817 PPFIA1Q13136 1202 aa17.27■□□□□ 0.36
COL5A1-201ENST00000371817 SYCP3Q8IZU3 236 aa17.27■□□□□ 0.36
COL5A1-201ENST00000371817 LRRC27Q9C0I9 530 aa17.27■□□□□ 0.36
COL5A1-201ENST00000371817 GPR161Q8N6U8 529 aaKnown RBP17.27■□□□□ 0.36
COL5A1-201ENST00000371817 LRP2BPQ9P2M1 347 aa17.27■□□□□ 0.36
COL5A1-201ENST00000371817 CCDC42Q96M95 316 aa17.27■□□□□ 0.35
COL5A1-201ENST00000371817 STAC3Q96MF2 364 aa17.27■□□□□ 0.35
COL5A1-201ENST00000371817 CAPN7Q9Y6W3 813 aa17.27■□□□□ 0.35
COL5A1-201ENST00000371817 HSPA1LP34931 641 aa17.26■□□□□ 0.35
COL5A1-201ENST00000371817 CCT2P78371 535 aaKnown RBP17.26■□□□□ 0.35
COL5A1-201ENST00000371817 TACC3Q9Y6A5 838 aa17.26■□□□□ 0.35
COL5A1-201ENST00000371817 RUFY4Q6ZNE9 571 aa17.26■□□□□ 0.35
COL5A1-201ENST00000371817 GGNBP2Q9H3C7 697 aa17.26■□□□□ 0.35
COL5A1-201ENST00000371817 TBC1D9Q6ZT07 1266 aa17.26■□□□□ 0.35
COL5A1-201ENST00000371817 RASEFQ8IZ41 740 aa17.26■□□□□ 0.35
COL5A1-201ENST00000371817 BICD1Q96G01 975 aa17.26■□□□□ 0.35
COL5A1-201ENST00000371817 EXOC6BQ9Y2D4 811 aa17.26■□□□□ 0.35
COL5A1-201ENST00000371817 HIP1RO75146 1068 aa17.26■□□□□ 0.35
COL5A1-201ENST00000371817 FCHSD2O94868 740 aa17.26■□□□□ 0.35
COL5A1-201ENST00000371817 OAS2P29728 719 aaKnown RBP17.26■□□□□ 0.35
COL5A1-201ENST00000371817 LRRC23Q53EV4 343 aaPredicted RBP17.26■□□□□ 0.35
COL5A1-201ENST00000371817 SYNCQ9H7C4 482 aa17.26■□□□□ 0.35
COL5A1-201ENST00000371817 VEZTQ9HBM0 779 aa17.26■□□□□ 0.35
COL5A1-201ENST00000371817 DNAJC8O75937 253 aaPredicted RBP17.26■□□□□ 0.35
COL5A1-201ENST00000371817 HOMEZQ8IX15 550 aa17.26■□□□□ 0.35
COL5A1-201ENST00000371817 CNPY2Q9Y2B0 182 aa17.26■□□□□ 0.35
COL5A1-201ENST00000371817 UTP11Q9Y3A2 253 aaKnown RBP17.26■□□□□ 0.35
COL5A1-201ENST00000371817 CALCOCO2Q13137 446 aa17.26■□□□□ 0.35
COL5A1-201ENST00000371817 KARSQ15046 597 aaKnown RBP17.26■□□□□ 0.35
COL5A1-201ENST00000371817 VSIG1Q86XK7 387 aa17.26■□□□□ 0.35
COL5A1-201ENST00000371817 LARSQ9P2J5 1176 aaKnown RBP17.26■□□□□ 0.35
COL5A1-201ENST00000371817 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.26■□□□□ 0.35
COL5A1-201ENST00000371817 POLR3DP05423 398 aaPredicted RBP17.25■□□□□ 0.35
COL5A1-201ENST00000371817 FHOD3Q2V2M9 1422 aa17.25■□□□□ 0.35
COL5A1-201ENST00000371817 TBC1D31Q96DN5 1066 aa17.25■□□□□ 0.35
COL5A1-201ENST00000371817 NAPBQ9H115 298 aa17.25■□□□□ 0.35
COL5A1-201ENST00000371817 DNAJC25Q9H1X3 360 aa17.25■□□□□ 0.35
COL5A1-201ENST00000371817 THEGQ9P2T0 379 aa17.25■□□□□ 0.35
COL5A1-201ENST00000371817 IFT20Q8IY31 132 aa17.25■□□□□ 0.35
COL5A1-201ENST00000371817 PPM1FP49593 454 aaPredicted RBP17.25■□□□□ 0.35
COL5A1-201ENST00000371817 IQCA1Q86XH1 822 aa17.25■□□□□ 0.35
COL5A1-201ENST00000371817 RIPOR2Q9Y4F9 1068 aa17.25■□□□□ 0.35
COL5A1-201ENST00000371817 IDH1O75874 414 aaKnown RBP17.24■□□□□ 0.35
COL5A1-201ENST00000371817 ELF2Q15723 593 aa17.24■□□□□ 0.35
COL5A1-201ENST00000371817 CXorf38Q8TB03 319 aa17.24■□□□□ 0.35
COL5A1-201ENST00000371817 MRFAP1L1Q96HT8 127 aa17.24■□□□□ 0.35
COL5A1-201ENST00000371817 CEP126Q9P2H0 1117 aa17.24■□□□□ 0.35
COL5A1-201ENST00000371817 E7EVH7 732 aa17.24■□□□□ 0.35
COL5A1-201ENST00000371817 NLRP5P59047 1200 aa17.24■□□□□ 0.35
COL5A1-201ENST00000371817 HSP90AA4PQ58FG1 418 aa17.24■□□□□ 0.35
COL5A1-201ENST00000371817 Q9H521 79 aa17.24■□□□□ 0.35
COL5A1-201ENST00000371817 NUTM1Q86Y26 1132 aa17.24■□□□□ 0.35
COL5A1-201ENST00000371817 SEPT10Q9P0V9 454 aa17.24■□□□□ 0.35
COL5A1-201ENST00000371817 WDR97A6NE52 1622 aa17.24■□□□□ 0.35
COL5A1-201ENST00000371817 LMOD1P29536 600 aaPredicted RBP17.24■□□□□ 0.35
COL5A1-201ENST00000371817 BMP2KLQ5H9B9 411 aa17.24■□□□□ 0.35
COL5A1-201ENST00000371817 FAN1Q9Y2M0 1017 aa17.24■□□□□ 0.35
COL5A1-201ENST00000371817 CATIPQ7Z7H3 387 aa17.24■□□□□ 0.35
COL5A1-201ENST00000371817 PDS5BQ9NTI5 1447 aa17.23■□□□□ 0.35
COL5A1-201ENST00000371817 CLUL1Q15846 466 aa17.23■□□□□ 0.35
COL5A1-201ENST00000371817 CNGA4Q8IV77 575 aa17.23■□□□□ 0.35
COL5A1-201ENST00000371817 BCAP29Q9UHQ4 241 aa17.23■□□□□ 0.35
COL5A1-201ENST00000371817 MAP3K21Q5TCX8 1036 aa17.23■□□□□ 0.35
COL5A1-201ENST00000371817 IDEP14735 1019 aa17.23■□□□□ 0.35
COL5A1-201ENST00000371817 DMTNQ08495 405 aa17.23■□□□□ 0.35
COL5A1-201ENST00000371817 PSMD6Q15008 389 aa17.23■□□□□ 0.35
COL5A1-201ENST00000371817 STAG1Q8WVM7 1258 aa17.23■□□□□ 0.35
COL5A1-201ENST00000371817 HVCN1Q96D96 273 aa17.23■□□□□ 0.35
COL5A1-201ENST00000371817 TACO1Q9BSH4 297 aaKnown RBP17.23■□□□□ 0.35
COL5A1-201ENST00000371817 SNX16P57768 344 aa17.23■□□□□ 0.35
COL5A1-201ENST00000371817 RASIP1Q5U651 963 aa17.23■□□□□ 0.35
COL5A1-201ENST00000371817 PHLDB3Q6NSJ2 640 aa17.23■□□□□ 0.35
COL5A1-201ENST00000371817 CROCCP2Q86T23 111 aa17.23■□□□□ 0.35
COL5A1-201ENST00000371817 ZNF213O14771 459 aa17.23■□□□□ 0.35
COL5A1-201ENST00000371817 PLCB1Q9NQ66 1216 aa17.23■□□□□ 0.35
COL5A1-201ENST00000371817 STK38LQ9Y2H1 464 aa17.23■□□□□ 0.35
COL5A1-201ENST00000371817 CCDC65Q8IXS2 484 aa17.23■□□□□ 0.35
COL5A1-201ENST00000371817 BAG1Q99933 345 aaPredicted RBP17.23■□□□□ 0.35
COL5A1-201ENST00000371817 UTP14AQ9BVJ6 771 aaKnown RBP17.23■□□□□ 0.35
COL5A1-201ENST00000371817 STAT6P42226 847 aa17.22■□□□□ 0.35
COL5A1-201ENST00000371817 SNCBQ16143 134 aa17.22■□□□□ 0.35
COL5A1-201ENST00000371817 HSP90AA5PQ58FG0 334 aa17.22■□□□□ 0.35
COL5A1-201ENST00000371817 LRRC43Q8N309 656 aa17.22■□□□□ 0.35
COL5A1-201ENST00000371817 ACTN4O43707 911 aaKnown RBP17.22■□□□□ 0.35
COL5A1-201ENST00000371817 PSMA7O14818 248 aa17.22■□□□□ 0.35
COL5A1-201ENST00000371817 PPFIA3O75145 1194 aa17.22■□□□□ 0.35
COL5A1-201ENST00000371817 WDHD1O75717 1129 aaPredicted RBP17.22■□□□□ 0.35
COL5A1-201ENST00000371817 C8orf74Q6P047 294 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms