RNA–Protein interactions for RNA: ENST00000371242.6

RAE1-201, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAE1, Length 2,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-201ENST00000371242 NCLP19338 710 aaKnown RBP13.31□□□□□ -0.28
RAE1-201ENST00000371242 SYT1P21579 422 aa13.31□□□□□ -0.28
RAE1-201ENST00000371242 IL6STP40189 918 aaPredicted RBP13.31□□□□□ -0.28
RAE1-201ENST00000371242 PRIM1P49642 420 aaKnown RBP13.31□□□□□ -0.28
RAE1-201ENST00000371242 IFIT5Q13325 482 aaKnown RBP13.31□□□□□ -0.28
RAE1-201ENST00000371242 CCDC83Q8IWF9 413 aa13.31□□□□□ -0.28
RAE1-201ENST00000371242 TAF6LQ9Y6J9 622 aa13.31□□□□□ -0.28
RAE1-201ENST00000371242 ERVV-1B6SEH8 477 aa13.31□□□□□ -0.28
RAE1-201ENST00000371242 CHGBP05060 677 aa13.31□□□□□ -0.28
RAE1-201ENST00000371242 ZSCAN22P10073 491 aaPredicted RBP13.31□□□□□ -0.28
RAE1-201ENST00000371242 ST3GAL1Q11201 340 aa13.31□□□□□ -0.28
RAE1-201ENST00000371242 ZSCAN23Q3MJ62 389 aa13.31□□□□□ -0.28
RAE1-201ENST00000371242 TPCN1Q9ULQ1 816 aa13.31□□□□□ -0.28
RAE1-201ENST00000371242 CCDC9Q9Y3X0 531 aaKnown RBP13.31□□□□□ -0.28
RAE1-201ENST00000371242 CCDC129Q6ZRS4 1044 aa13.3□□□□□ -0.28
RAE1-201ENST00000371242 NWD2Q9ULI1 1742 aa13.3□□□□□ -0.28
RAE1-201ENST00000371242 LAMA4Q16363 1823 aa13.3□□□□□ -0.28
RAE1-201ENST00000371242 GPTP24298 496 aa13.3□□□□□ -0.28
RAE1-201ENST00000371242 GJB2P29033 226 aa13.3□□□□□ -0.28
RAE1-201ENST00000371242 COL9A3Q14050 684 aaPredicted RBP13.3□□□□□ -0.28
RAE1-201ENST00000371242 TAF7LQ5H9L4 462 aa13.3□□□□□ -0.28
RAE1-201ENST00000371242 ZMYM1Q5SVZ6 1142 aa13.3□□□□□ -0.28
RAE1-201ENST00000371242 TTLL11Q8NHH1 800 aa13.3□□□□□ -0.28
RAE1-201ENST00000371242 PDIA4P13667 645 aaKnown RBP13.29□□□□□ -0.28
RAE1-201ENST00000371242 DDB1Q16531 1140 aa13.29□□□□□ -0.28
RAE1-201ENST00000371242 CCDC158Q5M9N0 1113 aa13.29□□□□□ -0.28
RAE1-201ENST00000371242 NGLY1Q96IV0 654 aa13.29□□□□□ -0.28
RAE1-201ENST00000371242 DSCC1Q9BVC3 393 aa13.29□□□□□ -0.28
RAE1-201ENST00000371242 CICQ96RK0 1608 aaPredicted RBP13.29□□□□□ -0.28
RAE1-201ENST00000371242 MYH7P12883 1935 aa13.29□□□□□ -0.28
RAE1-201ENST00000371242 CYP21A2P08686 494 aa13.29□□□□□ -0.28
RAE1-201ENST00000371242 TOB2Q14106 344 aaPredicted RBP13.29□□□□□ -0.28
RAE1-201ENST00000371242 DZIP3Q86Y13 1208 aaKnown RBP13.29□□□□□ -0.28
RAE1-201ENST00000371242 TMEM87AQ8NBN3 555 aa13.29□□□□□ -0.28
RAE1-201ENST00000371242 XAGE2Q96GT9 111 aa13.29□□□□□ -0.28
RAE1-201ENST00000371242 CCDC85AQ96PX6 553 aaPredicted RBP13.29□□□□□ -0.28
RAE1-201ENST00000371242 NEK1Q96PY6 1258 aa13.29□□□□□ -0.28
RAE1-201ENST00000371242 ATP6V1DQ9Y5K8 247 aa13.29□□□□□ -0.28
RAE1-201ENST00000371242 RIC1Q4ADV7 1423 aa13.29□□□□□ -0.28
RAE1-201ENST00000371242 F13A1P00488 732 aa13.28□□□□□ -0.28
RAE1-201ENST00000371242 CTSWP56202 376 aa13.28□□□□□ -0.28
RAE1-201ENST00000371242 SYNE4Q8N205 404 aa13.28□□□□□ -0.28
RAE1-201ENST00000371242 RIPOR2Q9Y4F9 1068 aa13.28□□□□□ -0.28
RAE1-201ENST00000371242 ABCC12Q96J65 1359 aa13.28□□□□□ -0.28
RAE1-201ENST00000371242 RREB1Q92766 1687 aa13.28□□□□□ -0.28
RAE1-201ENST00000371242 IRS4O14654 1257 aaPredicted RBP13.28□□□□□ -0.28
RAE1-201ENST00000371242 RNF113AO15541 343 aaKnown RBP13.28□□□□□ -0.28
RAE1-201ENST00000371242 ITGA6P23229 1130 aa13.28□□□□□ -0.28
RAE1-201ENST00000371242 NECAB1Q8N987 351 aa13.28□□□□□ -0.28
RAE1-201ENST00000371242 GREM2Q9H772 168 aa13.28□□□□□ -0.28
RAE1-201ENST00000371242 TMEM63CQ9P1W3 806 aa13.28□□□□□ -0.28
RAE1-201ENST00000371242 NSFL1CQ9UNZ2 370 aaKnown RBP13.28□□□□□ -0.28
RAE1-201ENST00000371242 EIF5P55010 431 aaKnown RBP13.27□□□□□ -0.29
RAE1-201ENST00000371242 LRRFIP1Q32MZ4 808 aaKnown RBP13.27□□□□□ -0.29
RAE1-201ENST00000371242 TTC39AQ5SRH9 613 aa13.27□□□□□ -0.29
RAE1-201ENST00000371242 ZNF34Q8IZ26 560 aa13.27□□□□□ -0.29
RAE1-201ENST00000371242 TCEANC2Q96MN5 208 aa13.27□□□□□ -0.29
RAE1-201ENST00000371242 TRMT112Q9UI30 125 aaKnown RBP13.27□□□□□ -0.29
RAE1-201ENST00000371242 MTMR6Q9Y217 621 aa13.27□□□□□ -0.29
RAE1-201ENST00000371242 AKAP11Q9UKA4 1901 aa13.27□□□□□ -0.29
RAE1-201ENST00000371242 ANKRD18BA2A2Z9 1011 aa13.27□□□□□ -0.29
RAE1-201ENST00000371242 PDE8AO60658 829 aa13.27□□□□□ -0.29
RAE1-201ENST00000371242 ADORA1P30542 326 aa13.27□□□□□ -0.29
RAE1-201ENST00000371242 GORABQ5T7V8 394 aa13.27□□□□□ -0.29
RAE1-201ENST00000371242 LDHAL6AQ6ZMR3 332 aa13.27□□□□□ -0.29
RAE1-201ENST00000371242 RBM27Q9P2N5 1060 aaKnown RBP13.27□□□□□ -0.29
RAE1-201ENST00000371242 TBC1D2BQ9UPU7 963 aa13.27□□□□□ -0.29
RAE1-201ENST00000371242 MAST3O60307 1309 aa13.26□□□□□ -0.29
RAE1-201ENST00000371242 SPATA31A5Q5VU36 1347 aa13.26□□□□□ -0.29
RAE1-201ENST00000371242 UBN2Q6ZU65 1347 aa13.26□□□□□ -0.29
RAE1-201ENST00000371242 SPATA31A7Q8IWB4 1347 aa13.26□□□□□ -0.29
RAE1-201ENST00000371242 USP48Q86UV5 1035 aa13.26□□□□□ -0.29
RAE1-201ENST00000371242 ZFYP08048 801 aaPredicted RBP13.25□□□□□ -0.29
RAE1-201ENST00000371242 HMGB1P09429 215 aaKnown RBP13.25□□□□□ -0.29
RAE1-201ENST00000371242 HSPD1P10809 573 aaKnown RBP13.25□□□□□ -0.29
RAE1-201ENST00000371242 FKBP4Q02790 459 aaKnown RBP eCLIP13.25□□□□□ -0.29
RAE1-201ENST00000371242 FOXD4L6Q3SYB3 417 aaPredicted RBP13.25□□□□□ -0.29
RAE1-201ENST00000371242 SLFNL1Q499Z3 407 aa13.25□□□□□ -0.29
RAE1-201ENST00000371242 METTL24Q5JXM2 366 aa13.25□□□□□ -0.29
RAE1-201ENST00000371242 FOXD4L3Q6VB84 417 aaPredicted RBP13.25□□□□□ -0.29
RAE1-201ENST00000371242 FAM43AQ8N2R8 423 aa13.25□□□□□ -0.29
RAE1-201ENST00000371242 SLIT2O94813 1529 aa13.25□□□□□ -0.29
RAE1-201ENST00000371242 BCL9LQ86UU0 1499 aa13.25□□□□□ -0.29
RAE1-201ENST00000371242 MYH14Q7Z406 1995 aaKnown RBP13.25□□□□□ -0.29
RAE1-201ENST00000371242 LRP5O75197 1615 aa13.25□□□□□ -0.29
RAE1-201ENST00000371242 PDCP20941 246 aa13.25□□□□□ -0.29
RAE1-201ENST00000371242 ATP2B3Q16720 1220 aa13.25□□□□□ -0.29
RAE1-201ENST00000371242 INTS5Q6P9B9 1019 aaKnown RBP13.25□□□□□ -0.29
RAE1-201ENST00000371242 BARGINQ6ZT62 677 aa13.25□□□□□ -0.29
RAE1-201ENST00000371242 MARCH10Q8NA82 808 aaPredicted RBP13.25□□□□□ -0.29
RAE1-201ENST00000371242 AK7Q96M32 723 aa13.25□□□□□ -0.29
RAE1-201ENST00000371242 GDPD2Q9HCC8 539 aa13.25□□□□□ -0.29
RAE1-201ENST00000371242 RTN4Q9NQC3 1192 aaKnown RBP13.25□□□□□ -0.29
RAE1-201ENST00000371242 CCDC87Q9NVE4 849 aa13.25□□□□□ -0.29
RAE1-201ENST00000371242 NASPP49321 788 aaPredicted RBP13.24□□□□□ -0.29
RAE1-201ENST00000371242 LRSAM1Q6UWE0 723 aa13.24□□□□□ -0.29
RAE1-201ENST00000371242 VGLL2Q8N8G2 317 aa13.24□□□□□ -0.29
RAE1-201ENST00000371242 EP400Q96L91 3159 aa13.24□□□□□ -0.29
RAE1-201ENST00000371242 ATP6V1AP38606 617 aa13.24□□□□□ -0.29
RAE1-201ENST00000371242 LARP1BQ659C4 914 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms