RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 SAGE1Q9NXZ1 904 aa19.57■□□□□ 0.72
RPF1-202ENST00000370656 RIMBP2O15034 1052 aa19.56■□□□□ 0.72
RPF1-202ENST00000370656 SF3B3Q15393 1217 aaKnown RBP19.56■□□□□ 0.72
RPF1-202ENST00000370656 ANKRD13DQ6ZTN6 518 aa19.56■□□□□ 0.72
RPF1-202ENST00000370656 ECE2O60344 883 aa19.55■□□□□ 0.72
RPF1-202ENST00000370656 RBM26Q5T8P6 1007 aaKnown RBP19.55■□□□□ 0.72
RPF1-202ENST00000370656 CELF1Q92879 486 aaKnown RBP19.55■□□□□ 0.72
RPF1-202ENST00000370656 FAM89AQ96GI7 184 aa19.55■□□□□ 0.72
RPF1-202ENST00000370656 ZIC5Q96T25 663 aa19.55■□□□□ 0.72
RPF1-202ENST00000370656 CHPF2Q9P2E5 772 aa19.55■□□□□ 0.72
RPF1-202ENST00000370656 G3V3G9 751 aa19.54■□□□□ 0.72
RPF1-202ENST00000370656 ZNF157P51786 506 aaPredicted RBP19.54■□□□□ 0.72
RPF1-202ENST00000370656 DCAF8Q5TAQ9 597 aa19.54■□□□□ 0.72
RPF1-202ENST00000370656 HDGFL1Q5TGJ6 251 aa19.54■□□□□ 0.72
RPF1-202ENST00000370656 SULF1Q8IWU6 871 aa19.54■□□□□ 0.72
RPF1-202ENST00000370656 DBF4Q9UBU7 674 aaPredicted RBP19.54■□□□□ 0.72
RPF1-202ENST00000370656 POLLQ9UGP5 575 aa19.54■□□□□ 0.72
RPF1-202ENST00000370656 FAM155AB1AL88 458 aaPredicted RBP19.53■□□□□ 0.72
RPF1-202ENST00000370656 CHL1O00533 1208 aa19.53■□□□□ 0.72
RPF1-202ENST00000370656 HOXB7P09629 217 aa19.53■□□□□ 0.72
RPF1-202ENST00000370656 HSP90B1P14625 803 aaKnown RBP19.53■□□□□ 0.72
RPF1-202ENST00000370656 GPSM2P81274 684 aa19.53■□□□□ 0.72
RPF1-202ENST00000370656 ZNF428Q96B54 188 aa19.53■□□□□ 0.72
RPF1-202ENST00000370656 ISCA1Q9BUE6 129 aa19.53■□□□□ 0.72
RPF1-202ENST00000370656 ZC3H12CQ9C0D7 883 aaKnown RBP19.53■□□□□ 0.72
RPF1-202ENST00000370656 LAS1LQ9Y4W2 734 aaKnown RBP19.53■□□□□ 0.72
RPF1-202ENST00000370656 ADM5C9JUS6 153 aa19.52■□□□□ 0.72
RPF1-202ENST00000370656 SOX10P56693 466 aa19.52■□□□□ 0.72
RPF1-202ENST00000370656 RPS8P62241 208 aaKnown RBP19.52■□□□□ 0.72
RPF1-202ENST00000370656 KIF23Q02241 960 aaPredicted RBP19.52■□□□□ 0.72
RPF1-202ENST00000370656 NEUROD2Q15784 382 aa19.52■□□□□ 0.72
RPF1-202ENST00000370656 DOK7Q18PE1 504 aa19.52■□□□□ 0.72
RPF1-202ENST00000370656 KIF4BQ2VIQ3 1234 aa19.52■□□□□ 0.72
RPF1-202ENST00000370656 DLK2Q6UY11 383 aa19.52■□□□□ 0.72
RPF1-202ENST00000370656 ATP5J2-PTCD1G3V325 749 aa19.51■□□□□ 0.71
RPF1-202ENST00000370656 EGFRP00533 1210 aa19.51■□□□□ 0.71
RPF1-202ENST00000370656 REM2Q8IYK8 340 aaPredicted RBP19.51■□□□□ 0.71
RPF1-202ENST00000370656 TBC1D16Q8TBP0 767 aa19.51■□□□□ 0.71
RPF1-202ENST00000370656 HYPKQ9NX55 129 aa19.51■□□□□ 0.71
RPF1-202ENST00000370656 RTL9Q8NET4 1388 aa19.5■□□□□ 0.71
RPF1-202ENST00000370656 IRS4O14654 1257 aaPredicted RBP19.5■□□□□ 0.71
RPF1-202ENST00000370656 TRPA1O75762 1119 aa19.5■□□□□ 0.71
RPF1-202ENST00000370656 KRT24Q2M2I5 525 aa19.5■□□□□ 0.71
RPF1-202ENST00000370656 SPINK5Q9NQ38 1064 aaPredicted RBP19.5■□□□□ 0.71
RPF1-202ENST00000370656 GGA3Q9NZ52 723 aa19.5■□□□□ 0.71
RPF1-202ENST00000370656 SCN9AQ15858 1988 aa19.5■□□□□ 0.71
RPF1-202ENST00000370656 VIL1P09327 827 aaKnown RBP19.49■□□□□ 0.71
RPF1-202ENST00000370656 TRIM28Q13263 835 aaKnown RBP19.49■□□□□ 0.71
RPF1-202ENST00000370656 RTL5Q5HYW3 569 aaPredicted RBP19.49■□□□□ 0.71
RPF1-202ENST00000370656 KCNQ5Q9NR82 932 aa19.49■□□□□ 0.71
RPF1-202ENST00000370656 RNF186Q9NXI6 227 aa19.49■□□□□ 0.71
RPF1-202ENST00000370656 ANKIB1Q9P2G1 1089 aa19.49■□□□□ 0.71
RPF1-202ENST00000370656 CENPBP07199 599 aaPredicted RBP19.48■□□□□ 0.71
RPF1-202ENST00000370656 SLC10A3P09131 477 aa19.48■□□□□ 0.71
RPF1-202ENST00000370656 YTHDC1Q96MU7 727 aaKnown RBP19.48■□□□□ 0.71
RPF1-202ENST00000370656 PODXL2Q9NZ53 605 aa19.48■□□□□ 0.71
RPF1-202ENST00000370656 PSME4Q14997 1843 aa19.47■□□□□ 0.71
RPF1-202ENST00000370656 UFL1O94874 794 aa19.47■□□□□ 0.71
RPF1-202ENST00000370656 CDCA5Q96FF9 252 aa19.47■□□□□ 0.71
RPF1-202ENST00000370656 GGA1Q9UJY5 639 aa19.47■□□□□ 0.71
RPF1-202ENST00000370656 DSG3P32926 999 aa19.46■□□□□ 0.71
RPF1-202ENST00000370656 FKBP1BP68106 108 aa19.46■□□□□ 0.71
RPF1-202ENST00000370656 GOLGA2Q08379 1002 aa19.46■□□□□ 0.71
RPF1-202ENST00000370656 RIC3Q7Z5B4 369 aa19.46■□□□□ 0.71
RPF1-202ENST00000370656 CCDC146Q8IYE0 955 aa19.46■□□□□ 0.71
RPF1-202ENST00000370656 ZBTB38Q8NAP3 1195 aaPredicted RBP19.46■□□□□ 0.71
RPF1-202ENST00000370656 AGBL3Q8NEM8 1001 aa19.46■□□□□ 0.71
RPF1-202ENST00000370656 ZNF609O15014 1411 aa19.45■□□□□ 0.7
RPF1-202ENST00000370656 RUNDC1Q96C34 613 aa19.45■□□□□ 0.7
RPF1-202ENST00000370656 CSRNP1Q96S65 589 aa19.45■□□□□ 0.7
RPF1-202ENST00000370656 COL4A1P02462 1669 aa19.45■□□□□ 0.7
RPF1-202ENST00000370656 ZNF280AP59817 542 aaPredicted RBP19.44■□□□□ 0.7
RPF1-202ENST00000370656 SCARF1Q14162 830 aa19.44■□□□□ 0.7
RPF1-202ENST00000370656 WDR43Q15061 677 aaKnown RBP eCLIP19.44■□□□□ 0.7
RPF1-202ENST00000370656 CCDC152Q4G0S7 254 aa19.44■□□□□ 0.7
RPF1-202ENST00000370656 ANGEL2Q5VTE6 544 aaKnown RBP19.44■□□□□ 0.7
RPF1-202ENST00000370656 RSBN1LQ6PCB5 846 aaPredicted RBP19.44■□□□□ 0.7
RPF1-202ENST00000370656 CTU1Q7Z7A3 348 aaKnown RBP19.44■□□□□ 0.7
RPF1-202ENST00000370656 TRIM35Q9UPQ4 493 aa19.44■□□□□ 0.7
RPF1-202ENST00000370656 PAPPA2Q9BXP8 1791 aa19.44■□□□□ 0.7
RPF1-202ENST00000370656 DUSP27Q5VZP5 1158 aa19.43■□□□□ 0.7
RPF1-202ENST00000370656 FAM9BQ8IZU0 186 aa19.43■□□□□ 0.7
RPF1-202ENST00000370656 USP17L8P0C7I0 530 aa19.42■□□□□ 0.7
RPF1-202ENST00000370656 SEC31BQ9NQW1 1179 aa19.42■□□□□ 0.7
RPF1-202ENST00000370656 ASTN2O75129 1339 aaPredicted RBP19.42■□□□□ 0.7
RPF1-202ENST00000370656 PITPNM2Q9BZ72 1349 aa19.42■□□□□ 0.7
RPF1-202ENST00000370656 PRPF38BQ5VTL8 546 aaKnown RBP19.41■□□□□ 0.7
RPF1-202ENST00000370656 RASAL3Q86YV0 1011 aa19.41■□□□□ 0.7
RPF1-202ENST00000370656 CCDC191Q8NCU4 936 aa19.41■□□□□ 0.7
RPF1-202ENST00000370656 MYOZ2Q9NPC6 264 aa19.41■□□□□ 0.7
RPF1-202ENST00000370656 XDHP47989 1333 aa19.41■□□□□ 0.7
RPF1-202ENST00000370656 PDE8AO60658 829 aa19.4■□□□□ 0.7
RPF1-202ENST00000370656 PKN2Q16513 984 aaKnown RBP19.4■□□□□ 0.7
RPF1-202ENST00000370656 PODNQ7Z5L7 613 aa19.4■□□□□ 0.7
RPF1-202ENST00000370656 ANKRD18AQ8IVF6 992 aa19.4■□□□□ 0.7
RPF1-202ENST00000370656 USP17L3A6NCW0 530 aa19.39■□□□□ 0.69
RPF1-202ENST00000370656 USP17L4A6NCW7 530 aa19.39■□□□□ 0.69
RPF1-202ENST00000370656 PCCAP05165 728 aaPredicted RBP19.39■□□□□ 0.69
RPF1-202ENST00000370656 ATP2B4P23634 1241 aa19.39■□□□□ 0.69
RPF1-202ENST00000370656 USP17L1Q7RTZ2 530 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms