RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 PTMSP20962 102 aa15.31■□□□□ 0.04
GPC3-201ENST00000370818 KCNJ4P48050 445 aa15.31■□□□□ 0.04
GPC3-201ENST00000370818 EIF5P55010 431 aaKnown RBP15.31■□□□□ 0.04
GPC3-201ENST00000370818 IFIT5Q13325 482 aaKnown RBP15.31■□□□□ 0.04
GPC3-201ENST00000370818 UTP14CQ5TAP6 766 aaKnown RBP15.31■□□□□ 0.04
GPC3-201ENST00000370818 TTLL11Q8NHH1 800 aa15.31■□□□□ 0.04
GPC3-201ENST00000370818 NOL7Q9UMY1 257 aaKnown RBP15.31■□□□□ 0.04
GPC3-201ENST00000370818 TAF6LQ9Y6J9 622 aa15.31■□□□□ 0.04
GPC3-201ENST00000370818 RPAP1Q9BWH6 1393 aaPredicted RBP15.31■□□□□ 0.04
GPC3-201ENST00000370818 A0A0G2JS52 829 aa15.31■□□□□ 0.04
GPC3-201ENST00000370818 DYNC1I1O14576 645 aa15.31■□□□□ 0.04
GPC3-201ENST00000370818 BRD1O95696 1058 aa15.31■□□□□ 0.04
GPC3-201ENST00000370818 VPS53Q5VIR6 699 aa15.31■□□□□ 0.04
GPC3-201ENST00000370818 SEC62Q99442 399 aaKnown RBP15.31■□□□□ 0.04
GPC3-201ENST00000370818 GREM2Q9H772 168 aa15.31■□□□□ 0.04
GPC3-201ENST00000370818 LIMCH1Q9UPQ0 1083 aa15.31■□□□□ 0.04
GPC3-201ENST00000370818 NWD2Q9ULI1 1742 aa15.3■□□□□ 0.04
GPC3-201ENST00000370818 LOC102724428A0A0B4J2F2 783 aa15.3■□□□□ 0.04
GPC3-201ENST00000370818 GOLIM4O00461 696 aa15.3■□□□□ 0.04
GPC3-201ENST00000370818 SIK1P57059 783 aa15.3■□□□□ 0.04
GPC3-201ENST00000370818 ZNF34Q8IZ26 560 aa15.3■□□□□ 0.04
GPC3-201ENST00000370818 PRDM10Q9NQV6 1147 aa15.3■□□□□ 0.04
GPC3-201ENST00000370818 PAG1Q9NWQ8 432 aa15.3■□□□□ 0.04
GPC3-201ENST00000370818 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.3■□□□□ 0.04
GPC3-201ENST00000370818 CYP46A1Q9Y6A2 500 aa15.3■□□□□ 0.04
GPC3-201ENST00000370818 PALLDQ8WX93 1383 aa15.3■□□□□ 0.04
GPC3-201ENST00000370818 GOLGA6L22H0YM25 854 aa15.3■□□□□ 0.04
GPC3-201ENST00000370818 ATP6V1AP38606 617 aa15.3■□□□□ 0.04
GPC3-201ENST00000370818 CTSWP56202 376 aa15.3■□□□□ 0.04
GPC3-201ENST00000370818 ITPK1Q13572 414 aa15.3■□□□□ 0.04
GPC3-201ENST00000370818 USPL1Q5W0Q7 1092 aa15.3■□□□□ 0.04
GPC3-201ENST00000370818 MCTP1Q6DN14 999 aa15.3■□□□□ 0.04
GPC3-201ENST00000370818 PDRG1Q9NUG6 133 aa15.3■□□□□ 0.04
GPC3-201ENST00000370818 TRMT112Q9UI30 125 aaKnown RBP15.3■□□□□ 0.04
GPC3-201ENST00000370818 IRS4O14654 1257 aaPredicted RBP15.29■□□□□ 0.04
GPC3-201ENST00000370818 ITGA6P23229 1130 aa15.29■□□□□ 0.04
GPC3-201ENST00000370818 CRKLP46109 303 aaKnown RBP15.29■□□□□ 0.04
GPC3-201ENST00000370818 DMTNQ08495 405 aa15.29■□□□□ 0.04
GPC3-201ENST00000370818 CCDC129Q6ZRS4 1044 aa15.29■□□□□ 0.04
GPC3-201ENST00000370818 CHAMP1Q96JM3 812 aa15.29■□□□□ 0.04
GPC3-201ENST00000370818 CCDC87Q9NVE4 849 aa15.29■□□□□ 0.04
GPC3-201ENST00000370818 ANKRD36CQ5JPF3 1778 aa15.29■□□□□ 0.04
GPC3-201ENST00000370818 LARGE1O95461 756 aa15.29■□□□□ 0.04
GPC3-201ENST00000370818 ADORA1P30542 326 aa15.29■□□□□ 0.04
GPC3-201ENST00000370818 ARID3AQ99856 593 aa15.29■□□□□ 0.04
GPC3-201ENST00000370818 RIPOR2Q9Y4F9 1068 aa15.29■□□□□ 0.04
GPC3-201ENST00000370818 KCNQ2O43526 872 aa15.28■□□□□ 0.04
GPC3-201ENST00000370818 TSGA10IPQ3SY00 556 aa15.28■□□□□ 0.04
GPC3-201ENST00000370818 SLFNL1Q499Z3 407 aa15.28■□□□□ 0.04
GPC3-201ENST00000370818 MCMDC2Q4G0Z9 681 aa15.28■□□□□ 0.04
GPC3-201ENST00000370818 TAF7LQ5H9L4 462 aa15.28■□□□□ 0.04
GPC3-201ENST00000370818 RIC1Q4ADV7 1423 aa15.28■□□□□ 0.04
GPC3-201ENST00000370818 NUP98P52948 1817 aa15.28■□□□□ 0.04
GPC3-201ENST00000370818 SH3TC1Q8TE82 1336 aa15.28■□□□□ 0.04
GPC3-201ENST00000370818 IFIT1P09914 478 aaKnown RBP15.28■□□□□ 0.04
GPC3-201ENST00000370818 RNF20Q5VTR2 975 aa15.28■□□□□ 0.04
GPC3-201ENST00000370818 FOXD4L5Q5VV16 416 aaPredicted RBP15.28■□□□□ 0.04
GPC3-201ENST00000370818 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.28■□□□□ 0.04
GPC3-201ENST00000370818 FOXD4L4Q8WXT5 416 aaPredicted RBP15.28■□□□□ 0.04
GPC3-201ENST00000370818 XAGE2Q96GT9 111 aa15.28■□□□□ 0.04
GPC3-201ENST00000370818 LMBRD1Q9NUN5 540 aa15.28■□□□□ 0.04
GPC3-201ENST00000370818 AKAP2Q9Y2D5 859 aa15.28■□□□□ 0.04
GPC3-201ENST00000370818 ZSCAN20P17040 1043 aaPredicted RBP15.27■□□□□ 0.04
GPC3-201ENST00000370818 HMG20BQ9P0W2 317 aa15.27■□□□□ 0.03
GPC3-201ENST00000370818 BCL9LQ86UU0 1499 aa15.26■□□□□ 0.03
GPC3-201ENST00000370818 PDE8AO60658 829 aa15.26■□□□□ 0.03
GPC3-201ENST00000370818 PSMA5P28066 241 aa15.26■□□□□ 0.03
GPC3-201ENST00000370818 PDE4CQ08493 712 aa15.26■□□□□ 0.03
GPC3-201ENST00000370818 FAM98CQ17RN3 349 aaKnown RBP15.26■□□□□ 0.03
GPC3-201ENST00000370818 LDHAL6AQ6ZMR3 332 aa15.26■□□□□ 0.03
GPC3-201ENST00000370818 TICAM2Q86XR7 235 aa15.26■□□□□ 0.03
GPC3-201ENST00000370818 CAMTA2O94983 1202 aa15.26■□□□□ 0.03
GPC3-201ENST00000370818 KLHL40Q2TBA0 621 aa15.26■□□□□ 0.03
GPC3-201ENST00000370818 ANKRD18BA2A2Z9 1011 aa15.25■□□□□ 0.03
GPC3-201ENST00000370818 UBAP1LF5GYI3 381 aa15.25■□□□□ 0.03
GPC3-201ENST00000370818 ST3GAL1Q11201 340 aa15.25■□□□□ 0.03
GPC3-201ENST00000370818 ZMYM1Q5SVZ6 1142 aa15.25■□□□□ 0.03
GPC3-201ENST00000370818 PDLIM2Q96JY6 352 aa15.25■□□□□ 0.03
GPC3-201ENST00000370818 CCDC94Q9BW85 323 aaPredicted RBP15.25■□□□□ 0.03
GPC3-201ENST00000370818 HELLSQ9NRZ9 838 aa15.25■□□□□ 0.03
GPC3-201ENST00000370818 SCARF1Q14162 830 aa15.25■□□□□ 0.03
GPC3-201ENST00000370818 CCDC158Q5M9N0 1113 aa15.25■□□□□ 0.03
GPC3-201ENST00000370818 SUSD4Q5VX71 490 aa15.25■□□□□ 0.03
GPC3-201ENST00000370818 VGLL2Q8N8G2 317 aa15.25■□□□□ 0.03
GPC3-201ENST00000370818 C8orf37Q96NL8 207 aa15.25■□□□□ 0.03
GPC3-201ENST00000370818 TPCN1Q9ULQ1 816 aa15.25■□□□□ 0.03
GPC3-201ENST00000370818 DDX49Q9Y6V7 483 aaKnown RBP15.25■□□□□ 0.03
GPC3-201ENST00000370818 RREB1Q92766 1687 aa15.24■□□□□ 0.03
GPC3-201ENST00000370818 RPS6KB1P23443 525 aa15.24■□□□□ 0.03
GPC3-201ENST00000370818 ME3Q16798 604 aa15.24■□□□□ 0.03
GPC3-201ENST00000370818 METTL24Q5JXM2 366 aa15.24■□□□□ 0.03
GPC3-201ENST00000370818 BLOC1S2Q6QNY1 142 aa15.24■□□□□ 0.03
GPC3-201ENST00000370818 CICQ96RK0 1608 aaPredicted RBP15.24■□□□□ 0.03
GPC3-201ENST00000370818 FKBP4Q02790 459 aaKnown RBP eCLIP15.24■□□□□ 0.03
GPC3-201ENST00000370818 VPS72Q15906 364 aa15.24■□□□□ 0.03
GPC3-201ENST00000370818 TTC39AQ5SRH9 613 aa15.24■□□□□ 0.03
GPC3-201ENST00000370818 ZSCAN31Q96LW9 406 aaPredicted RBP15.24■□□□□ 0.03
GPC3-201ENST00000370818 TCEANC2Q96MN5 208 aa15.24■□□□□ 0.03
GPC3-201ENST00000370818 SH2B1Q9NRF2 756 aaPredicted RBP15.24■□□□□ 0.03
GPC3-201ENST00000370818 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms